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NCBI Reference Sequence: NC_041762.1
FASTA Graphics
LOCUS NC_041762 6765 bp DNA linear CON 26-APR-2019 DEFINITION Macaca mulatta isolate AG07107 chromosome 9, Mmul_10, whole genome shotgun sequence. ACCESSION NC_041762 REGION: 101606587..101613351 VERSION NC_041762.1 DBLINK BioProject: PRJNA528504 BioSample: SAMN09435472 Assembly: GCF_003339765.1 KEYWORDS WGS; RefSeq. SOURCE Macaca mulatta (Rhesus monkey) ORGANISM Macaca mulatta Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca. COMMENT REFSEQ INFORMATION: The reference sequence is identical to CM014344.1. Assembly name: Mmul_10 The genomic sequence for this RefSeq record is from the whole-genome assembly released by The Genome Institute at Washington University School of Medicine on 2019/02/13. The original whole-genome shotgun project has the accession QNVO00000000.2. ##Genome-Assembly-Data-START## Assembly Provider :: The Genome Institute at Washington University School of Medicine Assembly Method :: HGAP4_SMRT_Link v. 5.0.1.9585 Assembly Name :: Macaca mulatta 2.0 Genome Coverage :: 66x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Macaca mulatta Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6765 /organism="Macaca mulatta" /mol_type="genomic DNA" /isolate="AG07107" /bio_material="Coriell:AG07107" /db_xref="taxon:9544" /chromosome="9" /sex="female" /tissue_type="fibroblast" gene 1..6765 /gene="TLX1" /note="Derived by automated computational analysis using gene prediction method: Gnomon." /db_xref="GeneID:711584" mRNA join(1..1138,3188..3389,5698..6765) /gene="TLX1" /product="T cell leukemia homeobox 1" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 10 ESTs, 7 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns" /transcript_id="XM_001109904.4" /db_xref="GeneID:711584" CDS join(553..1138,3188..3389,5698..5920) /gene="TLX1" /note="Derived by automated computational analysis using gene prediction method: Gnomon." /codon_start=1 /product="T-cell leukemia homeobox protein 1" /protein_id="XP_001109904.1" /db_xref="GeneID:711584" /translation="MEHLGPHHLHPGHAEPISFGIDQILNSPDQGGCMGPASRLQDGE YGLGCLVGGAYTYGGGGSAPGAGAGGAGAYGTGGPGGPGGPGGPGGPAGGGGACSMGP LAGSYNVNMALAGGPGPGGGGSSSGGAGALSAAGVIRVPAHRPLTGAVAHPQPLATGL PTVPSVPAMPGVNNLTGLTFPWMESNRRYTKDRFTGHPYQNRTPPKKKKPRTSFTRLQ ICELEKRFHRQKYLASAERAALAKALKMTDAQVKTWFQNRRTKWRRQTAEEREAERQQ ANRILLQLQQEAFQKSLAQPLPADPLCVHNSSLFALQNLQPWSDDSTKITSVTSVASA CE" ORIGIN 1 gggaagacag ttgacttcac cctccttgag tttgtctgtc tgtccgtctc tgggaatggt 61 cgcttcttgt tttccctttt ccttttaagc ctctcctttt tcccctcttc tctctcctca 121 tgaactactc cgagtcttgg tctccgtctc tctatctctg gctcctgcat ctgtctcggc 181 ttctggcctt cctctccccc tcccctcccc tccctcgcgc tgtcattcac cccgctcctc 241 tccgcgcaca gccaatggag agacccggcc gaaaccgcga agctctcttg caccgggctt 301 tttcgcctgg tgattgatgt cccagagtca acagcgagcg gagccggagc cgggaagcag 361 aagccagaga ggggaagaat acggcccccc tctccctccc ctcccccttc tactttagcc 421 cttctgcgca cttcgcttcc aagtctccgc gcagccagga gccgctgttg cctcccagcc 481 cctgctagct gcccccggag ccgagcgcag cgagcgccgc cgcccgggcc cccccgtggg 541 gccggggcta gcatggagca cctgggaccg caccacctcc acccgggcca cgcagagccc 601 atcagcttcg gcatcgacca gatcctcaac agcccagacc agggtggctg catggggccc 661 gcctcgcgcc tccaggacgg agaatacggc cttggctgct tggttggagg cgcctacact 721 tacggcggcg ggggctccgc gcccggggct ggggctggag gcgcgggggc ctatggcact 781 ggaggtccgg gcggccccgg aggccccggc ggccccggag gcccggcagg cggcggcggc 841 gcctgcagca tgggtccgct ggccggctcc tacaacgtga acatggcctt ggcgggcggc 901 cccggtcctg gcggcggcgg tagcagcagc ggcggtgcgg gggcactcag cgctgcgggg 961 gtgatccggg tgccggcaca caggccgctc accggagccg tggcccaccc ccagccgctg 1021 gccaccggct tgcccaccgt gccctctgtg cctgccatgc caggcgtcaa caacctcact 1081 ggcctcacct tcccctggat ggagagtaac cgcagataca caaaggacag gttcacaggt 1141 gagtccggcc tgcgcgcgcg cctcgcctgg ccgcggcccg ggctctgtgt taccctttcc 1201 ccgccggctg gctccccaaa gccggttctg tgcgccaggt cgcccacctc ttcttggtgc 1261 ttcccccaag ttgagccgcc cgcccgattc tacatcgcag actcgccatg cttgaagaat 1321 tctctcagcc tggacccctc tctgtctccc aaaggacccc tgctcagaga agctctccct 1381 ggtctcctct cgggatccct gggcccggtc aggcagagaa gaaggccata gattgaggac 1441 caccttctgc agctactccg ggtccgggaa tcttagagaa aggggtgcaa tgtgaacagt 1501 ttcttccgtc ctggctgcag ttctaggacc gaagaagcca gccccaggat cagacgcaag 1561 aaaagaacag gttcccccac cttcagtacc ctacacacat gcactccgcg ctcctagctc 1621 cggtgcccgt ggtgctgcgg ggccagcggg agctctgagc tccagtaaat cagcagaacc 1681 agtggccctt ttttttccca gagaggaggc ttcgtctggg aggatggcag cggggcatag 1741 ccgcccagga cagctagctt ttcattttcg ttctgtccgg gctgcatgtc ctaccccggg 1801 cccagccctg ttatcttggg catgaataat gcactgggca ggccagtgat cggtggcggg 1861 aggactactc ccaggacatt aggtactagg tggtggccgc tgccgccgtc tctgctgccc 1921 actcctgcct tcctctgctg gccctggctc cctctgctgc cgtttctgct ctggacactc 1981 aactctccct ctggtgtggg tcccttcccc tgttctcact tcctgctccc cttaggactc 2041 cctggatccc agaccatgat cctcccgtcc cgcctgggaa gcagccacaa attgagccca 2101 ggttagccag ctggccttag agagaggagg caggagacac tggctgctgc tggcagagac 2161 cgggactcct ggggatcccc tggctcaagg gaccaacagt ggaagggggt atacataact 2221 acttgggaga agctgctgag agtcagacac tgggccagga gaccccgagg cacccctgac 2281 tccctgcttc tgttccaggc aggagcacgg tcagggaaac tgctcctgca gcttcttacc 2341 agactctggg gccacagcag aagtggtgtg ggggctggtg tccagacgaa gaacagttgc 2401 ttgggtctag acctcaggaa gggccctcgc tgagaaaaac ccaagttttc tctggcctgg 2461 ggcagcaggg cctggtgccc atcccattcc ccacccaggc caggccagtc ttgaagggcc 2521 ctgctggaac cccagcccag agtctactaa tcctgggcct ctggtgaaag gtactcggtt 2581 tagggcctac ctcggggccc taatactgtg tcaggcatga aggagttttg agcgagtgta 2641 tggctgtggc cttgtgttgc tctgtgtcct gtgtttttgt cccgtgcctg tgcttgtctg 2701 gtcctgtttg ggtgtataga tctatgagtt tgcccccgtt gtacgttgtg tcggtgtgtg 2761 ctgctgtgga cagaggctca ggtcgggttc cagagtcagg ttcggtctcc tactctgagc 2821 ctgaaggtct ggggctgact gaggggaggg gagcgtgacc attagctcgc cttagactgc 2881 cccttggagg aggggcggca gggtggtggt tgggctcgcg ggagcccggg gctagggagg 2941 cctctgtggt agctgcgaag gcggcgttcg actggcgggc aggagggggc cgtttcccgc 3001 cgtgggcttg gtgctgaggg ctaacgggag gatctcggcc ctgctcgtgg gagttcagct 3061 gctgcgctcg ctgattcgcg gggtgttggg cctgggacgc ttcctgacgc tctgctgctt 3121 gcctctgccg tctgtctgtc tcccgctcca gtggccctct cacccttcac tgtaacacgc 3181 cgtataggtc acccctatca gaaccggacg ccccccaaga agaagaagcc gcgtacgtcc 3241 ttcacacgcc tgcagatctg cgagctggag aagcgcttcc accgccagaa gtacctggcc 3301 tcggccgagc gcgccgccct ggccaaggcg ctcaaaatga ccgacgcgca ggtcaaaacc 3361 tggttccaga accggcggac aaagtggagg tgagcaagct gggcgggccg gcagcccgcg 3421 agcggcgcgg tctcaggcag ctgtcggttc gtggcctttt ctggtgcgca cacactttct 3481 ccgctcgcgg tttctgatcc tttcggagga gcgagctccc gctaggtttg cggggagctg 3541 gaagcaacgg aggcaggccg atagctggga tggggctgaa gggccctggc tctgttttac 3601 cagaggcttc agggctttct ggctggcaca ctctctgccg gtgtagatgc ggcaggtttc 3661 ttccgccgct ttggcaaaca ggcgggttcg tgcagtccac gcagtccagg ctccagggat 3721 ctgtgtgtcc tggggagttt tttgtttgcg caaactcttg cttatggaat cctgctctgt 3781 cccggagact gcatgcagat cggcccgcac cttgttgcag cgctccaacc gggctctccg 3841 cagagggtct gggggcccca gaccgcggcc gtgttgacgg tctcctcccc agacgccagg 3901 cttttgggca gccggtccct accctggaag gagaaaatca atccgcgccg gctgcggcgg 3961 ggtttggcgg gtcccactga aaggggaatc aattaggagc agatgggtgt gtgtgagaaa 4021 gagaattttc ccttctccca tagccgcaac tccagttact acgcactggg ttttttgttt 4081 tgttttttca catttacgct caaggacatg aagcgtcccc aacactccca agcagcctcc 4141 ctctccgcgc gcactgaagc tttctccggc tgctccctct ggcacgctgc accctcccgc 4201 acatctggcc cttgcccgcc ggagtttctc ccctagctca ggcccagtgg ggcagcgcgg 4261 gaaagtctgg gcgaagtcgg cggcgccgag acgggcgggc cttggggcag gaggaaggaa 4321 ttggagtttc ctctttttct gaacgaaggc gaggaatctg cctgggattc cgcctacggg 4381 gccacaaagg aagccatggt cccgcgattc taccgcaccc cacagcattc ctgccgctgg 4441 ggaaggagtg ggggatgcgg cctcagacct tggaacgcta aagagggagc cagggctagc 4501 tcaggagttg ggggggactc cagtttccaa ggcctactga gggctgcggg cctaggggag 4561 gagaggcagc ctagcaggcc tcccagagag aggggcacag agaaagaaag aggcaggcaa 4621 agagagaaac tgaaacacaa tcagtttcag gggtgggaag ggatagggag cccgctgaag 4681 gaaaaaaagg aggaaaacag gcagcctaca gaagtcttat ttatgtataa taaagaaaag 4741 caatggatga ctgaaatcaa cattttcttt tcaaacaaat tcctttaatt cagagagaac 4801 caagtgggtg gggaggagag aaaatgagag agaagacaca aagcataaaa gagaaatatt 4861 caggccgttt gaaatgcagg ggaaagggga aagacgaaag acagaaagat acacagtcaa 4921 gaaaaggcgg cccagagcag gtcagcagcc gctgctgaca gaggcccttg caggcttcgc 4981 atggcttcat cgatcgccta caaattgctt ctgaaggccc cggggactcc cattaggtct 5041 gtccacctta gagacagacg tttgatctca gttgacaggg tggaggggag gcattaaatg 5101 gaataagtga gtcattgcct ccctgaactg cctcagagga agccagtggg tccagcagga 5161 gcccctgcag ggcacagggc tccacacaga aggcccaagg cctagaagac attcgcagag 5221 agagggaggc aagagacgtc ctgcagagca gatcatagcc gctggtcctt gcctctctac 5281 cctggacttg tgggtagggt gagggccctc cggcttggaa tggcacctgg tctccctcag 5341 ggcggggggg gggggcgggg aagcgagatg ccatcctacc cctggctgcc ccttgtgagg 5401 cctgcggggt gtgggcgctg ctcgtggatg cggaatccca gctgtttggg cctggcagac 5461 tttcccaccc ctccttctct gggatacctt ggctccatct gctttggggt ttctagtctt 5521 tgttggagtc aggactctca aaagaaggga acgcattata ggggcccaaa ctggatttgg 5581 ggactgcaaa agcgagcagc gctcgttcag tttatctcct gggaactcac ccggagctgg 5641 gcgcacgcgg gagccgggtc ggtgctcctg gcaggtaacg gcttgttccc ggtgcagacg 5701 gcagactgcg gaggaacggg aggccgagag gcagcaagcg aaccgcatcc tcctgcagtt 5761 gcagcaggag gccttccaga agagcctggc acagccgctg cccgccgacc ctctgtgcgt 5821 gcacaactca tcgctcttcg ccctgcagaa tctgcagccg tggtctgacg actcgaccaa 5881 aatcactagc gtcacgtcgg tggcgtcggc ctgcgagtga gcctgcccat tctgccctgt 5941 gggaccccag gcccactcag gggtcactga ggcctgagac ccaggactcc tccccacctt 6001 tcctggcctc agactgcacc caggagggga acactgccct cccacggcac cgaagggccc 6061 ccacatttgt gccgacactg ttctctcttc ggtggaagaa gagctcaagg gataaggaca 6121 cgcgccccct cccagacgcg tcccgcaccc atctgaactg ttaagaaatc tctgtttttg 6181 tttatttcat tttattttaa tttttaacgt gggattcaga gagaggcaag ggaggtaggg 6241 gaggaggagc ttcttaggtc cccagggcta tcatctgaat ttgccctggg aaaccccttc 6301 tctgtgaccc acttctcatc acacacatgg aaacccatag gcccacacag aggtggtgtc 6361 actgtccctc ctggtgtcac cccagagcca cccatgggca tctatggcag agtgtcatcc 6421 agacacaggg tcacagacac aggtcacggg tgacacacac tcatcctgaa cggcatggca 6481 ctccctccag cacaaacaca aggtcaaggc cacactgtgg cacactacac catacacaac 6541 agccacaaca gcctcatttg gtctgccagg cccctaccac acatcccagc ccaacccagg 6601 tatgcacaga cagattttca cataaatgca gcccatttct ccagaaccca ttttgggggg 6661 gggggtgtta agttatgcac ttataaggtg ttttctgtgt aaccatttta taaagtgctt 6721 gtgtaattta tgtggaaaaa ataaataaaa gcctccggat ccgga //
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