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Escherichia coli strain MOD1-EC586, whole genome shotgun sequencing project

GenBank: NJLK00000000.1

  • This entry is the master record for a whole genome shotgun sequencing project and contains no sequence data.

LOCUS       NJLK01000000             341 rc    DNA     linear   BCT 14-MAY-2018
DEFINITION  Escherichia coli strain MOD1-EC586, whole genome shotgun sequencing
            project.
ACCESSION   NJLK00000000
VERSION     NJLK00000000.1
DBLINK      BioProject: PRJNA230969
            BioSample: SAMN06049497
KEYWORDS    WGS.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 341)
  AUTHORS   Gangiredla,J., Mammel,M.K., Barnaba,T.J., Tartera,C., Gebru,S.T.,
            Patel,I.R., Leonard,S.R., Kotewicz,M.L., Lampel,K.A., Elkins,C.A.
            and Lacher,D.W.
  TITLE     Species-Wide Collection of Escherichia coli Isolates for
            Examination of Genomic Diversity
  JOURNAL   Genome Announc 5 (50), e01321-17 (2017)
   PUBMED   29242221
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 341)
  AUTHORS   Gangiredla,J., Barnaba,T., Gebru,S., Mammel,M.K., Lacher,D.,
            Tartera,C., Patel,I.R., Leonard,S., Lampel,K.A. and Elkins,C.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JUN-2017) CFSAN-ORS-DM-MMSB, US Food and Drug
            Administration, 5100 Paint Branch Parkway, College Park, MD 20740,
            USA
COMMENT     The Escherichia coli whole genome shotgun (WGS) project has the
            project accession NJLK00000000.  This version of the project (01)
            has the accession number NJLK01000000, and consists of sequences
            NJLK01000001-NJLK01000341.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.8.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 40.4x
            Sequencing Technology  :: Illumina NextSeq 500
            ##Genome-Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..341
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="MOD1-EC586"
                     /serotype="O157:NM"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="USA"
                     /collection_date="1989"
                     /collected_by="CDC"
WGS         NJLK01000001-NJLK01000341
//
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