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GenBank: BT133091.1
FASTA Graphics
LOCUS BT133091 4852 bp mRNA linear INV 19-JAN-2012 DEFINITION Drosophila melanogaster FI17849 full insert cDNA. ACCESSION BT133091 VERSION BT133091.1 KEYWORDS FLI_CDNA. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE 1 (bases 1 to 4852) AUTHORS Carlson,J., Booth,B., Frise,E., Park,S., Wan,K., Yu,C. and Celniker,S. TITLE Direct Submission JOURNAL Submitted (19-JAN-2012) Berkeley Drosophila Genome Project, Lawrence Berkeley National Laboratory, One Cyclotron Road, Berkeley, CA 94720, USA COMMENT Sequence submitted by: Berkeley Drosophila Genome Project Lawrence Berkeley National Laboratory Berkeley, CA 94720 This clone was sequenced as part of a high-throughput process to sequence clones from the Drosophila Gene Collection. The sequence has been subjected to integrity checks for sequence accuracy, presence of a polyA tail and contiguity within 200 kb in the genome. Thus we believe the sequence to reflect accurately this particular cDNA clone. However, there are artifacts associated with the generation of cDNA clones that may have not been detected in our initial analyses such as internal priming, priming from contaminating genomic DNA, retained introns due to reverse transcription of unspliced precursor RNAs, and reverse transcriptase errors that result in single base changes. For further information about this sequence, including its location and relationship to other sequences, please visit our Web site (http://www.fruitfly.org) or send email to cdna@fruitfly.org. FEATURES Location/Qualifiers source 1..4852 /organism="Drosophila melanogaster" /mol_type="mRNA" /db_xref="taxon:7227" gene 1..4852 /gene="Pkn-RC" /map="2R" /db_xref="FLYBASE:FBtr0088602" CDS 384..4607 /gene="Pkn-RC" /note="Longest ORF" /codon_start=1 /product="FI17849p1" /protein_id="AEX98011.1" /db_xref="FLYBASE:FBtr0088602" /translation="MSDSYYQGEYIKHPVLYELSHKYGFTENLPESCMSIRLEEIKEA IRREIRKELKIKEGAEKLREVAKDRRSLSDVAVLVKKSKSKLAELKSELQELESQILL TSANTAVNSNGQESITACIDPNGGFLVSGAVGGLGGGNTALEGGAPATANDKVLASLE KQLQIEMKVKTGAENMIQSLGIGCDKKLLAEAHQMLADSKAKIEFLRLRIIKVKQNRE QADRLKASRQMIDEHGQTIGGNNSSQPQSLETTLEERIEELRHRLRIEAAVVDGAKNV IRTLQTANRAPDKKALQEAHGRLSESSRKLDLLRYSLDLRRQELPADSPAAQQLKTEL QIVQLSTSPAPVTYTSLQSGQAGILGGKPYQSVSSLGRCASVTGKLEVRLLGCQDLLE DVPGRSRRDKDNNSSPGDLRSFVKGVTSRSSSKSYSVKDETSIEIMAVIKLDNITVGQ TSWKQCSQQAWDQRFSIDLDRSRELEIGVYWRDWRSLCAVKVLRLEEFIDDVRHGMAL QLEPQGLLFAEVKFLNPMISQKPKLRRQRMIFNRQQAKNISRAKQMNINVATWGRLLK RNAPNHVHMGSAGSGSSLTGSSPMVVGGSRDSESPISRTPSSDALVEPEPYTPGEQAQ NLEFDPDAGINEHVETPGEYPDPAASGLSGMRPLSMHMQGISVLPPESPPVATGAAGR PNTLSLQMPGASKGQVIQGGRTAAPTTAPPPPPVLKATSTTPILDQELQDALHEFDFL SDLDSRPTTLRRLLKEQKMALDAGALENLLLQQQQTEQQALQQRQRQEQLRLQQFQEA QRQAILDLCVKQREPAEQTSPTLANQTPTFPPLASNQIMPSLNARPCQSQSPNHNEFQ LQPQPPHPAQKPTNPEPPSAVEQQLHRPVLILPPVVLLGGREEDRSVPPSPLVEYPED DDEYLYRGSNENLGTRLHSSHSSSAGDRFCVEVIPQLGKLYVGSSQQQYAQQSSPIIQ EPATPTIYGNSAAAGAPQFPQPAQRQEKQPPQQQPIYANQYELNVAKAAAAASVYSPS SSTTSNSNQQQQQQRRNVARGLQYRESGGLETGRAGKQPPNAGMLSMDNFRLLSVLGR GHFGKVILSQLRSNNQYYAIKALKKGDIIARDEVESLLSEKRIFEVANAMRHPFLVNL YSCFQTEQHVCFVMEYAAGGDLMMHIHTDVFLEPRAVFYAACVVLGLQYLHENKIIYR DLKLDNLLLDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVD WWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEAIAVMRRLLRKNPE RRLGSSERDAEDVKKQAFFRSIVWDDLLLRKVKPPFVPTINHLEDVSNFDEEFTSEKA QLTPPKEPRHLTEEEQLLFQDFSYTAEWC" ORIGIN 1 cgtgtgtgtt gggttgtact tttgcgtttt aaattacaaa aacacaaata aatacagtgt 61 ttatttattg gaagcagtcg gcgttatgat ttgaaaatag gagaaatcaa atgagagcgc 121 attcgataaa aagagataaa gaaaatactg ttcggcatca ggtgttaaag tgctaaacaa 181 ttccgaaagc caaaggaaag taaacaaaaa cgcgacgcgt gtgcttgtgc ttgtgtgcgg 241 cgccaataaa agccaaaagc aaaatactga caaccaaaaa gatacacgca acaacaagaa 301 ccatattcat aataaccaac aactaaatac tacaacaaga agctacggca tcgagtgatt 361 caacgcggcg caccaaataa accatgtcgg attcgtatta tcagggcgaa tacatcaagc 421 atcccgttct gtacgagctc agtcacaaat atggtttcac agagaatctg ccggagagct 481 gtatgtccat acggctggag gagatcaagg aggccattcg gcgagagatc cgcaaggagc 541 tgaagatcaa agagggcgcc gagaagctcc gcgaggtggc taaagatcga cgatccctca 601 gcgatgtggc cgttcttgtc aagaagagca aaagtaaact tgccgagctg aagtccgagt 661 tgcaggagct cgagagtcaa atcctcctga catcggccaa caccgccgtc aatagtaatg 721 gacaagaatc gatcactgcc tgcattgatc ccaatggcgg cttcttggtc agcggtgcag 781 ttggtggctt gggcggcgga aacacggctc tggagggcgg cgcaccggcc actgccaatg 841 acaaagtgct cgcctcgctg gagaagcagc tgcagatcga gatgaaggtg aagaccgggg 901 cggaaaacat gatccagtcg ctgggcatcg gatgcgacaa gaagctgctg gcggaagccc 961 accagatgct ggccgactcg aaggccaaga ttgagttttt gcgcctgcgc atcatcaagg 1021 tgaaacagaa ccgcgagcag gccgatcgcc tcaaggcctc gcgccagatg atcgacgagc 1081 atggccagac gatcggcggg aacaacagca gccagccgca gagcctggag acgacgctgg 1141 aggagcgaat cgaggagctc cgccatcgac tgcgaatcga ggcagccgtc gtcgatggag 1201 ccaagaatgt tatacgcacg ctgcagacgg cgaatagggc accggacaag aaggctttgc 1261 aggaggccca tggacgtttg tcggaatcgt cgcgaaaact agatctcttg cgctactcct 1321 tggatttacg acgccaggag ctgcccgccg attcgcccgc cgcccagcaa ttaaaaacgg 1381 agctgcagat cgtccagcta tcgacctccc cagctccggt cacctacacg tcactgcagt 1441 ccggacaagc gggcatactc ggcggaaagc cgtaccagtc ggtatcctcg cttggacgct 1501 gtgccagtgt caccggaaaa ctggaggttc gcttgctggg ctgtcaagat ttgctggaag 1561 atgtgcccgg tagatcgagg agggacaagg acaacaactc aagtccgggt gatttacgaa 1621 gcttcgtcaa gggcgtcacg tcgcgcagca gttcaaagag ctattcggta aaggatgaga 1681 cgtccattga gatcatggcg gtcatcaagc tggacaatat caccgttggc cagacatcgt 1741 ggaagcaatg ctcgcagcag gcctgggatc agcgcttctc catcgatcta gaccggtcgc 1801 gcgaactgga gattggagtt tactggcgcg actggcgatc cctgtgcgcc gtaaaggtgc 1861 tgcgccttga agagttcatc gacgatgtac gacatggcat ggcattgcag ctggagccac 1921 aaggtctgct atttgcggag gtcaagttct tgaaccccat gatttcacag aagccaaagc 1981 tgaggcgcca gcgtatgatc ttcaacaggc agcaagcgaa gaacatctcg cgggccaagc 2041 agatgaacat taatgtggcc acatggggcc gcctgcttaa gcggaatgct cctaaccatg 2101 tgcacatggg atcggcagga tcaggatctt ctctaaccgg tagctcgcct atggtggttg 2161 gtgggtctcg cgactctgag tctccgattt cgaggactcc ctcatccgac gcactggtgg 2221 aaccggagcc ctacacgccc ggagagcagg cacagaactt ggaattcgat cccgatgcag 2281 gaattaatga acacgtggag acgccaggtg aatacccgga tccggcggcc agtggtctga 2341 gcggaatgcg acccctgtcc atgcacatgc agggaattag tgtgctgccc ccggaatcgc 2401 cacccgtggc caccggagca gctggtcggc ccaatacgct cagcttacag atgccgggtg 2461 ccagtaaagg acaggtgatc caaggcggac ggactgcggc gcctacaacg gcgccaccgc 2521 caccacctgt gctcaaggcg acatccacca ctccgatatt ggatcaggag ctgcaggatg 2581 ccctgcacga attcgatttc ctgtcggacc tggactcacg tcccaccacg ctgcgtcgcc 2641 tgctgaagga gcagaagatg gcgctggatg ccggcgcgct ggagaatctg ctgctgcagc 2701 agcaacagac tgagcagcag gcactgcagc agcgccagcg ccaggagcag ctgcgtctgc 2761 agcagtttca ggaggcgcag cgccaggcga tcctggacct gtgcgtgaaa cagagagagc 2821 ccgcggagca gacatcaccc acccttgcca accaaacgcc gacgttccca ccgcttgcca 2881 gcaatcagat catgccaagc ttaaatgccc gcccttgcca aagccaaagc ccaaaccaca 2941 acgaatttca gttgcagccg cagccaccac atcccgccca gaaaccgacg aatcccgaac 3001 caccgtccgc tgtggaacag cagctgcacc gtccggtcct aatcctgccg cccgtggtgc 3061 tcctgggtgg tcgggaggag gaccgttcgg tgccaccatc gccactagtc gagtatcccg 3121 aggacgacga cgagtatctg tatcgtggta gcaacgaaaa cctgggcacc aggctgcact 3181 ccagccacag ttccagtgcc ggcgatcgtt tctgtgtgga ggttatacca cagttgggga 3241 agctttacgt gggcagtagc cagcagcagt atgcgcagca gtcatcgccc atcatccagg 3301 agccagctac tcctactatt tacggaaaca gcgccgcagc cggagcgccg cagttcccgc 3361 agcccgccca aaggcaagag aagcagcctc cgcagcagca gcccatctac gctaaccagt 3421 atgagctgaa tgtggccaag gcggcagctg cagcatctgt ttactcaccc agctcctcca 3481 ccaccagcaa ctccaatcaa cagcagcagc agcagcgccg gaatgtggcc cgtggactgc 3541 agtatcgtga atctggagga ctcgagactg gacgtgctgg caagcagcca cccaatgcgg 3601 gcatgttgtc aatggacaac ttccgtttgc taagcgttct tggtcgcggc cactttggca 3661 aggtgattct gtcccaattg cgaagcaaca accagtacta cgctattaag gcactgaaga 3721 agggagacat cattgcccgc gacgaagtgg agtccctgct tagcgaaaag cgcatcttcg 3781 aggtggccaa cgccatgcgc catccgttct tagttaactt gtattcgtgc ttccagactg 3841 agcaacacgt atgctttgtg atggaatacg ctgctggcgg agatttgatg atgcacatcc 3901 acacggacgt gttcctagag ccgagagccg ttttctacgc cgcttgtgtg gttctgggcc 3961 tgcagtacct gcacgagaac aagatcatct accgggacct gaagctggac aatttgcttt 4021 tggacacgga aggatatgtg aaaattgcgg actttggttt gtgcaaggag ggcatgggct 4081 ttggtgatcg cacgggcact ttctgtggta cgcccgagtt tctggcaccg gaagtgctca 4141 cggaaacttc ctacacacga gctgtggatt ggtggggctt gggtgtgttg atctttgaga 4201 tgttggttgg tgagtcccca ttccctggtg acgatgagga ggaagtattc gattcaattg 4261 tcaacgatga ggtgcgctat ccgcgcttcc tatcgctgga ggccatagcc gtgatgcgta 4321 ggcttttgcg caagaatcca gagagacgtc tgggatcttc ggaacgggat gcggaggatg 4381 ttaagaaaca ggcattcttc cggtcaattg tgtgggatga cctgctcctg cgaaaggtta 4441 aaccaccatt tgtgccgaca attaaccact tggaggatgt gtcaaacttt gacgaggagt 4501 tcacgtcgga gaaggctcag cttacgccac cgaaggagcc gcgacacttg accgaggagg 4561 agcagttgct cttccaggac ttttcataca cggccgaatg gtgttagaag ctcattctta 4621 gttcaaggat ttactaacgg gcctagcccg atccttatag cctatggcct gcttttgctt 4681 ttacttgtgt acgaaattgg tttcgagtaa ttttacttgg cttagtagtc gatgtgagtt 4741 caatatttat acatgaagac agcatgataa tacagataca ggacatatat atttataaac 4801 tatatctata tagaaaatac atctactaac gagagaaaaa aaaaaaaaaa aa //
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