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Macaca mulatta GIPC PDZ domain containing family member 3 (GIPC3), mRNA

NCBI Reference Sequence: NM_001194162.2

FASTA Graphics 

LOCUS       NM_001194162            1055 bp    mRNA    linear   PRI 05-JUL-2020
DEFINITION  Macaca mulatta GIPC PDZ domain containing family member 3 (GIPC3),
            mRNA.
ACCESSION   NM_001194162 XM_001100669
VERSION     NM_001194162.2
KEYWORDS    RefSeq.
SOURCE      Macaca mulatta (Rhesus monkey)
  ORGANISM  Macaca mulatta
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Cercopithecidae; Cercopithecinae; Macaca.
REFERENCE   1  (bases 1 to 1055)
  AUTHORS   Zimin AV, Cornish AS, Maudhoo MD, Gibbs RM, Zhang X, Pandey S,
            Meehan DT, Wipfler K, Bosinger SE, Johnson ZP, Tharp GK, Marcais G,
            Roberts M, Ferguson B, Fox HS, Treangen T, Salzberg SL, Yorke JA
            and Norgren RB Jr.
  TITLE     A new rhesus macaque assembly and annotation for next-generation
            sequencing analyses
  JOURNAL   Biol. Direct 9 (1), 20 (2014)
   PUBMED   25319552
  REMARK    Publication Status: Online-Only
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            QNVO02000224.1.
            
            On Aug 8, 2017 this sequence version replaced NM_001194162.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA4688321,
                              SAMEA4688330 [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-264               QNVO02000224.1     1629210-1629473
            265-450             QNVO02000224.1     1630148-1630333
            451-631             QNVO02000224.1     1630466-1630646
            632-744             QNVO02000224.1     1632075-1632187
            745-826             QNVO02000224.1     1632459-1632540
            827-1055            QNVO02000224.1     1632667-1632895
FEATURES             Location/Qualifiers
     source          1..1055
                     /organism="Macaca mulatta"
                     /mol_type="mRNA"
                     /db_xref="taxon:9544"
                     /chromosome="19"
                     /map="19"
     gene            1..1055
                     /gene="GIPC3"
                     /note="GIPC PDZ domain containing family member 3"
                     /db_xref="GeneID:713364"
     exon            1..264
                     /gene="GIPC3"
                     /inference="alignment:Splign:2.1.0"
     CDS             40..978
                     /gene="GIPC3"
                     /codon_start=1
                     /product="PDZ domain-containing protein GIPC3"
                     /protein_id="NP_001181091.1"
                     /db_xref="GeneID:713364"
                     /translation="MEGAVAREAREAEAPRASAPPPAPSEPPAAPRARPRLVFRTQLA
                     HGSPTGKIEGFTNVRELYAKIAEAFGIAPTEILFCTLNSHKVDMQKLLGGQIGLEDFI
                     FAHVRGETKEVEVTKTEDALGLTITDNGAGYAFIKRIKEGSIINRIEAVCVGDSIEAI
                     NDHSIVGCRHYEVAKMLRELPKSQPFTLRLVQPKRAFDMIGQRSRSSKCPVEAKVTSG
                     RETLRLRSGGAATVEEAPSEFEEEASQKVDDLLESYMGIRDPELASTMVETSKKTVSA
                     QEFARCLDSVLGEFAFPDEFVVEVWAAISEAREACG"
     exon            265..450
                     /gene="GIPC3"
                     /inference="alignment:Splign:2.1.0"
     exon            451..631
                     /gene="GIPC3"
                     /inference="alignment:Splign:2.1.0"
     exon            632..744
                     /gene="GIPC3"
                     /inference="alignment:Splign:2.1.0"
     exon            745..826
                     /gene="GIPC3"
                     /inference="alignment:Splign:2.1.0"
     exon            827..1055
                     /gene="GIPC3"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcggcgaggg cccgggtggg tgaccgaact tctcccgcca tggagggcgc agtggcccgg
       61 gaggcccggg aggccgaggc cccgcgcgcg tctgcgcccc cgcccgcgcc ctcggagccc
      121 ccggctgcgc cccgcgcccg cccgcgcctg gtcttccgca cgcagctggc gcacgggagc
      181 cccacgggta agatcgaggg cttcaccaac gtccgcgagc tgtacgccaa gatcgccgag
      241 gccttcggga tcgcgcccac cgagatttta ttctgcaccc tcaacagcca caaagtggac
      301 atgcagaagc tcctaggggg ccagataggc ctggaggatt tcatctttgc ccacgtgcga
      361 ggcgagacca aggaggtgga ggtcactaag acagaggacg ctctggggtt gaccatcacg
      421 gacaacgggg ccggctacgc cttcatcaag agaatcaagg aaggcagtat catcaaccgg
      481 atcgaggcag tgtgcgtggg tgacagcatc gaagccatca acgaccactc cattgtgggc
      541 tgccgccact acgaggtggc caagatgctc cgggagctgc ccaagtccca gcccttcacc
      601 ctgcgcctgg tgcaacccaa gagggccttc gatatgattg gccagagaag tcggtccagc
      661 aaatgtcccg tagaggcgaa agtgaccagt gggagggaga ccctgcggct tcgttccggg
      721 ggggctgcca cagtggagga ggcgcccagt gagtttgagg aagaggcatc ccagaaggtt
      781 gatgacctgc tggaaagcta catgggcatt cgggaccccg agctggcgtc caccatggtg
      841 gagacgtcca agaagacagt gagcgcccag gagtttgcac gctgtttaga ctccgtcttg
      901 ggcgagttcg ccttccccga cgaatttgtg gtggaggtgt gggccgccat cagcgaggcc
      961 agggaggcct gtggctagtc tgccctgggg gagcccagca cagccccagc ctggagcccc
     1021 gccccctgcc ccagccctgc tccagaaccc agccc
//
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Reference sequence information

  • RefSeq protein product
    See the reference protein sequence for PDZ domain-containing protein GIPC3 (NP_001181091.1).

More about the gene GIPC3

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