LOCUS NM_001345555 1462 bp mRNA linear PLN 20-OCT-2022
DEFINITION Arabidopsis thaliana basic helix-loop-helix (bHLH) DNA-binding
superfamily protein (AT5G62610), mRNA.
ACCESSION NM_001345555
VERSION NM_001345555.1
DBLINK BioProject: PRJNA116
BioSample: SAMN03081427
KEYWORDS RefSeq.
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 1462)
AUTHORS Tabata,S., Kaneko,T., Nakamura,Y., Kotani,H., Kato,T., Asamizu,E.,
Miyajima,N., Sasamoto,S., Kimura,T., Hosouchi,T., Kawashima,K.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Naruo,K., Okumura,S., Shinpo,S., Takeuchi,C., Wada,T.,
Watanabe,A., Yamada,M., Yasuda,M., Sato,S., de la Bastide,M.,
Huang,E., Spiegel,L., Gnoj,L., O'Shaughnessy,A., Preston,R.,
Habermann,K., Murray,J., Johnson,D., Rohlfing,T., Nelson,J.,
Stoneking,T., Pepin,K., Spieth,J., Sekhon,M., Armstrong,J.,
Becker,M., Belter,E., Cordum,H., Cordes,M., Courtney,L.,
Courtney,W., Dante,M., Du,H., Edwards,J., Fryman,J., Haakensen,B.,
Lamar,E., Latreille,P., Leonard,S., Meyer,R., Mulvaney,E.,
Ozersky,P., Riley,A., Strowmatt,C., Wagner-McPherson,C., Wollam,A.,
Yoakum,M., Bell,M., Dedhia,N., Parnell,L., Shah,R., Rodriguez,M.,
See,L.H., Vil,D., Baker,J., Kirchoff,K., Toth,K., King,L.,
Bahret,A., Miller,B., Marra,M., Martienssen,R., McCombie,W.R.,
Wilson,R.K., Murphy,G., Bancroft,I., Volckaert,G., Wambutt,R.,
Dusterhoft,A., Stiekema,W., Pohl,T., Entian,K.D., Terryn,N.,
Hartley,N., Bent,E., Johnson,S., Langham,S.A., McCullagh,B.,
Robben,J., Grymonprez,B., Zimmermann,W., Ramsperger,U., Wedler,H.,
Balke,K., Wedler,E., Peters,S., van Staveren,M., Dirkse,W.,
Mooijman,P., Lankhorst,R.K., Weitzenegger,T., Bothe,G., Rose,M.,
Hauf,J., Berneiser,S., Hempel,S., Feldpausch,M., Lamberth,S.,
Villarroel,R., Gielen,J., Ardiles,W., Bents,O., Lemcke,K.,
Kolesov,G., Mayer,K., Rudd,S., Schoof,H., Schueller,C.,
Zaccaria,P., Mewes,H.W., Bevan,M. and Fransz,P.
CONSRTM Kazusa DNA Research Institute; Cold Spring Harbor and Washington
University in St Louis Sequencing Consortium; European Union
Arabidopsis Genome Sequencing Consortium
TITLE Sequence and analysis of chromosome 5 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 823-826 (2000)
PUBMED 11130714
REFERENCE 2 (bases 1 to 1462)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (19-OCT-2022) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 1462)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
REFERENCE 4 (bases 1 to 1462)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
COMMENT REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
This record is derived from an annotated genomic sequence
(NC_003076).
FEATURES Location/Qualifiers
source 1..1462
/organism="Arabidopsis thaliana"
/mol_type="mRNA"
/db_xref="taxon:3702"
/chromosome="5"
/ecotype="Columbia"
gene 1..1462
/locus_tag="AT5G62610"
/gene_synonym="MRG21.2; MRG21_2"
/db_xref="Araport:AT5G62610"
/db_xref="GeneID:836382"
/db_xref="TAIR:AT5G62610"
CDS 348..1193
/locus_tag="AT5G62610"
/gene_synonym="MRG21.2; MRG21_2"
/codon_start=1
/product="basic helix-loop-helix (bHLH) DNA-binding
superfamily protein"
/protein_id="NP_001330306.1"
/db_xref="GeneID:836382"
/db_xref="Araport:AT5G62610"
/db_xref="TAIR:AT5G62610"
/translation="MDPPLVNDSSFSAANPSSYTLSEIWPFPVNDAVRSGLRLAVNSG
RVFTRSEHSGNKDVSAAEESTVTDLTAGWGSRKTRDLNSEDDSSKMVSSSSSGNELKE
SGDKKRKLCGSESGNGDGSMRPEGETSSGGGGSKATEQKNKPEPPKDYIHVRARRGQA
TDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQVEFLSM
KLEVVNSGASTGPTIGVFPSGDLGTLPIDVHRTIYEQQEANETRVSQPEWLHMQVDGN
FNRTT"
ORIGIN
1 aaaaaagctt tatgggaaaa atggaaagag aggaattggg cttcatgtgt gacacctttg
61 catccagaaa cggcaaaata tttgatgtaa gctgtgtaat taatgagatt ttctgaaagt
121 attggtgata aatcatcttc cattgcatac tagtggcgca ttatcactac ccacatctgt
181 cttaccttct ccgatctctc tctctatttg tccacctcac acacaaccct ataaacaaga
241 caagacctcg caaagctcaa accttttcct tctttttttc tatcaagttc ctcacttctc
301 ggatccgggt cctaaatctg ggtcaaccct ttttacgatc atcggaaatg gaccctccac
361 tagtgaacga ttcctccttc tctgcagcta atccttcttc ttacactctc tccgagattt
421 ggcctttccc tgtaaacgac gccgttcgct ctggtctccg tttagctgtt aactccggtc
481 gagtctttac tcgctctgaa cattccggca ataaagacgt ctccgcggct gaggaatcta
541 cagtcaccga tctaactgct ggctggggaa gtagaaagac tagagatttg aactctgagg
601 atgattcttc aaagatggtt tcttccagca gcagtggtaa tgaattgaaa gaatcagggg
661 ataagaaaag aaaactgtgt ggatctgaaa gtggaaatgg agatggttcg atgagacctg
721 aaggcgaaac aagttcgggt ggtggtggaa gcaaagcaac ggaacagaag aacaaacctg
781 agccaccaaa ggattatatt catgtgagag caagaagagg acaagctact gaccggcata
841 gtttagcaga gcgagctaga agagaaaaga tcagtgagaa gatgacagct cttcaagata
901 taattccagg atgtaataag ataatcggaa aagcccttgt gctcgatgag attatcaatt
961 atattcagtc attgcagcgg caagttgagt ttctatcaat gaagctagaa gttgttaact
1021 cgggtgcaag tactggtccg acaataggag tttttccttc cggtgatctc gggactttac
1081 cgattgacgt tcatcgaaca atatacgagc aacaagaagc taatgaaacc cgagtatctc
1141 aaccggagtg gctccatatg caggttgatg ggaactttaa ccgaaccaca taaaaaagag
1201 tctttctctg attgatggat gtgttttgta ggcagtaaaa atgaatgcaa ccctttattt
1261 tttatcctat gcgtgtgtat cattttgctg ttatatcata agatagaata tgagagtgac
1321 cagagagatt aacactttat aaaacattgt tgtattgtcc tattatataa cttgtaacaa
1381 ttgattcagt aacatatgtt ggtcttaaat cttgtccttt gtataatctt tatgttatga
1441 tgaatcaatg atacgttttt tt
//