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Arabidopsis thaliana GPI-anchored adhesin-like protein (TRM8), mRNA

NCBI Reference Sequence: NM_001343986.1

FASTA Graphics 

LOCUS       NM_001343986            3762 bp    mRNA    linear   PLN 20-OCT-2022
DEFINITION  Arabidopsis thaliana GPI-anchored adhesin-like protein (TRM8),
            mRNA.
ACCESSION   NM_001343986
VERSION     NM_001343986.1
DBLINK      BioProject: PRJNA116
            BioSample: SAMN03081427
KEYWORDS    RefSeq.
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 3762)
  AUTHORS   Tabata,S., Kaneko,T., Nakamura,Y., Kotani,H., Kato,T., Asamizu,E.,
            Miyajima,N., Sasamoto,S., Kimura,T., Hosouchi,T., Kawashima,K.,
            Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
            Nakazaki,N., Naruo,K., Okumura,S., Shinpo,S., Takeuchi,C., Wada,T.,
            Watanabe,A., Yamada,M., Yasuda,M., Sato,S., de la Bastide,M.,
            Huang,E., Spiegel,L., Gnoj,L., O'Shaughnessy,A., Preston,R.,
            Habermann,K., Murray,J., Johnson,D., Rohlfing,T., Nelson,J.,
            Stoneking,T., Pepin,K., Spieth,J., Sekhon,M., Armstrong,J.,
            Becker,M., Belter,E., Cordum,H., Cordes,M., Courtney,L.,
            Courtney,W., Dante,M., Du,H., Edwards,J., Fryman,J., Haakensen,B.,
            Lamar,E., Latreille,P., Leonard,S., Meyer,R., Mulvaney,E.,
            Ozersky,P., Riley,A., Strowmatt,C., Wagner-McPherson,C., Wollam,A.,
            Yoakum,M., Bell,M., Dedhia,N., Parnell,L., Shah,R., Rodriguez,M.,
            See,L.H., Vil,D., Baker,J., Kirchoff,K., Toth,K., King,L.,
            Bahret,A., Miller,B., Marra,M., Martienssen,R., McCombie,W.R.,
            Wilson,R.K., Murphy,G., Bancroft,I., Volckaert,G., Wambutt,R.,
            Dusterhoft,A., Stiekema,W., Pohl,T., Entian,K.D., Terryn,N.,
            Hartley,N., Bent,E., Johnson,S., Langham,S.A., McCullagh,B.,
            Robben,J., Grymonprez,B., Zimmermann,W., Ramsperger,U., Wedler,H.,
            Balke,K., Wedler,E., Peters,S., van Staveren,M., Dirkse,W.,
            Mooijman,P., Lankhorst,R.K., Weitzenegger,T., Bothe,G., Rose,M.,
            Hauf,J., Berneiser,S., Hempel,S., Feldpausch,M., Lamberth,S.,
            Villarroel,R., Gielen,J., Ardiles,W., Bents,O., Lemcke,K.,
            Kolesov,G., Mayer,K., Rudd,S., Schoof,H., Schueller,C.,
            Zaccaria,P., Mewes,H.W., Bevan,M. and Fransz,P.
  CONSRTM   Kazusa DNA Research Institute; Cold Spring Harbor and Washington
            University in St Louis Sequencing Consortium; European Union
            Arabidopsis Genome Sequencing Consortium
  TITLE     Sequence and analysis of chromosome 5 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 408 (6814), 823-826 (2000)
   PUBMED   11130714
REFERENCE   2  (bases 1 to 3762)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 3762)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   4  (bases 1 to 3762)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
            This record is derived from an annotated genomic sequence
            (NC_003076).
FEATURES             Location/Qualifiers
     source          1..3762
                     /organism="Arabidopsis thaliana"
                     /mol_type="mRNA"
                     /db_xref="taxon:3702"
                     /chromosome="5"
                     /ecotype="Columbia"
     gene            1..3762
                     /gene="TRM8"
                     /locus_tag="AT5G26910"
                     /gene_synonym="F2P16.18; F2P16_18; TON1 Recruiting Motif
                     8"
                     /db_xref="Araport:AT5G26910"
                     /db_xref="GeneID:832749"
                     /db_xref="TAIR:AT5G26910"
     CDS             881..3442
                     /gene="TRM8"
                     /locus_tag="AT5G26910"
                     /gene_synonym="F2P16.18; F2P16_18; TON1 Recruiting Motif
                     8"
                     /codon_start=1
                     /product="GPI-anchored adhesin-like protein"
                     /protein_id="NP_001330135.1"
                     /db_xref="GeneID:832749"
                     /db_xref="Araport:AT5G26910"
                     /db_xref="TAIR:AT5G26910"
                     /translation="MEVVERKRSRGGFLNLFDWHGKSRKKLFSGSTSELSEESKQPAQ
                     NLLKSRVSLIEVDEIGKSSSNNQRSDSSCCASSVTSDDGQGTRAPSVVARLMGLESLP
                     VPNVQEPRLNPDLDPFLLRPSQNTNRWDAYENLGYVNLRSDYDGISWDHLDSRTNNGR
                     NQPIERFQSETFPPRSAKPICVTNNRHLSPIRSPGFVPSRNPIYVMEAASRMIEPSPR
                     MVARTRFSPSNSPSSVPMRIQDLREKLEAAQKVSSRQNSNDTFNLKYPSGKHNEKRIT
                     TSLTTPSTSKFMGKSSTDGLKGKVKPSYVSAQAKAGTTPLSVTRNSANQKEKADAKKC
                     VVKSQNALRGAPISMGKNMFKQNNQKQNCRDNQPSMTSVLNQKSSKVNNKVVNKVPVE
                     SGSISKQLGLSTASAEKNTSLSLSRKKTLPRSKKLPNGMQKSGISDDKRTKRSENMIK
                     CNITIDGGLNKGKDDRKKEMDVISFTFSSPIKGLSSDSLSSTQGIGQDTDSAVSFNIG
                     GDSLNALLEQKLRELTSKLESSSCSLTQEEPSYSIPMDEMNGMISFSSEYEKSTQNGL
                     RKVLSESESVSDCTSFYDKQKFQIQAEEHEVSSISTVTEADDLRSSCSKGFSDCRQTA
                     EYGTIQSSSDQELTWVSLNESHQAQDESELSESVVTLSYSEAEERLDWEFEYISEILG
                     SDQLMVKEYALGMATDVLPASLFDEMEGRGEVTAAKIKRKTLFDFVNKCLALRCEQMF
                     MGSCRGLLGKGGFLFEQRDWLAEELNREIHGLKKMREMMMDELVDKEMSSFEGRWLDF
                     ERETYEEGIDIEGEIVSTLVDDLVNDLVSGTQRRTLRQREGVVSALVEPHLLSAF"
ORIGIN      
        1 ggagtgagaa actgggaaaa ttcaaaacac tctgtttctc tctctcctct cactcttcgt
       61 tctcttctct cgtcacatca atccacactg tgaagtatct gttttttttt ttttttagtt
      121 tttcaagttc tctgctgcta ctattggtct gtcttctcta cctaaatccc aaatcccaaa
      181 tcccaaatct agtatcatct aaccttactt cgtcctcttt tgatttaacc tctttctctg
      241 atctgaccca tttctcaaga atctctcttt cttcttaatt cattggtgtt ttaacctttt
      301 catcgattcc aattctcaat tgttgtctgt ttgaggaaca caagaccccc ccttccccta
      361 gtgttgctcg cttctagggc tagatcttct gggaacgcga aagtttaggt ctttaatcga
      421 ttttgtgcgt aaacagtccg cagcatttct gggtttttgt tcccgttgct acattttgtt
      481 ggtaacgtgt cgaattcgag aatttgattg gtttcttcac aagggtctct ggagttaacc
      541 caaaattgga atgagctcat aagttaaagt tgaggtcttt gtaaccttta ggtaaatttg
      601 ggttcatgtg tgatctgatt tctttgaatt tcttaaaccg attcaagttt tggtctttca
      661 cagctctctt ctgtattatc ctgtggtggt ggtctcttct gaatgtgaat tcaaattaac
      721 ctgtcttaat ctccatttag ttcagctaga agttgggtta atttattgag gtttatgcaa
      781 tttttggtcc ggtttgtttt ggaatcaaga ttatttttcg ctgcatcttg cagtccagga
      841 cagtgattca gtgattgtgt tatctgtaga tgaactaaaa atggaggttg ttgagaggaa
      901 acgatccaga ggagggtttt taaatttatt tgattggcat ggaaaatccc gcaagaagct
      961 cttctccggc agcacctcag aactctcaga agaatcaaag cagcctgcac aaaacctctt
     1021 gaagtcgagg gtttctctta ttgaggttga tgagattgga aagagttcaa gtaacaacca
     1081 gagaagtgac tcgagctgtt gtgcatcttc agtaaccagt gatgatggac aggggacaag
     1141 agccccgagt gtggttgcga ggcttatggg tttagagtct ctaccggtac caaatgtcca
     1201 ggaacctcga cttaatcccg atcttgatcc gttcttactc agaccttcac aaaacactaa
     1261 cagatgggat gcatatgaga atcttggtta tgtaaatctc cgtagtgact atgatggtat
     1321 ttcttgggac catttggatt ctagaacgaa taatgggcgc aaccaaccga ttgaacggtt
     1381 tcagtctgag acttttcctc ccaggtcagc taaaccgata tgtgttacca acaatagaca
     1441 cctgtctcct atccggagtc ctgggtttgt cccatccagg aaccctattt atgttatgga
     1501 agcggcttca agaatgattg aaccaagtcc taggatggtt gctagaacac ggttttcgcc
     1561 atcgaattct ccttcatcag ttcctatgag gattcaagat ttaagagaga aattagaagc
     1621 tgcacagaaa gtgtctagcc gtcaaaactc caatgatacc ttcaacctta agtacccaag
     1681 tggaaagcac aacgagaaga gaattacaac atcactcacg acaccgtcaa ctagtaagtt
     1741 catggggaaa agcagtactg atggtttgaa gggtaaagtg aagccatctt atgtatccgc
     1801 acaagcaaag gccggtacaa cgcccttaag tgtcaccaga aactctgcaa accaaaagga
     1861 gaaggcagac gctaaaaagt gcgtagtcaa aagccagaat gctctcagag gagctcccat
     1921 tagcatggga aagaatatgt ttaagcagaa taaccagaaa cagaactgca gagacaacca
     1981 accttcgatg acctctgttt tgaaccaaaa aagcagcaaa gtaaataaca aagttgtaaa
     2041 caaggttcca gtggaaagtg gatcgatatc aaagcagttg ggtttatcaa cggcctcggc
     2101 ggaaaagaat acttctttat ctttgtcacg caaaaagact cttccccgga gcaaaaagct
     2161 cccaaatggg atgcaaaaat ctggaatctc tgatgataaa cggaccaaaa ggagcgaaaa
     2221 tatgatcaaa tgtaacatca ccattgatgg tggcttgaac aaaggtaaag atgatcggaa
     2281 aaaggaaatg gatgtgattt cattcacatt ctcatctccc atcaaaggtt tatcttctga
     2341 ttcattatcc tctactcaag gaattggtca agacacagac tctgcagtta gtttcaatat
     2401 tggcggcgat tccttaaatg ctctgttgga gcaaaagctc agagagctga cttctaagct
     2461 tgagtcttct agctgtagcc tgacccaaga agagccttca tattccattc caatggatga
     2521 gatgaacggg atgatttcat tttcatcaga atatgaaaag tcaacccaaa acggtctgcg
     2581 taaagtttta tcagagagtg aatctgtttc tgactgcacc tcattctatg acaaacaaaa
     2641 attccagata caagcagaag agcacgaagt tagcagcatt agcactgtga cggaagcaga
     2701 tgatctaaga agctcttgca gcaagggttt ctcagattgc agacagaccg cagaatatgg
     2761 gacaatacag tcctcatcag atcaagaact cacctgggtt tcattaaatg agtcgcacca
     2821 agcacaagac gagtccgagc tctcagaatc tgtggtaaca ctgagttact cagaagccga
     2881 agaaaggctc gactgggagt tcgagtacat atccgagatc ctcgggtctg accaactgat
     2941 ggtgaaagaa tatgctttgg ggatggccac tgacgtatta cctgcgagcc tctttgatga
     3001 aatggaaggc cgaggagaag taacagcagc caaaatcaag agaaagacac tgtttgattt
     3061 tgtgaataag tgcttagcgc tcagatgcga gcagatgttt atgggtagct gcagagggct
     3121 attggggaaa ggcgggtttt tgtttgagca aagagattgg ttagcagaag aactgaacag
     3181 agagattcat gggttgaaga agatgagaga gatgatgatg gacgagcttg ttgacaaaga
     3241 gatgagcagt ttcgaaggga gatggcttga tttcgagaga gagacgtatg aagaaggcat
     3301 tgacattgag ggagagatag tctctacgtt ggtagatgat ttagttaatg atcttgtctc
     3361 aggtactcaa agaagaacat tgaggcaaag ggaaggggta gtttctgctt tagttgagcc
     3421 tcatcttctc tcggcattct agatgcttct tctaatagtt tctctgacat gagaattgag
     3481 ataaagtgaa agtagccaac atcgaggaga attttctcac aatgtaattc acgagaattc
     3541 cttattttat gtttctactt ctattgaaaa tgcaaataat atgatcattt tctttcattc
     3601 gttctgatgt aactagtggt cctcaagcat atgtaagact ttggttctgc aagaaaatcc
     3661 aaaacagagc ctttgatggg gaaaatttcg aatctttttg aatcgaaaag agttgttctt
     3721 tctcaacaac aaataaagct tcaataagca tcaaaatcac ag
//
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Reference sequence information

More about the TRM8 gene

  • TRM8 gene
    Also Known As: AT5G26910, F2P16.18, F2...

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