LOCUS NM_001337715 1498 bp mRNA linear PLN 20-OCT-2022
DEFINITION Arabidopsis thaliana transmembrane protein, putative (Protein of
unknown function, DUF538) (AT3G07470), mRNA.
ACCESSION NM_001337715
VERSION NM_001337715.1
DBLINK BioProject: PRJNA116
BioSample: SAMN03081427
KEYWORDS RefSeq.
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 1498)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (bases 1 to 1498)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (19-OCT-2022) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 1498)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
REFERENCE 4 (bases 1 to 1498)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
COMMENT REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
This record is derived from an annotated genomic sequence
(NC_003074).
FEATURES Location/Qualifiers
source 1..1498
/organism="Arabidopsis thaliana"
/mol_type="mRNA"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
gene 1..1498
/locus_tag="AT3G07470"
/db_xref="Araport:AT3G07470"
/db_xref="GeneID:819935"
/db_xref="TAIR:AT3G07470"
CDS 354..827
/locus_tag="AT3G07470"
/codon_start=1
/product="transmembrane protein, putative (Protein of
unknown function, DUF538)"
/protein_id="NP_001326338.1"
/db_xref="GeneID:819935"
/db_xref="Araport:AT3G07470"
/db_xref="TAIR:AT3G07470"
/translation="MMLRIVQIAFLCLVLVAGISISTAISETETIYEILLANGLPSGI
FPKGVREFTFDVETGRFSVYLNQACEAKYETEIHYDANITGTIGSAQISDLSGISAQE
LFLWFPVKGIRVDVPSSGLIYFDVGVVRKQYSLSLFETPRDCVPVRGIHKELLDM"
ORIGIN
1 ctactttttc caataacgcg taagaaattt aggaagttag aaccaaaggc ttaacgaaac
61 aagccacatt taactaaata ctgcttggtg gacacacatc cgacgtggct atcgttcatt
121 ggtctgttcc atctatggaa tgagaagcac aagattactg ctccattcca aattccgcct
181 tcaataattt gataaaattt tgatccactc tgtttcaagc tgtcaccaga atgtcgtctt
241 cttcttcttc tccttcttcg tcttccctta aacccattaa ttcaatttcc tgataaacga
301 gcagagagag atctgtcaaa atcacaaacc gtgaattcgg gaagaataag ccgatgatgc
361 ttcgtattgt tcaaatcgcg tttctatgtc tcgttctcgt cgccgggatc tcgatctcca
421 cggcgatatc agagactgag actatatacg agatcctcct ggcaaacgga ttaccttcgg
481 ggatattccc gaaaggtgtc agagaattca ccttcgacgt cgaaacggga cgattctcgg
541 tttatttgaa tcaggcatgc gaggctaaat acgagactga gatacattac gacgccaata
601 ttacggggac tataggttct gctcaaatct ctgatttgtc tggaatctcg gcgcaagagc
661 tattcttgtg gtttccggtt aaaggaatcc gagtcgacgt gccgagttct ggtcttatat
721 acttcgacgt tggtgttgtt cgaaagcaat attctttgtc tttgttcgag actccgagag
781 attgcgttcc ggttcgtggg attcacaagg aactgttaga catgtgacat gaagaattat
841 ctttagagct aggaaagatt gttccttttt agggttatgt tctccattct tgaattggtt
901 gagatttttt tatcggtgaa gaactgttag acttgtgaaa ttgggaatat ctttcgaact
961 aggaaagatg gttttgaaag ttttgcattg atcagattca atcatgtaat ggaaaataag
1021 ctaatgtgtg ctcaatgggt cttcttgcag gttgagttgc cattgtaccg agtagatcaa
1081 aatcttggga gaaacatcat ttagcaagag ttttaaagaa ttgttgtata ccataccaga
1141 aagaaaggaa gatagatgtt ctcatcaatc aattcttgaa gatacttcaa ctgttttggt
1201 ctcaaatctt aggcatgatt caaaatcaaa ttgcttcatt ctttccctcc ccattccagt
1261 tttgcttctg taattcgttc tcagattagg ccggggactg aaccgaggag agaatctgtg
1321 gttttgaaaa gatgctaaag ggatggccca gattttgttg aagtgatgat aactgtgagg
1381 tgatgaatgt tttgtgttgt attcttgtgt catgtctaaa acagatataa taaatcctat
1441 atttagccaa ataagtgtta tagaaaattg gcaatttgca atcatttctc tttcaccg
//