LOCUS NM_001345668 1130 bp mRNA linear PLN 20-OCT-2022
DEFINITION Arabidopsis thaliana K-box region/MADS-box transcription factor
family protein (MAF5), mRNA.
ACCESSION NM_001345668
VERSION NM_001345668.1
DBLINK BioProject: PRJNA116
BioSample: SAMN03081427
KEYWORDS RefSeq.
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 1130)
AUTHORS Tabata,S., Kaneko,T., Nakamura,Y., Kotani,H., Kato,T., Asamizu,E.,
Miyajima,N., Sasamoto,S., Kimura,T., Hosouchi,T., Kawashima,K.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Naruo,K., Okumura,S., Shinpo,S., Takeuchi,C., Wada,T.,
Watanabe,A., Yamada,M., Yasuda,M., Sato,S., de la Bastide,M.,
Huang,E., Spiegel,L., Gnoj,L., O'Shaughnessy,A., Preston,R.,
Habermann,K., Murray,J., Johnson,D., Rohlfing,T., Nelson,J.,
Stoneking,T., Pepin,K., Spieth,J., Sekhon,M., Armstrong,J.,
Becker,M., Belter,E., Cordum,H., Cordes,M., Courtney,L.,
Courtney,W., Dante,M., Du,H., Edwards,J., Fryman,J., Haakensen,B.,
Lamar,E., Latreille,P., Leonard,S., Meyer,R., Mulvaney,E.,
Ozersky,P., Riley,A., Strowmatt,C., Wagner-McPherson,C., Wollam,A.,
Yoakum,M., Bell,M., Dedhia,N., Parnell,L., Shah,R., Rodriguez,M.,
See,L.H., Vil,D., Baker,J., Kirchoff,K., Toth,K., King,L.,
Bahret,A., Miller,B., Marra,M., Martienssen,R., McCombie,W.R.,
Wilson,R.K., Murphy,G., Bancroft,I., Volckaert,G., Wambutt,R.,
Dusterhoft,A., Stiekema,W., Pohl,T., Entian,K.D., Terryn,N.,
Hartley,N., Bent,E., Johnson,S., Langham,S.A., McCullagh,B.,
Robben,J., Grymonprez,B., Zimmermann,W., Ramsperger,U., Wedler,H.,
Balke,K., Wedler,E., Peters,S., van Staveren,M., Dirkse,W.,
Mooijman,P., Lankhorst,R.K., Weitzenegger,T., Bothe,G., Rose,M.,
Hauf,J., Berneiser,S., Hempel,S., Feldpausch,M., Lamberth,S.,
Villarroel,R., Gielen,J., Ardiles,W., Bents,O., Lemcke,K.,
Kolesov,G., Mayer,K., Rudd,S., Schoof,H., Schueller,C.,
Zaccaria,P., Mewes,H.W., Bevan,M. and Fransz,P.
CONSRTM Kazusa DNA Research Institute; Cold Spring Harbor and Washington
University in St Louis Sequencing Consortium; European Union
Arabidopsis Genome Sequencing Consortium
TITLE Sequence and analysis of chromosome 5 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 823-826 (2000)
PUBMED 11130714
REFERENCE 2 (bases 1 to 1130)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (19-OCT-2022) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 1130)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
REFERENCE 4 (bases 1 to 1130)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
COMMENT REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
This record is derived from an annotated genomic sequence
(NC_003076).
FEATURES Location/Qualifiers
source 1..1130
/organism="Arabidopsis thaliana"
/mol_type="mRNA"
/db_xref="taxon:3702"
/chromosome="5"
/ecotype="Columbia"
gene 1..1130
/gene="MAF5"
/locus_tag="AT5G65080"
/gene_synonym="AGAMOUS-like 68; AGL68; F15O5.4; F15O5_4;
MADS AFFECTING FLOWERING 5"
/note="Is upregulated during vernalization and regulates
flowering time. Encodes MADS-domain protein. Two variants
encoding proteins of 198 and 184 amino acids have been
reported."
/db_xref="Araport:AT5G65080"
/db_xref="GeneID:836632"
/db_xref="TAIR:AT5G65080"
CDS 147..722
/gene="MAF5"
/locus_tag="AT5G65080"
/gene_synonym="AGAMOUS-like 68; AGL68; F15O5.4; F15O5_4;
MADS AFFECTING FLOWERING 5"
/codon_start=1
/product="K-box region/MADS-box transcription factor
family protein"
/protein_id="NP_001330487.1"
/db_xref="GeneID:836632"
/db_xref="Araport:AT5G65080"
/db_xref="TAIR:AT5G65080"
/translation="MCRKSEAMGRRRVEIKRIENKSSRQVTFCKRRNGLMEKARQLSI
LCGSSVALFIVSSTGKLYNSSSGDSMAKIISRFKIQQADDPETLDLEDKTQDYLSHKE
LLEIVQRKIEEAKGDNVSIESLISMEEQLKSALSVIRARKTELLMELVKNLQDKVGKL
KKILETGDERAVMSPENSSGHSPPETLPLLK"
ORIGIN
1 agtaattggg gattaagtca tacaaaataa ttcatggatt gtgctagaaa acaactggaa
61 aaaaaagaag aaataaaaat gcaaaataat tcaggatctc cgaccagttt atacagacat
121 cagaattgaa gaaattaggg gattagatgt gtcggaagag tgaagccatg ggaagaagaa
181 gagtagagat caaacgaatt gagaacaaaa gcagtagaca agtcactttc tgtaagagac
241 gaaatggtct catggagaaa gctcgtcaac tctcaattct ctgtggatcc tccgtcgctc
301 ttttcatcgt ctcttccacc ggcaaactct acaactcctc ctccggcgac agcatggcca
361 agatcatcag tcgttttaaa atacaacaag ctgatgatcc tgaaaccttg gatcttgaag
421 acaaaactca ggattatctt tcacacaagg agttactaga aatagttcaa agaaagattg
481 aagaagcaaa aggggataat gtaagtatag aatctctaat ttccatggaa gagcagctca
541 agagtgctct gtctgtaatt agagctagga agacagagtt attgatggag cttgtgaaga
601 accttcagga taaggtgggg aagctgaaga aaattttgga aacaggggat gaaagagcag
661 taatgtcacc ggaaaatagc tctggccaca gcccaccgga gactctcccg cttctcaagt
721 aaccaccaat catcaacggc tgatttttca tcatcctgat tcaaaaaagg taaaaaaaat
781 tcatgtgtaa aaatcataaa gaagctacat gttttaaaat cctcttctcc ccctgcatac
841 ggataaattt atagaccaaa aatataatgt tttccctcaa ataagatatc gacctttgtg
901 ttaccttgga agacaggatc agaagtttcg aatgttttgt gtgttcttat ctgaaaaaaa
961 gggaaggtga tgagtttata aaagttttgc tttcttcagc gtgaagaacc ttgaggccaa
1021 aattagtaat tttgttattt aatcgcgcta cttgtgttac tttaccttcg tggcaaagtt
1081 actttgtacc ttagtaatga attttgctgt ttaatttgaa cataaaaatc
//