LOCUS NM_001338290 3241 bp mRNA linear PLN 20-OCT-2022
DEFINITION Arabidopsis thaliana hAT dimerization domain-containing protein
(AT3G17450), mRNA.
ACCESSION NM_001338290
VERSION NM_001338290.1
DBLINK BioProject: PRJNA116
BioSample: SAMN03081427
KEYWORDS RefSeq.
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 3241)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 3241)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (19-OCT-2022) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 3241)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
REFERENCE 4 (bases 1 to 3241)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
COMMENT REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
This record is derived from an annotated genomic sequence
(NC_003074).
FEATURES Location/Qualifiers
source 1..3241
/organism="Arabidopsis thaliana"
/mol_type="mRNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
gene 1..3241
/locus_tag="AT3G17450"
/db_xref="Araport:AT3G17450"
/db_xref="GeneID:821009"
/db_xref="TAIR:AT3G17450"
CDS 484..3117
/locus_tag="AT3G17450"
/codon_start=1
/product="hAT dimerization domain-containing protein"
/protein_id="NP_001326974.1"
/db_xref="GeneID:821009"
/db_xref="Araport:AT3G17450"
/db_xref="TAIR:AT3G17450"
/translation="MAPPGSIGVVDPGWEHGVAQDQRKKKVKCNYCGKIVSGGIYRLK
QHLARVSGEVTYCDKSPEEVCMRMKENLVRSTKKLRQSEDNSGQSCSSFHQSNNDDEA
DEEERRCWSIRSKGKLGLSDGSLLRSSGYIDPGWEHGIAQDERKKKVKCNYCNKIVSG
GINRFKQHLARIPGEVAPCKTAPEEVYVKIKENMKWHRAGKRQNRPDDEMGALTFRTV
SQDPDQEEDREDHDFYPTSQDRLMLGNGRFSKDKRKSFDSTNMRSVSEAKTKRARMIP
FQSPSSSKQRKLYSSCSNRVVSRKDVTSSISKFLHHVGVPTEAANSLYFQKMIELIGM
YGEGFVVPSSQLFSGRLLQEEMSTIKSYLREYRSSWVVTGCSIMADTWTNTEGKKMIS
FLVSCPRGVYFHSSIDATDIVEDALSLFKCLDKLVDDIGEENVVQVITQNTAIFRSAG
KLLEEKRKNLYWTPCAIHCTELVLEDFSKLEFVSECLEKAQRITRFIYNQTWLLNLMK
NEFTQGLDLLRPAVMRHASGFTTLQSLMDHKASLRGLFQSDGWILSQTAAKSEEGREV
EKMVLSAVFWKKVQYVLKSVDPVMQVIHMINDGGDRLSMPYAYGYMCCAKMAIKSIHS
DDARKYGPFWRVIEYRWNPLFHHPLYVAAYFFNPAYKYRPDFMAQSEVVRGVNECIVR
LEPDNTRRITALMQIPDYTCAKADFGTDIAIGTRTELDPSAWWQQHGISCLELQRVAV
RILSHTCSSVGCEPKWSVYDQVNSQCQSQFGKKSTKDLTYVHYNLRLREKQLKQRLHY
EDEPPPTLNHALLDRLLPDWLVTSEKEEEEALHGEDRAEKEDHEDDEEEEEKFYMESG
NVDGEGEDNLDPYDDDLSDDD"
ORIGIN
1 tcattttgga aattcgttaa aaacaacgag tcagccgaag acagaaaccc tagaaatcgc
61 ccgagtcgag ttaattcgcc tctcacccag ctctatctcg tcccgtgact cgttccttcc
121 tccgcaaaaa cgcttcttcg attcttagct caaatacgta tctcgccgtc taaatatgtg
181 ttccaacttc gcttaagctt cacctccatt ttcttggtct gaaaaatcaa caaaaccaga
241 aaaaaatctc gcctccgatt acgaaagttc tcagcttcgt aggtatgcta tagaagaaaa
301 acccagttca attatttgtt cttgctttat aaaattgatg aaaaaatgtt gtttttaaat
361 ccatctatgt tgaatccatg catgttgttt caaagtcttg tttttgttgt aaagactctt
421 gtagattgtg gctgcactgg tttgtggaac tgttaaagtt tgaagcttgt aaatggtttg
481 acaatggctc cacctggatc aattggagtg gttgaccctg gatgggagca tggtgttgca
541 caagaccaac ggaagaagaa ggttaaatgc aattactgtg gaaagattgt tagtggaggg
601 atatacagat tgaagcaaca cttggctcga gtttcaggag aagttactta ttgtgacaag
661 tctccggagg aagtatgtat gaggatgaag gagaatctgg tgcgttccac caaaaagctg
721 aggcagtctg aggataatag tggacagtct tgttccagtt tccatcaatc taacaatgac
781 gatgaagcgg atgaggaaga gcggcgctgc tggtctataa gaagtaaggg aaagctaggc
841 ttgagtgatg ggagtcttct tcggtcttca ggttatattg atcctggatg ggaacatggt
901 attgctcagg acgagaggaa aaagaaagtg aaatgtaatt actgtaacaa gattgtgagt
961 ggcggtatta accgttttaa acagcacctg gcgagaatac ctggagaggt agcgccgtgt
1021 aaaactgctc ccgaggaggt ttatgttaag attaaagaga atatgaaatg gcatcgagct
1081 gggaagaggc agaacagacc tgatgatgaa atgggagctt taactttcag aacggtctct
1141 caggatcctg accaagaaga agacagagaa gatcatgact tctatccaac cagccaagat
1201 aggttgatgc tgggaaatgg aaggtttagt aaagacaaaa gaaaaagctt tgattcaacg
1261 aacatgagat ctgtctctga agcaaaaaca aagagagcga ggatgatacc gtttcagtca
1321 ccttcttcga gcaagcaaag gaaactatac agtagctgtt caaacagagt tgtatcacga
1381 aaagacgtca catcctccat ttccaaattc ttacaccatg taggagttcc cacagaagca
1441 gcaaattctc tgtactttca aaagatgatt gaattgattg gtatgtacgg agagggtttc
1501 gttgtgccct cgagtcagct gttttctggt aggctcttac aggaagagat gtcaactatc
1561 aaaagctact tgagggagta cagatcttct tgggtggtta caggttgttc cataatggca
1621 gatacttgga ccaacacaga gggcaagaaa atgatcagtt tcttggtctc gtgccctcgt
1681 ggtgtctact tccactcctc gattgatgcc actgatatag tagaagatgc tttaagcctt
1741 ttcaagtgtc tagacaaact agttgacgac attggcgagg aaaatgtggt gcaggttatt
1801 acacagaaca ctgctatctt tagaagtgct ggaaaattac ttgaagagaa gagaaagaat
1861 ttgtattgga ctccttgtgc aatacattgc acagaactgg ttcttgaaga cttctcaaag
1921 ctagaatttg tctccgagtg cttagagaaa gcccaaagaa tcacaagatt catttacaat
1981 caaacatggc tgcttaatct tatgaagaac gaattcacac agggactaga tcttcttaga
2041 ccagcagtca tgcgccacgc ttccgggttc accactcttc aaagtcttat ggaccacaag
2101 gccagtctca gaggtctgtt tcaatctgac ggctggattt tgtcacagac cgccgccaag
2161 tctgaagagg gaagagaagt ggagaagatg gtgttgagtg ctgtgttttg gaagaaggtt
2221 cagtatgttt tgaaatcggt tgatccggtg atgcaggtga ttcacatgat caatgatggt
2281 ggcgatagac tatctatgcc atatgcttac ggttacatgt gctgtgcgaa aatggcgatc
2341 aagtctattc atagcgatga tgcaaggaaa tacggaccgt tttggcgggt gatagaatac
2401 cgttggaacc cattgtttca tcatcctctc tatgtggctg catatttctt caacccggca
2461 tacaaatatc gtcctgattt tatggcgcag tctgaggttg tgcgtggagt taacgaatgc
2521 attgttaggc ttgagcctga taacacgcgt agaatcacag cattgatgca gattccggat
2581 tatacttgtg cgaaagctga ttttggaacg gatatagcca ttggcacaag aacagagctt
2641 gatccatcgg cgtggtggca acagcatggg ataagctgtt tggaactcca gcgagtggcg
2701 gttcggatac tgagccacac ttgctcgtct gttgggtgtg agcctaagtg gagcgtgtac
2761 gaccaagtta acagtcaatg ccagagccaa tttgggaaaa aatcaacgaa agatctaaca
2821 tacgttcatt acaacttacg gctcagagaa aaacagctga agcaacggct acattatgag
2881 gatgaaccac caccaactct taaccacgct ttgctggatc ggttgctccc tgactggctc
2941 gtaacatccg agaaggagga ggaggaggct ttgcacgggg aagacagagc agagaaggaa
3001 gaccatgaag acgatgagga agaggaggag aagttttaca tggaatctgg taacgttgac
3061 ggtgaaggtg aagacaacct tgatccttac gatgatgatc ttagtgacga tgattagtta
3121 gtgctacaat tctaacgaag taacactgta ttttgaattc tagcattgta tccttaaaat
3181 attcgaaaaa tatgaaaatt ttgttggcta gaagaatata atcaaagtat tattaggtga
3241 a
//