LOCUS NM_001343986 3762 bp mRNA linear PLN 20-OCT-2022
DEFINITION Arabidopsis thaliana GPI-anchored adhesin-like protein (TRM8),
mRNA.
ACCESSION NM_001343986
VERSION NM_001343986.1
DBLINK BioProject: PRJNA116
BioSample: SAMN03081427
KEYWORDS RefSeq.
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 3762)
AUTHORS Tabata,S., Kaneko,T., Nakamura,Y., Kotani,H., Kato,T., Asamizu,E.,
Miyajima,N., Sasamoto,S., Kimura,T., Hosouchi,T., Kawashima,K.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Naruo,K., Okumura,S., Shinpo,S., Takeuchi,C., Wada,T.,
Watanabe,A., Yamada,M., Yasuda,M., Sato,S., de la Bastide,M.,
Huang,E., Spiegel,L., Gnoj,L., O'Shaughnessy,A., Preston,R.,
Habermann,K., Murray,J., Johnson,D., Rohlfing,T., Nelson,J.,
Stoneking,T., Pepin,K., Spieth,J., Sekhon,M., Armstrong,J.,
Becker,M., Belter,E., Cordum,H., Cordes,M., Courtney,L.,
Courtney,W., Dante,M., Du,H., Edwards,J., Fryman,J., Haakensen,B.,
Lamar,E., Latreille,P., Leonard,S., Meyer,R., Mulvaney,E.,
Ozersky,P., Riley,A., Strowmatt,C., Wagner-McPherson,C., Wollam,A.,
Yoakum,M., Bell,M., Dedhia,N., Parnell,L., Shah,R., Rodriguez,M.,
See,L.H., Vil,D., Baker,J., Kirchoff,K., Toth,K., King,L.,
Bahret,A., Miller,B., Marra,M., Martienssen,R., McCombie,W.R.,
Wilson,R.K., Murphy,G., Bancroft,I., Volckaert,G., Wambutt,R.,
Dusterhoft,A., Stiekema,W., Pohl,T., Entian,K.D., Terryn,N.,
Hartley,N., Bent,E., Johnson,S., Langham,S.A., McCullagh,B.,
Robben,J., Grymonprez,B., Zimmermann,W., Ramsperger,U., Wedler,H.,
Balke,K., Wedler,E., Peters,S., van Staveren,M., Dirkse,W.,
Mooijman,P., Lankhorst,R.K., Weitzenegger,T., Bothe,G., Rose,M.,
Hauf,J., Berneiser,S., Hempel,S., Feldpausch,M., Lamberth,S.,
Villarroel,R., Gielen,J., Ardiles,W., Bents,O., Lemcke,K.,
Kolesov,G., Mayer,K., Rudd,S., Schoof,H., Schueller,C.,
Zaccaria,P., Mewes,H.W., Bevan,M. and Fransz,P.
CONSRTM Kazusa DNA Research Institute; Cold Spring Harbor and Washington
University in St Louis Sequencing Consortium; European Union
Arabidopsis Genome Sequencing Consortium
TITLE Sequence and analysis of chromosome 5 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 823-826 (2000)
PUBMED 11130714
REFERENCE 2 (bases 1 to 3762)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (19-OCT-2022) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 3762)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
REFERENCE 4 (bases 1 to 3762)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
COMMENT REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
This record is derived from an annotated genomic sequence
(NC_003076).
FEATURES Location/Qualifiers
source 1..3762
/organism="Arabidopsis thaliana"
/mol_type="mRNA"
/db_xref="taxon:3702"
/chromosome="5"
/ecotype="Columbia"
gene 1..3762
/gene="TRM8"
/locus_tag="AT5G26910"
/gene_synonym="F2P16.18; F2P16_18; TON1 Recruiting Motif
8"
/db_xref="Araport:AT5G26910"
/db_xref="GeneID:832749"
/db_xref="TAIR:AT5G26910"
CDS 881..3442
/gene="TRM8"
/locus_tag="AT5G26910"
/gene_synonym="F2P16.18; F2P16_18; TON1 Recruiting Motif
8"
/codon_start=1
/product="GPI-anchored adhesin-like protein"
/protein_id="NP_001330135.1"
/db_xref="GeneID:832749"
/db_xref="Araport:AT5G26910"
/db_xref="TAIR:AT5G26910"
/translation="MEVVERKRSRGGFLNLFDWHGKSRKKLFSGSTSELSEESKQPAQ
NLLKSRVSLIEVDEIGKSSSNNQRSDSSCCASSVTSDDGQGTRAPSVVARLMGLESLP
VPNVQEPRLNPDLDPFLLRPSQNTNRWDAYENLGYVNLRSDYDGISWDHLDSRTNNGR
NQPIERFQSETFPPRSAKPICVTNNRHLSPIRSPGFVPSRNPIYVMEAASRMIEPSPR
MVARTRFSPSNSPSSVPMRIQDLREKLEAAQKVSSRQNSNDTFNLKYPSGKHNEKRIT
TSLTTPSTSKFMGKSSTDGLKGKVKPSYVSAQAKAGTTPLSVTRNSANQKEKADAKKC
VVKSQNALRGAPISMGKNMFKQNNQKQNCRDNQPSMTSVLNQKSSKVNNKVVNKVPVE
SGSISKQLGLSTASAEKNTSLSLSRKKTLPRSKKLPNGMQKSGISDDKRTKRSENMIK
CNITIDGGLNKGKDDRKKEMDVISFTFSSPIKGLSSDSLSSTQGIGQDTDSAVSFNIG
GDSLNALLEQKLRELTSKLESSSCSLTQEEPSYSIPMDEMNGMISFSSEYEKSTQNGL
RKVLSESESVSDCTSFYDKQKFQIQAEEHEVSSISTVTEADDLRSSCSKGFSDCRQTA
EYGTIQSSSDQELTWVSLNESHQAQDESELSESVVTLSYSEAEERLDWEFEYISEILG
SDQLMVKEYALGMATDVLPASLFDEMEGRGEVTAAKIKRKTLFDFVNKCLALRCEQMF
MGSCRGLLGKGGFLFEQRDWLAEELNREIHGLKKMREMMMDELVDKEMSSFEGRWLDF
ERETYEEGIDIEGEIVSTLVDDLVNDLVSGTQRRTLRQREGVVSALVEPHLLSAF"
ORIGIN
1 ggagtgagaa actgggaaaa ttcaaaacac tctgtttctc tctctcctct cactcttcgt
61 tctcttctct cgtcacatca atccacactg tgaagtatct gttttttttt ttttttagtt
121 tttcaagttc tctgctgcta ctattggtct gtcttctcta cctaaatccc aaatcccaaa
181 tcccaaatct agtatcatct aaccttactt cgtcctcttt tgatttaacc tctttctctg
241 atctgaccca tttctcaaga atctctcttt cttcttaatt cattggtgtt ttaacctttt
301 catcgattcc aattctcaat tgttgtctgt ttgaggaaca caagaccccc ccttccccta
361 gtgttgctcg cttctagggc tagatcttct gggaacgcga aagtttaggt ctttaatcga
421 ttttgtgcgt aaacagtccg cagcatttct gggtttttgt tcccgttgct acattttgtt
481 ggtaacgtgt cgaattcgag aatttgattg gtttcttcac aagggtctct ggagttaacc
541 caaaattgga atgagctcat aagttaaagt tgaggtcttt gtaaccttta ggtaaatttg
601 ggttcatgtg tgatctgatt tctttgaatt tcttaaaccg attcaagttt tggtctttca
661 cagctctctt ctgtattatc ctgtggtggt ggtctcttct gaatgtgaat tcaaattaac
721 ctgtcttaat ctccatttag ttcagctaga agttgggtta atttattgag gtttatgcaa
781 tttttggtcc ggtttgtttt ggaatcaaga ttatttttcg ctgcatcttg cagtccagga
841 cagtgattca gtgattgtgt tatctgtaga tgaactaaaa atggaggttg ttgagaggaa
901 acgatccaga ggagggtttt taaatttatt tgattggcat ggaaaatccc gcaagaagct
961 cttctccggc agcacctcag aactctcaga agaatcaaag cagcctgcac aaaacctctt
1021 gaagtcgagg gtttctctta ttgaggttga tgagattgga aagagttcaa gtaacaacca
1081 gagaagtgac tcgagctgtt gtgcatcttc agtaaccagt gatgatggac aggggacaag
1141 agccccgagt gtggttgcga ggcttatggg tttagagtct ctaccggtac caaatgtcca
1201 ggaacctcga cttaatcccg atcttgatcc gttcttactc agaccttcac aaaacactaa
1261 cagatgggat gcatatgaga atcttggtta tgtaaatctc cgtagtgact atgatggtat
1321 ttcttgggac catttggatt ctagaacgaa taatgggcgc aaccaaccga ttgaacggtt
1381 tcagtctgag acttttcctc ccaggtcagc taaaccgata tgtgttacca acaatagaca
1441 cctgtctcct atccggagtc ctgggtttgt cccatccagg aaccctattt atgttatgga
1501 agcggcttca agaatgattg aaccaagtcc taggatggtt gctagaacac ggttttcgcc
1561 atcgaattct ccttcatcag ttcctatgag gattcaagat ttaagagaga aattagaagc
1621 tgcacagaaa gtgtctagcc gtcaaaactc caatgatacc ttcaacctta agtacccaag
1681 tggaaagcac aacgagaaga gaattacaac atcactcacg acaccgtcaa ctagtaagtt
1741 catggggaaa agcagtactg atggtttgaa gggtaaagtg aagccatctt atgtatccgc
1801 acaagcaaag gccggtacaa cgcccttaag tgtcaccaga aactctgcaa accaaaagga
1861 gaaggcagac gctaaaaagt gcgtagtcaa aagccagaat gctctcagag gagctcccat
1921 tagcatggga aagaatatgt ttaagcagaa taaccagaaa cagaactgca gagacaacca
1981 accttcgatg acctctgttt tgaaccaaaa aagcagcaaa gtaaataaca aagttgtaaa
2041 caaggttcca gtggaaagtg gatcgatatc aaagcagttg ggtttatcaa cggcctcggc
2101 ggaaaagaat acttctttat ctttgtcacg caaaaagact cttccccgga gcaaaaagct
2161 cccaaatggg atgcaaaaat ctggaatctc tgatgataaa cggaccaaaa ggagcgaaaa
2221 tatgatcaaa tgtaacatca ccattgatgg tggcttgaac aaaggtaaag atgatcggaa
2281 aaaggaaatg gatgtgattt cattcacatt ctcatctccc atcaaaggtt tatcttctga
2341 ttcattatcc tctactcaag gaattggtca agacacagac tctgcagtta gtttcaatat
2401 tggcggcgat tccttaaatg ctctgttgga gcaaaagctc agagagctga cttctaagct
2461 tgagtcttct agctgtagcc tgacccaaga agagccttca tattccattc caatggatga
2521 gatgaacggg atgatttcat tttcatcaga atatgaaaag tcaacccaaa acggtctgcg
2581 taaagtttta tcagagagtg aatctgtttc tgactgcacc tcattctatg acaaacaaaa
2641 attccagata caagcagaag agcacgaagt tagcagcatt agcactgtga cggaagcaga
2701 tgatctaaga agctcttgca gcaagggttt ctcagattgc agacagaccg cagaatatgg
2761 gacaatacag tcctcatcag atcaagaact cacctgggtt tcattaaatg agtcgcacca
2821 agcacaagac gagtccgagc tctcagaatc tgtggtaaca ctgagttact cagaagccga
2881 agaaaggctc gactgggagt tcgagtacat atccgagatc ctcgggtctg accaactgat
2941 ggtgaaagaa tatgctttgg ggatggccac tgacgtatta cctgcgagcc tctttgatga
3001 aatggaaggc cgaggagaag taacagcagc caaaatcaag agaaagacac tgtttgattt
3061 tgtgaataag tgcttagcgc tcagatgcga gcagatgttt atgggtagct gcagagggct
3121 attggggaaa ggcgggtttt tgtttgagca aagagattgg ttagcagaag aactgaacag
3181 agagattcat gggttgaaga agatgagaga gatgatgatg gacgagcttg ttgacaaaga
3241 gatgagcagt ttcgaaggga gatggcttga tttcgagaga gagacgtatg aagaaggcat
3301 tgacattgag ggagagatag tctctacgtt ggtagatgat ttagttaatg atcttgtctc
3361 aggtactcaa agaagaacat tgaggcaaag ggaaggggta gtttctgctt tagttgagcc
3421 tcatcttctc tcggcattct agatgcttct tctaatagtt tctctgacat gagaattgag
3481 ataaagtgaa agtagccaac atcgaggaga attttctcac aatgtaattc acgagaattc
3541 cttattttat gtttctactt ctattgaaaa tgcaaataat atgatcattt tctttcattc
3601 gttctgatgt aactagtggt cctcaagcat atgtaagact ttggttctgc aagaaaatcc
3661 aaaacagagc ctttgatggg gaaaatttcg aatctttttg aatcgaaaag agttgttctt
3721 tctcaacaac aaataaagct tcaataagca tcaaaatcac ag
//