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Arabidopsis thaliana alpha/beta-Hydrolases superfamily protein (AT4G17470), mRNA

NCBI Reference Sequence: NM_001341225.1

FASTA Graphics 

LOCUS       NM_001341225            1190 bp    mRNA    linear   PLN 20-OCT-2022
DEFINITION  Arabidopsis thaliana alpha/beta-Hydrolases superfamily protein
            (AT4G17470), mRNA.
ACCESSION   NM_001341225
VERSION     NM_001341225.1
DBLINK      BioProject: PRJNA116
            BioSample: SAMN03081427
KEYWORDS    RefSeq.
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 1190)
  AUTHORS   Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
            Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
            Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
            Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
            Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
            Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
            Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
            Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
            Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
            Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
            Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
            Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
            Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
            Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
            Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
            Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
            Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
            Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
            Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
            Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
            Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
            Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
            Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
            Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
            Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
            Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
            Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
            Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
            Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
            Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
            Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
            Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
            Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
            Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
            Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
            Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
            Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
            Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
            Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
            Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
            Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
            Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
            Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
            Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
            Martienssen,R. and McCombie,W.R.
  TITLE     Sequence and analysis of chromosome 4 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 402 (6763), 769-777 (1999)
   PUBMED   10617198
REFERENCE   2  (bases 1 to 1190)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 1190)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   4  (bases 1 to 1190)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
            This record is derived from an annotated genomic sequence
            (NC_003075).
FEATURES             Location/Qualifiers
     source          1..1190
                     /organism="Arabidopsis thaliana"
                     /mol_type="mRNA"
                     /db_xref="taxon:3702"
                     /chromosome="4"
                     /ecotype="Columbia"
     gene            1..1190
                     /locus_tag="AT4G17470"
                     /gene_synonym="DL4770C; FCAALL.11"
                     /db_xref="Araport:AT4G17470"
                     /db_xref="GeneID:827458"
                     /db_xref="TAIR:AT4G17470"
     CDS             78..1004
                     /locus_tag="AT4G17470"
                     /gene_synonym="DL4770C; FCAALL.11"
                     /note="alpha/beta-Hydrolases superfamily protein;
                     FUNCTIONS IN: palmitoyl-(protein) hydrolase activity;
                     INVOLVED IN: protein modification process; LOCATED IN:
                     endomembrane system; EXPRESSED IN: 11 plant structures;
                     EXPRESSED DURING: LP.06 six leaves visible, LP.04 four
                     leaves visible, C globular stage, petal differentiation
                     and expansion stage; CONTAINS InterPro DOMAIN/s: Palmitoyl
                     protein thioesterase (InterPro:IPR002472); BEST
                     Arabidopsis thaliana protein match is:
                     alpha/beta-Hydrolases superfamily protein
                     (TAIR:AT4G17480.1)."
                     /codon_start=1
                     /product="alpha/beta-Hydrolases superfamily protein"
                     /protein_id="NP_001319975.1"
                     /db_xref="GeneID:827458"
                     /db_xref="TAIR:AT4G17470"
                     /db_xref="Araport:AT4G17470"
                     /translation="MEKSFQRSALLVTLSLFFFSIPVSLSVPFVLFHGFGGECSNDKV
                     SNLTQFLINHSGYPGTCVEIGDGVKDSLFMPLRQQASIACEKIKQMPELSEGYNIVAE
                     SQGNLVARGLIEFCDNAPPVINYVSLGGPHAGVAAIPEGCDSAFCILMKAFFAVIYSD
                     FAQDHTAPSGYVKKPMEIKNYLEHSKYLPKLNNERPGEKNSTFKDRFTSLQNLVLIMF
                     QNDTILVPRETSWFGYYPDGASSSTPVLPPQKTKLYTEDWIGLKTLDDAGKVRFISVP
                     GGHIEITEEDLVKYVVPYLQNESLFSSEHETI"
ORIGIN      
        1 gtaaacttct tgcgcacgta attactctgt tttgtgttta agaaagaatt aacggttctc
       61 tcccactgag tagctccatg gagaagagtt tccaaaggtc tgctctcctt gtgactttgt
      121 ctctcttctt cttctccatt ccggtttcac tctctgttcc attcgttctg tttcacgggt
      181 ttggaggtga atgctccaat gacaaagtga gcaacttaac acagttcctc atcaaccact
      241 ccggctaccc tggaacttgc gtagaaatag gagatggagt gaaagattcc ttattcatgc
      301 cgcttaggca acaagccagc atagcttgtg agaaaattaa acagatgcca gagctgagtg
      361 aaggttacaa catagtggca gagtctcaag gaaacttggt cgctagaggc ctaatcgagt
      421 tttgcgataa tgctccacca gtcatcaact atgtctcctt aggaggacct catgctggcg
      481 tcgctgcaat ccccgagggg tgtgattcag cattttgcat actcatgaag gcgttttttg
      541 cagtgattta cagcgatttt gctcaagatc atactgctcc aagtggttat gtcaaaaaac
      601 ctatggaaat aaaaaattat ttggaacact ccaagtatct gccaaagcta aacaacgaga
      661 gacctggcga gaaaaactcc acttttaaag accgtttcac cagcttgcaa aacttggttc
      721 tcatcatgtt ccagaatgat acaatattgg ttccaagaga aacttcttgg ttcggatatt
      781 acccggatgg agcttcatct tcaacacctg ttttgcctcc tcaaaagaca aagctataca
      841 ctgaggattg gattggtctg aaaaccttgg atgatgctgg aaaagtgagg tttattagtg
      901 tccctggcgg acacatcgaa ataacggaag aagaccttgt caaatacgtt gtgccttacc
      961 tccagaatga gtctttgttc tcttctgaac acgagacaat atagacatta caatctttaa
     1021 cccattaata aattggcctc gtccgaatct aagggcctat atcatcaatg taacatcatc
     1081 atctataagc ttcatctcgt ataagcttaa gacttacctt tctcgtgcat acaaaaaatc
     1141 aataaaaatc ataaggaaat tgtgatcatg cagagttctt catgtcttct
//
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