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Escherichia coli strain UMDKSU-2013-3-75E, whole genome shotgun sequencing project

GenBank: MVND00000000.1

  • This entry is the master record for a whole genome shotgun sequencing project and contains no sequence data.

LOCUS       MVND01000000             118 rc    DNA     linear   BCT 03-MAR-2017
DEFINITION  Escherichia coli strain UMDKSU-2013-3-75E, whole genome shotgun
            sequencing project.
ACCESSION   MVND00000000
VERSION     MVND00000000.1
DBLINK      BioProject: PRJNA342435
            BioSample: SAMN06220094
KEYWORDS    WGS.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 118)
  AUTHORS   Noll,L.W., Worley,J.N., Yang,X., Shridhar,P.B., Bai,J., Meng,J.,
            Caragea,D. and Nagaraja,T.G.
  TITLE     Whole-Genome Draft Sequences of 13 Non-pathotype Escherichia coli
            O103 Strains Isolated from Feces of Feedlot Cattle
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 118)
  AUTHORS   Noll,L.W., Worley,J.N., Yang,X., Shridhar,P.B., Bai,J., Meng,J.,
            Caragea,D. and Nagaraja,T.G.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-FEB-2017) Diagnostic Medicine & Pathobiology, Kansas
            State University, 308 Coles Hall, Manhattan, KS 66506, USA
COMMENT     The Escherichia coli whole genome shotgun (WGS) project has the
            project accession MVND00000000.  This version of the project (01)
            has the accession number MVND01000000, and consists of sequences
            MVND01000001-MVND01000118.
            Bacteria and source DNA available from TG Nagaraja, 305 Coles Hall,
            Kansas State Unversity, Manhattan KS, 66506.
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 23-DEC-2015
            Assembly Method        :: SPAdes v. 3.6.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 43.80659868x
            Sequencing Technology  :: Illumina MiSeq
            ##Genome-Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..118
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="UMDKSU-2013-3-75E"
                     /serotype="O103"
                     /isolation_source="feces of feedlot cattle"
                     /host="Bos taurus"
                     /db_xref="taxon:562"
                     /geo_loc_name="USA: NE"
                     /collection_date="18-Jun-2013"
                     /collected_by="Kansas State University Pre-harvest Food
                     Safety Laboratory"
WGS         MVND01000001-MVND01000118
//
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