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Arabidopsis thaliana P-glycoprotein 10 (PGP10), partial mRNA

NCBI Reference Sequence: NM_001331921.1

FASTA Graphics 

LOCUS       NM_001331921            3865 bp    mRNA    linear   PLN 20-OCT-2022
DEFINITION  Arabidopsis thaliana P-glycoprotein 10 (PGP10), partial mRNA.
ACCESSION   NM_001331921
VERSION     NM_001331921.1
DBLINK      BioProject: PRJNA116
            BioSample: SAMN03081427
KEYWORDS    RefSeq.
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 3865)
  AUTHORS   Theologis,A., Ecker,J.R., Palm,C.J., Federspiel,N.A., Kaul,S.,
            White,O., Alonso,J., Altafi,H., Araujo,R., Bowman,C.L.,
            Brooks,S.Y., Buehler,E., Chan,A., Chao,Q., Chen,H., Cheuk,R.F.,
            Chin,C.W., Chung,M.K., Conn,L., Conway,A.B., Conway,A.R.,
            Creasy,T.H., Dewar,K., Dunn,P., Etgu,P., Feldblyum,T.V., Feng,J.,
            Fong,B., Fujii,C.Y., Gill,J.E., Goldsmith,A.D., Haas,B.,
            Hansen,N.F., Hughes,B., Huizar,L., Hunter,J.L., Jenkins,J.,
            Johnson-Hopson,C., Khan,S., Khaykin,E., Kim,C.J., Koo,H.L.,
            Kremenetskaia,I., Kurtz,D.B., Kwan,A., Lam,B., Langin-Hooper,S.,
            Lee,A., Lee,J.M., Lenz,C.A., Li,J.H., Li,Y., Lin,X., Liu,S.X.,
            Liu,Z.A., Luros,J.S., Maiti,R., Marziali,A., Militscher,J.,
            Miranda,M., Nguyen,M., Nierman,W.C., Osborne,B.I., Pai,G.,
            Peterson,J., Pham,P.K., Rizzo,M., Rooney,T., Rowley,D., Sakano,H.,
            Salzberg,S.L., Schwartz,J.R., Shinn,P., Southwick,A.M., Sun,H.,
            Tallon,L.J., Tambunga,G., Toriumi,M.J., Town,C.D., Utterback,T.,
            Van Aken,S., Vaysberg,M., Vysotskaia,V.S., Walker,M., Wu,D., Yu,G.,
            Fraser,C.M., Venter,J.C. and Davis,R.W.
  TITLE     Sequence and analysis of chromosome 1 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 408 (6814), 816-820 (2000)
   PUBMED   11130712
REFERENCE   2  (bases 1 to 3865)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 3865)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-JUL-2017) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   4  (bases 1 to 3865)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   5  (bases 1 to 3865)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
            This record is derived from an annotated genomic sequence
            (NC_003070).
            COMPLETENESS: incomplete on the 5' end.
FEATURES             Location/Qualifiers
     source          1..3865
                     /organism="Arabidopsis thaliana"
                     /mol_type="mRNA"
                     /db_xref="taxon:3702"
                     /chromosome="1"
                     /ecotype="Columbia"
     gene            <1..3865
                     /gene="PGP10"
                     /locus_tag="AT1G10680"
                     /gene_synonym="ABCB10; ATP-binding cassette B10;
                     F20B24.12; F20B24_12; P-glycoprotein 10"
                     /db_xref="Araport:AT1G10680"
                     /db_xref="GeneID:837611"
                     /db_xref="TAIR:AT1G10680"
     CDS             1..3543
                     /gene="PGP10"
                     /locus_tag="AT1G10680"
                     /gene_synonym="ABCB10; ATP-binding cassette B10;
                     F20B24.12; F20B24_12; P-glycoprotein 10"
                     /codon_start=1
                     /product="P-glycoprotein 10"
                     /protein_id="NP_001320481.1"
                     /db_xref="Araport:AT1G10680"
                     /db_xref="GeneID:837611"
                     /db_xref="TAIR:AT1G10680"
                     /translation="MQPSNDPAIVDMAAAEKEKKRPSVSFLKLFSFADFYDCVLMALG
                     SIGACIHGASVPVFFIFFGKLINIIGLAYLFPQEASHKVAKYSLDFVYLSVVILFSSW
                     LEVACWMHTGERQAAKIRKAYLRSMLSQDISLFDTEISTGEVISAITSEILVVQDAIS
                     EKVGNFMHFISRFIAGFAIGFASVWQISLVTLSIVPFIALAGGIYAFVSSGLIVRVRK
                     SYVKANEIAEEVIGNVRTVQAFTGEEKAVSSYQGALRNTYNYGRKAGLAKGLGLGSLH
                     FVLFLSWALLIWFTSIVVHKGIANGGESFTTMLNVVIAGLSLGQAAPDISTFMRASAA
                     AYPIFQMIERNTEDKTGRKLGNVNGDILFKDVTFTYPSRPDVVIFDKLNFVIPAGKVV
                     ALVGGSGSGKSTMISLIERFYEPTDGAVMLDGNDIRYLDLKWLRGHIGLVNQEPVLFA
                     TTIRENIMYGKDDATSEEITNAAKLSEAISFINNLPEGFETQVGERGIQLSGGQKQRI
                     SISRAIVKNPSILLLDEATSALDAESEKIVQEALDRVMVGRTTVVVAHRLSTVRNADI
                     IAVVGGGKIIESGSHDELISNPDGAYSSLLRIQEAASPNLNHTPSLPVSTKPLPELPI
                     TETTSSIHQSVNQPDTTKQAKVTVGRLYSMIRPDWKYGLCGTLGSFIAGSQMPLFALG
                     IAQALVSYYMDWETTQNEVKRISILFCCGSVITVIVHTIEHTTFGIMGERLTLRVRQK
                     MFSAILRNEIGWFDKVDNTSSMLASRLESDATLLRTIVVDRSTILLENLGLVVTAFII
                     SFILNWRLTLVVLATYPLIISGHISEKIFMQGYGGNLSKAYLKANMLAGESISNIRTV
                     VAFCAEEKVLDLYSKELLEPSERSFRRGQMAGILYGVSQFFIFSSYGLALWYGSILME
                     KGLSSFESVMKTFMVLIVTALVMGEVLALAPDLLKGNQMVVSVFELLDRRTQVVGDTG
                     EELSNVEGTIELKGVHFSYPSRPDVTIFSDFNLLVPSGKSMALVGQSGSGKSSVLSLV
                     LRFYDPTAGIIMIDGQDIKKLKLKSLRRHIGLVQQEPALFATTIYENILYGKEGASES
                     EVMEAAKLANAHSFISSLPEGYSTKVGERGIQMSGGQRQRIAIARAVLKNPEILLLDE
                     ATSALDVESERVVQQAKIYKFILMNCRYNKHWIG"
ORIGIN      
        1 atgcaaccgt caaatgatcc agcaatcgtg gacatggcag cggcggagaa ggagaagaag
       61 cggccaagtg tatcatttct taagctcttc tcatttgctg atttttacga ttgcgttctg
      121 atggctcttg gatccattgg tgcttgcatt cacggagcct ccgttccagt tttcttcatc
      181 ttctttggca aactcatcaa catcatcggt cttgcttacc tcttcccaca agaagcttct
      241 cacaaagtcg ccaagtactc gttggatttt gtatatctga gtgtggtgat actcttttca
      301 tcatggttag aggttgcatg ttggatgcat acgggagaga gacaagcagc gaagattaga
      361 aaagcttatt tgcggtcaat gttaagccaa gacataagct tattcgacac cgagatttcc
      421 accggagaag tcatctccgc catcacctcc gagatccttg ttgtccaaga cgctatctcc
      481 gagaaggtag ggaatttcat gcacttcata agccggttca tagccggttt tgcgatcggg
      541 ttcgcgagcg tatggcaaat aagtctcgtc actctctcca tagtcccatt cattgctctc
      601 gccggcggaa tttacgcttt tgtcagcagc ggacttatcg tccgtgtccg gaaatcatac
      661 gtcaaggcca acgagatcgc agaagaggtg atcgggaatg tgaggaccgt acaagcgttt
      721 acgggagaag aaaaggcggt gagttcgtac caaggagctt tgaggaacac ttacaattac
      781 gggagaaaag ccggtttagc caaaggacta gggcttggtt cgttgcattt tgtcctgttt
      841 ttgtcttggg ctttgctcat ttggttcaca agcatcgttg ttcacaaggg aatcgctaat
      901 ggtggcgaat ctttcacgac catgctcaat gttgtcatcg ctggcttgtc tcttggtcag
      961 gcggctcctg acatttccac attcatgcga gccagtgctg ctgcgtatcc gatttttcag
     1021 atgattgaac ggaacacgga ggataaaaca ggtcgtaaac tcgggaatgt aaacggagac
     1081 attctattca aagacgtgac tttcacatac ccctctcgcc ctgatgtggt gatctttgac
     1141 aagctaaact tcgtgatccc tgcggggaaa gtcgtggctc ttgttggagg aagcgggtct
     1201 gggaaaagca ccatgatatc cttaattgaa cgattctacg agcctaccga tggagcggtg
     1261 atgctggatg ggaacgatat cagatacttg gatcttaagt ggttaagagg tcatattggt
     1321 ttggttaatc aagagcctgt cctgtttgca accacgattc gcgagaacat tatgtatggt
     1381 aaagacgatg ccacctctga ggaaattacc aatgctgcaa agctctcgga agccatctca
     1441 ttcatcaaca acctaccgga aggattcgaa actcaggtag gtgagagagg aattcagcta
     1501 tctggcgggc agaagcagag gatcagtatt tctagggcga tagtgaagaa tccatcgatc
     1561 ctcttactcg atgaggcaac aagcgcacta gatgcagagt cagagaaaat cgtgcaggaa
     1621 gctttggaca gggtgatggt tgggagaaca acggtcgtgg tggctcatag actctccact
     1681 gtaagaaacg ctgacatcat agccgttgtt ggaggaggga agatcattga gtccggaagc
     1741 cacgacgaac tcatatctaa ccctgatgga gcttattctt ctcttcttcg tatccaagaa
     1801 gctgccagcc ctaacttgaa ccacactcca agcttaccag tcagtacaaa acccttgccg
     1861 gaactaccaa tcacggagac gacctcgtcc attcatcaat cagtaaacca accagatacg
     1921 accaaacagg ccaaagtaac ggtgggacgt ctttactcta tgatccgtcc ggattggaaa
     1981 tacggattat gtgggacgtt aggttccttt attgcgggat ctcaaatgcc gcttttcgcg
     2041 cttggtatcg cacaggcttt agtatcttat tacatggact gggagacaac tcaaaacgag
     2101 gtcaaaagaa tctctatcct cttctgttgt ggctccgtca tcactgtcat cgtacatacc
     2161 attgagcata ccacctttgg tattatgggt gagcgtctca ctctccgagt ccgacaaaag
     2221 atgttttcag cgatcttgag gaatgaaatc gggtggtttg ataaggttga taacactagt
     2281 tcgatgttgg catcgcggct tgaaagtgat gcgactttgc ttagaaccat cgtggtcgat
     2341 agatcgacaa ttctacttga gaatttaggt cttgttgtga ctgctttcat catttctttt
     2401 atactcaact ggcgtctcac tcttgttgtc ttggccacat accccttgat tataagcggt
     2461 catatcagcg agaaaatttt catgcaaggc tatggaggaa acttgagtaa agcgtattta
     2521 aaggctaaca tgttggctgg agagtctatt agcaacatcc gaaccgtggt cgccttttgt
     2581 gcagaggaga aggttttaga cctttattcc aaagagcttc tagaaccttc agaacgttct
     2641 ttcaggcgtg gacagatggc cgggattttg tacggtgttt ctcaattctt catcttctcc
     2701 tcctacggcc ttgccctctg gtacggatcg attttgatgg agaaaggatt atcaagtttc
     2761 gaatctgtga tgaaaacatt catggttttg atagtaacgg cgttagtgat gggtgaagtg
     2821 ttggctctag ccccagatct tcttaaagga aaccagatgg ttgtttcggt tttcgagcta
     2881 ttggatcgaa gaacacaggt tgttggtgat actggtgagg agctgagtaa tgtggaaggc
     2941 actatagagc tcaaaggtgt tcatttcagt tatccttcac ggcctgatgt gactattttc
     3001 agcgatttca atctactagt tccttctggc aaaagcatgg cgcttgtggg acaaagcgga
     3061 tctggaaaaa gttcggttct ttcgcttgtt ctccggttct acgatcctac agccggaata
     3121 atcatgatag acgggcaaga catcaagaaa ctgaagttga aatcactgcg aagacacatt
     3181 ggtctggttc aacaagaacc ggctctgttt gcaacgacta tctatgagaa catcttgtat
     3241 ggtaaagaag gagcttctga atctgaagtc atggaagcag ctaagcttgc aaatgctcac
     3301 agtttcatca gctctctccc tgaaggttac tcaaccaaag tcggtgaacg tggcattcag
     3361 atgtcaggcg gccagagaca gagaattgct atagctagag ccgtcctcaa gaacccagag
     3421 attctgcttc ttgatgaagc cacaagcgcc ttagatgttg aatcagagcg tgtggtacaa
     3481 caggcaaaga tttacaagtt tatactaatg aattgcaggt acaacaagca ttggatcggc
     3541 taatgagaga ccgaaccacg gtggtggtgg ctcaccggct atcgacgatc aagaactcag
     3601 atatgataag tgtaatacaa gacggtaaga tcatagagca aggcagccac aatatcctcg
     3661 ttgagaacaa gaatggtccc tactctaaac ttatcagtct tcagcagcgg cagcgccatc
     3721 atccttaaga gttattattg aattatcaaa actcttggtt tttttttttt cttttctaaa
     3781 tatcgatcct acatttatat tatatgatta tgtaactcat atttgattat gctattcatt
     3841 cttgattcat tgttcaagga accgg
//
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Reference sequence information

More about the PGP10 gene

  • PGP10 gene
    Also Known As: AT1G10680, ABCB10, ATP-...

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