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Drosophila melanogaster FI17849 full insert cDNA

GenBank: BT133091.1

FASTA Graphics 

LOCUS       BT133091                4852 bp    mRNA    linear   INV 19-JAN-2012
DEFINITION  Drosophila melanogaster FI17849 full insert cDNA.
ACCESSION   BT133091
VERSION     BT133091.1
KEYWORDS    FLI_CDNA.
SOURCE      Drosophila melanogaster (fruit fly)
  ORGANISM  Drosophila melanogaster
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
REFERENCE   1  (bases 1 to 4852)
  AUTHORS   Carlson,J., Booth,B., Frise,E., Park,S., Wan,K., Yu,C. and
            Celniker,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-JAN-2012) Berkeley Drosophila Genome Project,
            Lawrence Berkeley National Laboratory, One Cyclotron Road,
            Berkeley, CA 94720, USA
COMMENT     Sequence submitted by:
            Berkeley Drosophila Genome Project
            Lawrence Berkeley National Laboratory
            Berkeley, CA 94720
            This clone was sequenced as part of a high-throughput process to
            sequence clones from the Drosophila Gene Collection. The sequence
            has been subjected to integrity checks for sequence accuracy,
            presence of a polyA tail and contiguity within 200 kb in the
            genome. Thus we believe the sequence to reflect accurately this
            particular cDNA clone. However, there are artifacts associated with
            the generation of cDNA clones that may have not been detected in
            our initial analyses such as internal priming, priming from
            contaminating genomic DNA, retained introns due to reverse
            transcription of unspliced precursor RNAs, and reverse
            transcriptase errors that result in single base changes. For
            further information about this sequence, including its location and
            relationship to other sequences, please visit our Web site
            (http://www.fruitfly.org) or send email to cdna@fruitfly.org.
FEATURES             Location/Qualifiers
     source          1..4852
                     /organism="Drosophila melanogaster"
                     /mol_type="mRNA"
                     /db_xref="taxon:7227"
     gene            1..4852
                     /gene="Pkn-RC"
                     /map="2R"
                     /db_xref="FLYBASE:FBtr0088602"
     CDS             384..4607
                     /gene="Pkn-RC"
                     /note="Longest ORF"
                     /codon_start=1
                     /product="FI17849p1"
                     /protein_id="AEX98011.1"
                     /db_xref="FLYBASE:FBtr0088602"
                     /translation="MSDSYYQGEYIKHPVLYELSHKYGFTENLPESCMSIRLEEIKEA
                     IRREIRKELKIKEGAEKLREVAKDRRSLSDVAVLVKKSKSKLAELKSELQELESQILL
                     TSANTAVNSNGQESITACIDPNGGFLVSGAVGGLGGGNTALEGGAPATANDKVLASLE
                     KQLQIEMKVKTGAENMIQSLGIGCDKKLLAEAHQMLADSKAKIEFLRLRIIKVKQNRE
                     QADRLKASRQMIDEHGQTIGGNNSSQPQSLETTLEERIEELRHRLRIEAAVVDGAKNV
                     IRTLQTANRAPDKKALQEAHGRLSESSRKLDLLRYSLDLRRQELPADSPAAQQLKTEL
                     QIVQLSTSPAPVTYTSLQSGQAGILGGKPYQSVSSLGRCASVTGKLEVRLLGCQDLLE
                     DVPGRSRRDKDNNSSPGDLRSFVKGVTSRSSSKSYSVKDETSIEIMAVIKLDNITVGQ
                     TSWKQCSQQAWDQRFSIDLDRSRELEIGVYWRDWRSLCAVKVLRLEEFIDDVRHGMAL
                     QLEPQGLLFAEVKFLNPMISQKPKLRRQRMIFNRQQAKNISRAKQMNINVATWGRLLK
                     RNAPNHVHMGSAGSGSSLTGSSPMVVGGSRDSESPISRTPSSDALVEPEPYTPGEQAQ
                     NLEFDPDAGINEHVETPGEYPDPAASGLSGMRPLSMHMQGISVLPPESPPVATGAAGR
                     PNTLSLQMPGASKGQVIQGGRTAAPTTAPPPPPVLKATSTTPILDQELQDALHEFDFL
                     SDLDSRPTTLRRLLKEQKMALDAGALENLLLQQQQTEQQALQQRQRQEQLRLQQFQEA
                     QRQAILDLCVKQREPAEQTSPTLANQTPTFPPLASNQIMPSLNARPCQSQSPNHNEFQ
                     LQPQPPHPAQKPTNPEPPSAVEQQLHRPVLILPPVVLLGGREEDRSVPPSPLVEYPED
                     DDEYLYRGSNENLGTRLHSSHSSSAGDRFCVEVIPQLGKLYVGSSQQQYAQQSSPIIQ
                     EPATPTIYGNSAAAGAPQFPQPAQRQEKQPPQQQPIYANQYELNVAKAAAAASVYSPS
                     SSTTSNSNQQQQQQRRNVARGLQYRESGGLETGRAGKQPPNAGMLSMDNFRLLSVLGR
                     GHFGKVILSQLRSNNQYYAIKALKKGDIIARDEVESLLSEKRIFEVANAMRHPFLVNL
                     YSCFQTEQHVCFVMEYAAGGDLMMHIHTDVFLEPRAVFYAACVVLGLQYLHENKIIYR
                     DLKLDNLLLDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVD
                     WWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEAIAVMRRLLRKNPE
                     RRLGSSERDAEDVKKQAFFRSIVWDDLLLRKVKPPFVPTINHLEDVSNFDEEFTSEKA
                     QLTPPKEPRHLTEEEQLLFQDFSYTAEWC"
ORIGIN      
        1 cgtgtgtgtt gggttgtact tttgcgtttt aaattacaaa aacacaaata aatacagtgt
       61 ttatttattg gaagcagtcg gcgttatgat ttgaaaatag gagaaatcaa atgagagcgc
      121 attcgataaa aagagataaa gaaaatactg ttcggcatca ggtgttaaag tgctaaacaa
      181 ttccgaaagc caaaggaaag taaacaaaaa cgcgacgcgt gtgcttgtgc ttgtgtgcgg
      241 cgccaataaa agccaaaagc aaaatactga caaccaaaaa gatacacgca acaacaagaa
      301 ccatattcat aataaccaac aactaaatac tacaacaaga agctacggca tcgagtgatt
      361 caacgcggcg caccaaataa accatgtcgg attcgtatta tcagggcgaa tacatcaagc
      421 atcccgttct gtacgagctc agtcacaaat atggtttcac agagaatctg ccggagagct
      481 gtatgtccat acggctggag gagatcaagg aggccattcg gcgagagatc cgcaaggagc
      541 tgaagatcaa agagggcgcc gagaagctcc gcgaggtggc taaagatcga cgatccctca
      601 gcgatgtggc cgttcttgtc aagaagagca aaagtaaact tgccgagctg aagtccgagt
      661 tgcaggagct cgagagtcaa atcctcctga catcggccaa caccgccgtc aatagtaatg
      721 gacaagaatc gatcactgcc tgcattgatc ccaatggcgg cttcttggtc agcggtgcag
      781 ttggtggctt gggcggcgga aacacggctc tggagggcgg cgcaccggcc actgccaatg
      841 acaaagtgct cgcctcgctg gagaagcagc tgcagatcga gatgaaggtg aagaccgggg
      901 cggaaaacat gatccagtcg ctgggcatcg gatgcgacaa gaagctgctg gcggaagccc
      961 accagatgct ggccgactcg aaggccaaga ttgagttttt gcgcctgcgc atcatcaagg
     1021 tgaaacagaa ccgcgagcag gccgatcgcc tcaaggcctc gcgccagatg atcgacgagc
     1081 atggccagac gatcggcggg aacaacagca gccagccgca gagcctggag acgacgctgg
     1141 aggagcgaat cgaggagctc cgccatcgac tgcgaatcga ggcagccgtc gtcgatggag
     1201 ccaagaatgt tatacgcacg ctgcagacgg cgaatagggc accggacaag aaggctttgc
     1261 aggaggccca tggacgtttg tcggaatcgt cgcgaaaact agatctcttg cgctactcct
     1321 tggatttacg acgccaggag ctgcccgccg attcgcccgc cgcccagcaa ttaaaaacgg
     1381 agctgcagat cgtccagcta tcgacctccc cagctccggt cacctacacg tcactgcagt
     1441 ccggacaagc gggcatactc ggcggaaagc cgtaccagtc ggtatcctcg cttggacgct
     1501 gtgccagtgt caccggaaaa ctggaggttc gcttgctggg ctgtcaagat ttgctggaag
     1561 atgtgcccgg tagatcgagg agggacaagg acaacaactc aagtccgggt gatttacgaa
     1621 gcttcgtcaa gggcgtcacg tcgcgcagca gttcaaagag ctattcggta aaggatgaga
     1681 cgtccattga gatcatggcg gtcatcaagc tggacaatat caccgttggc cagacatcgt
     1741 ggaagcaatg ctcgcagcag gcctgggatc agcgcttctc catcgatcta gaccggtcgc
     1801 gcgaactgga gattggagtt tactggcgcg actggcgatc cctgtgcgcc gtaaaggtgc
     1861 tgcgccttga agagttcatc gacgatgtac gacatggcat ggcattgcag ctggagccac
     1921 aaggtctgct atttgcggag gtcaagttct tgaaccccat gatttcacag aagccaaagc
     1981 tgaggcgcca gcgtatgatc ttcaacaggc agcaagcgaa gaacatctcg cgggccaagc
     2041 agatgaacat taatgtggcc acatggggcc gcctgcttaa gcggaatgct cctaaccatg
     2101 tgcacatggg atcggcagga tcaggatctt ctctaaccgg tagctcgcct atggtggttg
     2161 gtgggtctcg cgactctgag tctccgattt cgaggactcc ctcatccgac gcactggtgg
     2221 aaccggagcc ctacacgccc ggagagcagg cacagaactt ggaattcgat cccgatgcag
     2281 gaattaatga acacgtggag acgccaggtg aatacccgga tccggcggcc agtggtctga
     2341 gcggaatgcg acccctgtcc atgcacatgc agggaattag tgtgctgccc ccggaatcgc
     2401 cacccgtggc caccggagca gctggtcggc ccaatacgct cagcttacag atgccgggtg
     2461 ccagtaaagg acaggtgatc caaggcggac ggactgcggc gcctacaacg gcgccaccgc
     2521 caccacctgt gctcaaggcg acatccacca ctccgatatt ggatcaggag ctgcaggatg
     2581 ccctgcacga attcgatttc ctgtcggacc tggactcacg tcccaccacg ctgcgtcgcc
     2641 tgctgaagga gcagaagatg gcgctggatg ccggcgcgct ggagaatctg ctgctgcagc
     2701 agcaacagac tgagcagcag gcactgcagc agcgccagcg ccaggagcag ctgcgtctgc
     2761 agcagtttca ggaggcgcag cgccaggcga tcctggacct gtgcgtgaaa cagagagagc
     2821 ccgcggagca gacatcaccc acccttgcca accaaacgcc gacgttccca ccgcttgcca
     2881 gcaatcagat catgccaagc ttaaatgccc gcccttgcca aagccaaagc ccaaaccaca
     2941 acgaatttca gttgcagccg cagccaccac atcccgccca gaaaccgacg aatcccgaac
     3001 caccgtccgc tgtggaacag cagctgcacc gtccggtcct aatcctgccg cccgtggtgc
     3061 tcctgggtgg tcgggaggag gaccgttcgg tgccaccatc gccactagtc gagtatcccg
     3121 aggacgacga cgagtatctg tatcgtggta gcaacgaaaa cctgggcacc aggctgcact
     3181 ccagccacag ttccagtgcc ggcgatcgtt tctgtgtgga ggttatacca cagttgggga
     3241 agctttacgt gggcagtagc cagcagcagt atgcgcagca gtcatcgccc atcatccagg
     3301 agccagctac tcctactatt tacggaaaca gcgccgcagc cggagcgccg cagttcccgc
     3361 agcccgccca aaggcaagag aagcagcctc cgcagcagca gcccatctac gctaaccagt
     3421 atgagctgaa tgtggccaag gcggcagctg cagcatctgt ttactcaccc agctcctcca
     3481 ccaccagcaa ctccaatcaa cagcagcagc agcagcgccg gaatgtggcc cgtggactgc
     3541 agtatcgtga atctggagga ctcgagactg gacgtgctgg caagcagcca cccaatgcgg
     3601 gcatgttgtc aatggacaac ttccgtttgc taagcgttct tggtcgcggc cactttggca
     3661 aggtgattct gtcccaattg cgaagcaaca accagtacta cgctattaag gcactgaaga
     3721 agggagacat cattgcccgc gacgaagtgg agtccctgct tagcgaaaag cgcatcttcg
     3781 aggtggccaa cgccatgcgc catccgttct tagttaactt gtattcgtgc ttccagactg
     3841 agcaacacgt atgctttgtg atggaatacg ctgctggcgg agatttgatg atgcacatcc
     3901 acacggacgt gttcctagag ccgagagccg ttttctacgc cgcttgtgtg gttctgggcc
     3961 tgcagtacct gcacgagaac aagatcatct accgggacct gaagctggac aatttgcttt
     4021 tggacacgga aggatatgtg aaaattgcgg actttggttt gtgcaaggag ggcatgggct
     4081 ttggtgatcg cacgggcact ttctgtggta cgcccgagtt tctggcaccg gaagtgctca
     4141 cggaaacttc ctacacacga gctgtggatt ggtggggctt gggtgtgttg atctttgaga
     4201 tgttggttgg tgagtcccca ttccctggtg acgatgagga ggaagtattc gattcaattg
     4261 tcaacgatga ggtgcgctat ccgcgcttcc tatcgctgga ggccatagcc gtgatgcgta
     4321 ggcttttgcg caagaatcca gagagacgtc tgggatcttc ggaacgggat gcggaggatg
     4381 ttaagaaaca ggcattcttc cggtcaattg tgtgggatga cctgctcctg cgaaaggtta
     4441 aaccaccatt tgtgccgaca attaaccact tggaggatgt gtcaaacttt gacgaggagt
     4501 tcacgtcgga gaaggctcag cttacgccac cgaaggagcc gcgacacttg accgaggagg
     4561 agcagttgct cttccaggac ttttcataca cggccgaatg gtgttagaag ctcattctta
     4621 gttcaaggat ttactaacgg gcctagcccg atccttatag cctatggcct gcttttgctt
     4681 ttacttgtgt acgaaattgg tttcgagtaa ttttacttgg cttagtagtc gatgtgagtt
     4741 caatatttat acatgaagac agcatgataa tacagataca ggacatatat atttataaac
     4801 tatatctata tagaaaatac atctactaac gagagaaaaa aaaaaaaaaa aa
//
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