LOCUS NM_001341225 1190 bp mRNA linear PLN 20-OCT-2022
DEFINITION Arabidopsis thaliana alpha/beta-Hydrolases superfamily protein
(AT4G17470), mRNA.
ACCESSION NM_001341225
VERSION NM_001341225.1
DBLINK BioProject: PRJNA116
BioSample: SAMN03081427
KEYWORDS RefSeq.
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 1190)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 1190)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (19-OCT-2022) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 1190)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
REFERENCE 4 (bases 1 to 1190)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
COMMENT REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
This record is derived from an annotated genomic sequence
(NC_003075).
FEATURES Location/Qualifiers
source 1..1190
/organism="Arabidopsis thaliana"
/mol_type="mRNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
gene 1..1190
/locus_tag="AT4G17470"
/gene_synonym="DL4770C; FCAALL.11"
/db_xref="Araport:AT4G17470"
/db_xref="GeneID:827458"
/db_xref="TAIR:AT4G17470"
CDS 78..1004
/locus_tag="AT4G17470"
/gene_synonym="DL4770C; FCAALL.11"
/note="alpha/beta-Hydrolases superfamily protein;
FUNCTIONS IN: palmitoyl-(protein) hydrolase activity;
INVOLVED IN: protein modification process; LOCATED IN:
endomembrane system; EXPRESSED IN: 11 plant structures;
EXPRESSED DURING: LP.06 six leaves visible, LP.04 four
leaves visible, C globular stage, petal differentiation
and expansion stage; CONTAINS InterPro DOMAIN/s: Palmitoyl
protein thioesterase (InterPro:IPR002472); BEST
Arabidopsis thaliana protein match is:
alpha/beta-Hydrolases superfamily protein
(TAIR:AT4G17480.1)."
/codon_start=1
/product="alpha/beta-Hydrolases superfamily protein"
/protein_id="NP_001319975.1"
/db_xref="GeneID:827458"
/db_xref="TAIR:AT4G17470"
/db_xref="Araport:AT4G17470"
/translation="MEKSFQRSALLVTLSLFFFSIPVSLSVPFVLFHGFGGECSNDKV
SNLTQFLINHSGYPGTCVEIGDGVKDSLFMPLRQQASIACEKIKQMPELSEGYNIVAE
SQGNLVARGLIEFCDNAPPVINYVSLGGPHAGVAAIPEGCDSAFCILMKAFFAVIYSD
FAQDHTAPSGYVKKPMEIKNYLEHSKYLPKLNNERPGEKNSTFKDRFTSLQNLVLIMF
QNDTILVPRETSWFGYYPDGASSSTPVLPPQKTKLYTEDWIGLKTLDDAGKVRFISVP
GGHIEITEEDLVKYVVPYLQNESLFSSEHETI"
ORIGIN
1 gtaaacttct tgcgcacgta attactctgt tttgtgttta agaaagaatt aacggttctc
61 tcccactgag tagctccatg gagaagagtt tccaaaggtc tgctctcctt gtgactttgt
121 ctctcttctt cttctccatt ccggtttcac tctctgttcc attcgttctg tttcacgggt
181 ttggaggtga atgctccaat gacaaagtga gcaacttaac acagttcctc atcaaccact
241 ccggctaccc tggaacttgc gtagaaatag gagatggagt gaaagattcc ttattcatgc
301 cgcttaggca acaagccagc atagcttgtg agaaaattaa acagatgcca gagctgagtg
361 aaggttacaa catagtggca gagtctcaag gaaacttggt cgctagaggc ctaatcgagt
421 tttgcgataa tgctccacca gtcatcaact atgtctcctt aggaggacct catgctggcg
481 tcgctgcaat ccccgagggg tgtgattcag cattttgcat actcatgaag gcgttttttg
541 cagtgattta cagcgatttt gctcaagatc atactgctcc aagtggttat gtcaaaaaac
601 ctatggaaat aaaaaattat ttggaacact ccaagtatct gccaaagcta aacaacgaga
661 gacctggcga gaaaaactcc acttttaaag accgtttcac cagcttgcaa aacttggttc
721 tcatcatgtt ccagaatgat acaatattgg ttccaagaga aacttcttgg ttcggatatt
781 acccggatgg agcttcatct tcaacacctg ttttgcctcc tcaaaagaca aagctataca
841 ctgaggattg gattggtctg aaaaccttgg atgatgctgg aaaagtgagg tttattagtg
901 tccctggcgg acacatcgaa ataacggaag aagaccttgt caaatacgtt gtgccttacc
961 tccagaatga gtctttgttc tcttctgaac acgagacaat atagacatta caatctttaa
1021 cccattaata aattggcctc gtccgaatct aagggcctat atcatcaatg taacatcatc
1081 atctataagc ttcatctcgt ataagcttaa gacttacctt tctcgtgcat acaaaaaatc
1141 aataaaaatc ataaggaaat tgtgatcatg cagagttctt catgtcttct
//