LOCUS NM_001331921 3865 bp mRNA linear PLN 20-OCT-2022
DEFINITION Arabidopsis thaliana P-glycoprotein 10 (PGP10), partial mRNA.
ACCESSION NM_001331921
VERSION NM_001331921.1
DBLINK BioProject: PRJNA116
BioSample: SAMN03081427
KEYWORDS RefSeq.
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 3865)
AUTHORS Theologis,A., Ecker,J.R., Palm,C.J., Federspiel,N.A., Kaul,S.,
White,O., Alonso,J., Altafi,H., Araujo,R., Bowman,C.L.,
Brooks,S.Y., Buehler,E., Chan,A., Chao,Q., Chen,H., Cheuk,R.F.,
Chin,C.W., Chung,M.K., Conn,L., Conway,A.B., Conway,A.R.,
Creasy,T.H., Dewar,K., Dunn,P., Etgu,P., Feldblyum,T.V., Feng,J.,
Fong,B., Fujii,C.Y., Gill,J.E., Goldsmith,A.D., Haas,B.,
Hansen,N.F., Hughes,B., Huizar,L., Hunter,J.L., Jenkins,J.,
Johnson-Hopson,C., Khan,S., Khaykin,E., Kim,C.J., Koo,H.L.,
Kremenetskaia,I., Kurtz,D.B., Kwan,A., Lam,B., Langin-Hooper,S.,
Lee,A., Lee,J.M., Lenz,C.A., Li,J.H., Li,Y., Lin,X., Liu,S.X.,
Liu,Z.A., Luros,J.S., Maiti,R., Marziali,A., Militscher,J.,
Miranda,M., Nguyen,M., Nierman,W.C., Osborne,B.I., Pai,G.,
Peterson,J., Pham,P.K., Rizzo,M., Rooney,T., Rowley,D., Sakano,H.,
Salzberg,S.L., Schwartz,J.R., Shinn,P., Southwick,A.M., Sun,H.,
Tallon,L.J., Tambunga,G., Toriumi,M.J., Town,C.D., Utterback,T.,
Van Aken,S., Vaysberg,M., Vysotskaia,V.S., Walker,M., Wu,D., Yu,G.,
Fraser,C.M., Venter,J.C. and Davis,R.W.
TITLE Sequence and analysis of chromosome 1 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 816-820 (2000)
PUBMED 11130712
REFERENCE 2 (bases 1 to 3865)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (19-OCT-2022) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 3865)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (18-JUL-2017) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
REFERENCE 4 (bases 1 to 3865)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
REFERENCE 5 (bases 1 to 3865)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
COMMENT REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
This record is derived from an annotated genomic sequence
(NC_003070).
COMPLETENESS: incomplete on the 5' end.
FEATURES Location/Qualifiers
source 1..3865
/organism="Arabidopsis thaliana"
/mol_type="mRNA"
/db_xref="taxon:3702"
/chromosome="1"
/ecotype="Columbia"
gene <1..3865
/gene="PGP10"
/locus_tag="AT1G10680"
/gene_synonym="ABCB10; ATP-binding cassette B10;
F20B24.12; F20B24_12; P-glycoprotein 10"
/db_xref="Araport:AT1G10680"
/db_xref="GeneID:837611"
/db_xref="TAIR:AT1G10680"
CDS 1..3543
/gene="PGP10"
/locus_tag="AT1G10680"
/gene_synonym="ABCB10; ATP-binding cassette B10;
F20B24.12; F20B24_12; P-glycoprotein 10"
/codon_start=1
/product="P-glycoprotein 10"
/protein_id="NP_001320481.1"
/db_xref="Araport:AT1G10680"
/db_xref="GeneID:837611"
/db_xref="TAIR:AT1G10680"
/translation="MQPSNDPAIVDMAAAEKEKKRPSVSFLKLFSFADFYDCVLMALG
SIGACIHGASVPVFFIFFGKLINIIGLAYLFPQEASHKVAKYSLDFVYLSVVILFSSW
LEVACWMHTGERQAAKIRKAYLRSMLSQDISLFDTEISTGEVISAITSEILVVQDAIS
EKVGNFMHFISRFIAGFAIGFASVWQISLVTLSIVPFIALAGGIYAFVSSGLIVRVRK
SYVKANEIAEEVIGNVRTVQAFTGEEKAVSSYQGALRNTYNYGRKAGLAKGLGLGSLH
FVLFLSWALLIWFTSIVVHKGIANGGESFTTMLNVVIAGLSLGQAAPDISTFMRASAA
AYPIFQMIERNTEDKTGRKLGNVNGDILFKDVTFTYPSRPDVVIFDKLNFVIPAGKVV
ALVGGSGSGKSTMISLIERFYEPTDGAVMLDGNDIRYLDLKWLRGHIGLVNQEPVLFA
TTIRENIMYGKDDATSEEITNAAKLSEAISFINNLPEGFETQVGERGIQLSGGQKQRI
SISRAIVKNPSILLLDEATSALDAESEKIVQEALDRVMVGRTTVVVAHRLSTVRNADI
IAVVGGGKIIESGSHDELISNPDGAYSSLLRIQEAASPNLNHTPSLPVSTKPLPELPI
TETTSSIHQSVNQPDTTKQAKVTVGRLYSMIRPDWKYGLCGTLGSFIAGSQMPLFALG
IAQALVSYYMDWETTQNEVKRISILFCCGSVITVIVHTIEHTTFGIMGERLTLRVRQK
MFSAILRNEIGWFDKVDNTSSMLASRLESDATLLRTIVVDRSTILLENLGLVVTAFII
SFILNWRLTLVVLATYPLIISGHISEKIFMQGYGGNLSKAYLKANMLAGESISNIRTV
VAFCAEEKVLDLYSKELLEPSERSFRRGQMAGILYGVSQFFIFSSYGLALWYGSILME
KGLSSFESVMKTFMVLIVTALVMGEVLALAPDLLKGNQMVVSVFELLDRRTQVVGDTG
EELSNVEGTIELKGVHFSYPSRPDVTIFSDFNLLVPSGKSMALVGQSGSGKSSVLSLV
LRFYDPTAGIIMIDGQDIKKLKLKSLRRHIGLVQQEPALFATTIYENILYGKEGASES
EVMEAAKLANAHSFISSLPEGYSTKVGERGIQMSGGQRQRIAIARAVLKNPEILLLDE
ATSALDVESERVVQQAKIYKFILMNCRYNKHWIG"
ORIGIN
1 atgcaaccgt caaatgatcc agcaatcgtg gacatggcag cggcggagaa ggagaagaag
61 cggccaagtg tatcatttct taagctcttc tcatttgctg atttttacga ttgcgttctg
121 atggctcttg gatccattgg tgcttgcatt cacggagcct ccgttccagt tttcttcatc
181 ttctttggca aactcatcaa catcatcggt cttgcttacc tcttcccaca agaagcttct
241 cacaaagtcg ccaagtactc gttggatttt gtatatctga gtgtggtgat actcttttca
301 tcatggttag aggttgcatg ttggatgcat acgggagaga gacaagcagc gaagattaga
361 aaagcttatt tgcggtcaat gttaagccaa gacataagct tattcgacac cgagatttcc
421 accggagaag tcatctccgc catcacctcc gagatccttg ttgtccaaga cgctatctcc
481 gagaaggtag ggaatttcat gcacttcata agccggttca tagccggttt tgcgatcggg
541 ttcgcgagcg tatggcaaat aagtctcgtc actctctcca tagtcccatt cattgctctc
601 gccggcggaa tttacgcttt tgtcagcagc ggacttatcg tccgtgtccg gaaatcatac
661 gtcaaggcca acgagatcgc agaagaggtg atcgggaatg tgaggaccgt acaagcgttt
721 acgggagaag aaaaggcggt gagttcgtac caaggagctt tgaggaacac ttacaattac
781 gggagaaaag ccggtttagc caaaggacta gggcttggtt cgttgcattt tgtcctgttt
841 ttgtcttggg ctttgctcat ttggttcaca agcatcgttg ttcacaaggg aatcgctaat
901 ggtggcgaat ctttcacgac catgctcaat gttgtcatcg ctggcttgtc tcttggtcag
961 gcggctcctg acatttccac attcatgcga gccagtgctg ctgcgtatcc gatttttcag
1021 atgattgaac ggaacacgga ggataaaaca ggtcgtaaac tcgggaatgt aaacggagac
1081 attctattca aagacgtgac tttcacatac ccctctcgcc ctgatgtggt gatctttgac
1141 aagctaaact tcgtgatccc tgcggggaaa gtcgtggctc ttgttggagg aagcgggtct
1201 gggaaaagca ccatgatatc cttaattgaa cgattctacg agcctaccga tggagcggtg
1261 atgctggatg ggaacgatat cagatacttg gatcttaagt ggttaagagg tcatattggt
1321 ttggttaatc aagagcctgt cctgtttgca accacgattc gcgagaacat tatgtatggt
1381 aaagacgatg ccacctctga ggaaattacc aatgctgcaa agctctcgga agccatctca
1441 ttcatcaaca acctaccgga aggattcgaa actcaggtag gtgagagagg aattcagcta
1501 tctggcgggc agaagcagag gatcagtatt tctagggcga tagtgaagaa tccatcgatc
1561 ctcttactcg atgaggcaac aagcgcacta gatgcagagt cagagaaaat cgtgcaggaa
1621 gctttggaca gggtgatggt tgggagaaca acggtcgtgg tggctcatag actctccact
1681 gtaagaaacg ctgacatcat agccgttgtt ggaggaggga agatcattga gtccggaagc
1741 cacgacgaac tcatatctaa ccctgatgga gcttattctt ctcttcttcg tatccaagaa
1801 gctgccagcc ctaacttgaa ccacactcca agcttaccag tcagtacaaa acccttgccg
1861 gaactaccaa tcacggagac gacctcgtcc attcatcaat cagtaaacca accagatacg
1921 accaaacagg ccaaagtaac ggtgggacgt ctttactcta tgatccgtcc ggattggaaa
1981 tacggattat gtgggacgtt aggttccttt attgcgggat ctcaaatgcc gcttttcgcg
2041 cttggtatcg cacaggcttt agtatcttat tacatggact gggagacaac tcaaaacgag
2101 gtcaaaagaa tctctatcct cttctgttgt ggctccgtca tcactgtcat cgtacatacc
2161 attgagcata ccacctttgg tattatgggt gagcgtctca ctctccgagt ccgacaaaag
2221 atgttttcag cgatcttgag gaatgaaatc gggtggtttg ataaggttga taacactagt
2281 tcgatgttgg catcgcggct tgaaagtgat gcgactttgc ttagaaccat cgtggtcgat
2341 agatcgacaa ttctacttga gaatttaggt cttgttgtga ctgctttcat catttctttt
2401 atactcaact ggcgtctcac tcttgttgtc ttggccacat accccttgat tataagcggt
2461 catatcagcg agaaaatttt catgcaaggc tatggaggaa acttgagtaa agcgtattta
2521 aaggctaaca tgttggctgg agagtctatt agcaacatcc gaaccgtggt cgccttttgt
2581 gcagaggaga aggttttaga cctttattcc aaagagcttc tagaaccttc agaacgttct
2641 ttcaggcgtg gacagatggc cgggattttg tacggtgttt ctcaattctt catcttctcc
2701 tcctacggcc ttgccctctg gtacggatcg attttgatgg agaaaggatt atcaagtttc
2761 gaatctgtga tgaaaacatt catggttttg atagtaacgg cgttagtgat gggtgaagtg
2821 ttggctctag ccccagatct tcttaaagga aaccagatgg ttgtttcggt tttcgagcta
2881 ttggatcgaa gaacacaggt tgttggtgat actggtgagg agctgagtaa tgtggaaggc
2941 actatagagc tcaaaggtgt tcatttcagt tatccttcac ggcctgatgt gactattttc
3001 agcgatttca atctactagt tccttctggc aaaagcatgg cgcttgtggg acaaagcgga
3061 tctggaaaaa gttcggttct ttcgcttgtt ctccggttct acgatcctac agccggaata
3121 atcatgatag acgggcaaga catcaagaaa ctgaagttga aatcactgcg aagacacatt
3181 ggtctggttc aacaagaacc ggctctgttt gcaacgacta tctatgagaa catcttgtat
3241 ggtaaagaag gagcttctga atctgaagtc atggaagcag ctaagcttgc aaatgctcac
3301 agtttcatca gctctctccc tgaaggttac tcaaccaaag tcggtgaacg tggcattcag
3361 atgtcaggcg gccagagaca gagaattgct atagctagag ccgtcctcaa gaacccagag
3421 attctgcttc ttgatgaagc cacaagcgcc ttagatgttg aatcagagcg tgtggtacaa
3481 caggcaaaga tttacaagtt tatactaatg aattgcaggt acaacaagca ttggatcggc
3541 taatgagaga ccgaaccacg gtggtggtgg ctcaccggct atcgacgatc aagaactcag
3601 atatgataag tgtaatacaa gacggtaaga tcatagagca aggcagccac aatatcctcg
3661 ttgagaacaa gaatggtccc tactctaaac ttatcagtct tcagcagcgg cagcgccatc
3721 atccttaaga gttattattg aattatcaaa actcttggtt tttttttttt cttttctaaa
3781 tatcgatcct acatttatat tatatgatta tgtaactcat atttgattat gctattcatt
3841 cttgattcat tgttcaagga accgg
//