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Arabidopsis thaliana Transmembrane CLPTM1 family protein (AT5G08500), mRNA

NCBI Reference Sequence: NM_001343015.1

FASTA Graphics 

LOCUS       NM_001343015            2380 bp    mRNA    linear   PLN 20-OCT-2022
DEFINITION  Arabidopsis thaliana Transmembrane CLPTM1 family protein
            (AT5G08500), mRNA.
ACCESSION   NM_001343015
VERSION     NM_001343015.1
DBLINK      BioProject: PRJNA116
            BioSample: SAMN03081427
KEYWORDS    RefSeq.
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 2380)
  AUTHORS   Tabata,S., Kaneko,T., Nakamura,Y., Kotani,H., Kato,T., Asamizu,E.,
            Miyajima,N., Sasamoto,S., Kimura,T., Hosouchi,T., Kawashima,K.,
            Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
            Nakazaki,N., Naruo,K., Okumura,S., Shinpo,S., Takeuchi,C., Wada,T.,
            Watanabe,A., Yamada,M., Yasuda,M., Sato,S., de la Bastide,M.,
            Huang,E., Spiegel,L., Gnoj,L., O'Shaughnessy,A., Preston,R.,
            Habermann,K., Murray,J., Johnson,D., Rohlfing,T., Nelson,J.,
            Stoneking,T., Pepin,K., Spieth,J., Sekhon,M., Armstrong,J.,
            Becker,M., Belter,E., Cordum,H., Cordes,M., Courtney,L.,
            Courtney,W., Dante,M., Du,H., Edwards,J., Fryman,J., Haakensen,B.,
            Lamar,E., Latreille,P., Leonard,S., Meyer,R., Mulvaney,E.,
            Ozersky,P., Riley,A., Strowmatt,C., Wagner-McPherson,C., Wollam,A.,
            Yoakum,M., Bell,M., Dedhia,N., Parnell,L., Shah,R., Rodriguez,M.,
            See,L.H., Vil,D., Baker,J., Kirchoff,K., Toth,K., King,L.,
            Bahret,A., Miller,B., Marra,M., Martienssen,R., McCombie,W.R.,
            Wilson,R.K., Murphy,G., Bancroft,I., Volckaert,G., Wambutt,R.,
            Dusterhoft,A., Stiekema,W., Pohl,T., Entian,K.D., Terryn,N.,
            Hartley,N., Bent,E., Johnson,S., Langham,S.A., McCullagh,B.,
            Robben,J., Grymonprez,B., Zimmermann,W., Ramsperger,U., Wedler,H.,
            Balke,K., Wedler,E., Peters,S., van Staveren,M., Dirkse,W.,
            Mooijman,P., Lankhorst,R.K., Weitzenegger,T., Bothe,G., Rose,M.,
            Hauf,J., Berneiser,S., Hempel,S., Feldpausch,M., Lamberth,S.,
            Villarroel,R., Gielen,J., Ardiles,W., Bents,O., Lemcke,K.,
            Kolesov,G., Mayer,K., Rudd,S., Schoof,H., Schueller,C.,
            Zaccaria,P., Mewes,H.W., Bevan,M. and Fransz,P.
  CONSRTM   Kazusa DNA Research Institute; Cold Spring Harbor and Washington
            University in St Louis Sequencing Consortium; European Union
            Arabidopsis Genome Sequencing Consortium
  TITLE     Sequence and analysis of chromosome 5 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 408 (6814), 823-826 (2000)
   PUBMED   11130714
REFERENCE   2  (bases 1 to 2380)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 2380)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   4  (bases 1 to 2380)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
            This record is derived from an annotated genomic sequence
            (NC_003076).
FEATURES             Location/Qualifiers
     source          1..2380
                     /organism="Arabidopsis thaliana"
                     /mol_type="mRNA"
                     /db_xref="taxon:3702"
                     /chromosome="5"
                     /ecotype="Columbia"
     gene            1..2380
                     /locus_tag="AT5G08500"
                     /gene_synonym="F8L15.19"
                     /db_xref="Araport:AT5G08500"
                     /db_xref="GeneID:830749"
                     /db_xref="TAIR:AT5G08500"
     CDS             532..2082
                     /locus_tag="AT5G08500"
                     /gene_synonym="F8L15.19"
                     /codon_start=1
                     /product="Transmembrane CLPTM1 family protein"
                     /protein_id="NP_001332181.1"
                     /db_xref="GeneID:830749"
                     /db_xref="Araport:AT5G08500"
                     /db_xref="TAIR:AT5G08500"
                     /translation="MWFYLSEHEKFNDFGNEGALIWHETNIPYAVWKPESTRTLSMTY
                     YPSEALKNNGSLYAHVFFALSGYPIDLSDPEYQPLNCFGRTHPVATYLPKRKADKKKS
                     LLGNPKDSDESHVEVEEVDGKDSDLKDEGPVEWVSYWKPNVTINLVDDFTRYPQHGVP
                     PNIYPYLLVEPSTINYYPTVFFNEFWLLRDKLILINETVSELPLNLEVSPISMTKWQL
                     FQQIDQSFQIHRSYGSMLDGESDELKRVFLEGNPYLLGVTMFVSMLHSVFDFLAFKND
                     IQFWNKNKSMEGLSAKSVVLNFICQFIIFLYLLDNDTSWMILASSGVGVCIEFWKIGK
                     AMRIEVDRSGMIPRLRFHDRESYASNKTKEYDDIAIKFLSYVLLLLVVGFSIYSLAYE
                     RHKSWYSWILSSLTSCVYMFGFIMMCPQLFINYKLKSVAHLPWRQMTYKFLNTIIDDL
                     FAFVIKMPMLHRLSVFRDDVIFLIYLYQRWVYPVDKTRVNEFGFGGEDESVDTKKISD
                     QEDDKKTN"
ORIGIN      
        1 agaagaaaaa aaacaaattc cataaatata tatatctttc gtcgactctg cttttacaca
       61 tctctcacac ggtaaagtta caataatctc agcttgaatc acactgacga aggcatcttc
      121 ctgcgattat ggcgtcgccg gcaggtgaaa cagcagcggt tgttgagggc ggagatgggc
      181 agcagcaacg acaagctggt gggtttgggc agacaattac cggaatcata agaatcgccg
      241 tcttctgtta ctttgcttct aagttctttt ctcccaaaca aaaacctgcg gatccttcca
      301 agcctactca tctcatgtcc aatctatttc agaggggcga gcccatagta atcttctggt
      361 taattgtgtt gattacttgc ttattcgtta atatatgcaa tttcattcgt ttctctcttc
      421 ttccaaaaca aaaaaaaaaa cgtttctttt tggttcgaaa cttcgaatca gagtttttca
      481 acttctgggt ggtttagggt ttttccgttt tgtgtttttg tttgtcagga tatgtggttt
      541 tatctttcgg agcatgagaa attcaatgac ttcggcaatg aaggtgcgct tatttggcat
      601 gagacaaaca taccttatgc tgtgtggaaa ccagagagca ctaggacctt gtcaatgacg
      661 tactatcctt ccgaggcact gaagaataat ggaagtctgt atgctcatgt cttctttgct
      721 ctatctggtt atcctataga tcttagtgat cctgaatacc agcctctcaa ctgctttggc
      781 aggactcacc ctgttgcaac ttacttacca aagcgaaaag cagataagaa gaagagtctg
      841 ttgggaaatc ccaaagactc tgatgaatcc catgtggaag ttgaggaggt tgatggtaag
      901 gactcggatc tcaaggatga gggccctgtg gaatgggtat cctactggaa accaaatgtc
      961 acaattaacc tagtcgatga ctttactcgc tatccacagc atggtgtacc accaaacatt
     1021 tatccttact tactggtgga acctagtaca ataaactact accctacagt tttcttcaat
     1081 gagttttggt tgctaaggga caagttgatt ttaatcaatg agacggtctc agagctgcca
     1141 cttaatctgg aagtaagccc cataagcatg acaaagtggc agctgtttca gcagattgat
     1201 cagtctttcc agattcaccg tagctatgga agcatgcttg atggtgaatc tgacgaacta
     1261 aagagggtgt ttttggaagg aaatccctat ctgttgggcg tcactatgtt tgtttcgatg
     1321 cttcattctg tattcgactt ccttgcattc aaaaatgata tccagttttg gaacaagaac
     1381 aaatctatgg aaggactgtc tgcgaagtct gtcgtactaa actttatctg tcagtttatc
     1441 atcttcctct acctgcttga caacgacact tcatggatga tactggctag ctctggagtt
     1501 ggtgtctgca tcgagttctg gaaaattggg aaagccatgc gcattgaggt tgatcgaagt
     1561 gggatgattc caagattgag gttccacgac cgtgaatcct atgcaagcaa caagaccaag
     1621 gagtatgacg acattgccat caaattctta tcctatgtgc tcctccttct tgttgtgggt
     1681 ttctccatat attcacttgc ctatgaacgc cacaagagct ggtactcatg gatcctatct
     1741 tcactaacga gctgcgtcta catgtttggt ttcataatga tgtgtcctca attgttcatc
     1801 aactataagc tgaagtcagt agcacattta ccatggaggc aaatgacata taagttcctc
     1861 aacacaatca tcgacgatct ctttgctttt gtcatcaaaa tgccaatgtt gcatcgcctt
     1921 tctgtcttcc gagatgatgt gatattctta atatacttgt accagagatg ggtttatcct
     1981 gtggacaaaa cacgtgtcaa cgagtttggt tttggaggtg aggatgagtc tgtggataca
     2041 aagaagatct ctgaccaaga agatgacaag aaaacaaact aattagcttt gtgcttttgt
     2101 ttttccctaa caattttgag tttttttggg tctgctttag taagttttgt taatgctact
     2161 tatatccaaa agtaatttcg ttttagggta atataaaaaa aaaagtgtta aagaatatca
     2221 cttagttata attttgtttt gtttatatgt aactttagtt ctcaatgttt ttctagacac
     2281 tcttcttcat ctggtaccag atatagagac agatgatttg ctagataaag attttgtaga
     2341 tcggcaaatg tcataattga gtaatttgtt gttttggata
//
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