LOCUS BC166997 1408 bp mRNA linear ROD 05-MAY-2008
DEFINITION Rattus norvegicus centromere protein A, mRNA (cDNA clone MGC:189150
IMAGE:8365241), complete cds.
ACCESSION BC166997
VERSION BC166997.1
KEYWORDS MGC.
SOURCE Rattus norvegicus (Norway rat)
ORGANISM Rattus norvegicus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Rattus.
REFERENCE 1 (bases 1 to 1408)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1408)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-MAY-2008) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Howard J. Jacob
cDNA Library Preparation: Express Genomics
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 341 Row: k Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi:
157821870.
FEATURES Location/Qualifiers
source 1..1408
/organism="Rattus norvegicus"
/mol_type="mRNA"
/db_xref="taxon:10116"
/clone="MGC:189150 IMAGE:8365241"
/tissue_type="Brain, 15 day embryo pool, mixed sex, strain
BN/NHsdMcwi"
/clone_lib="NIH_MGC_365"
/lab_host="DH10B"
/note="Vector: pExpress1"
gene 1..1408
/gene="Cenpa"
/gene_synonym="RGD1563607"
/db_xref="GeneID:298850"
/db_xref="RGD:1563607"
CDS 58..537
/gene="Cenpa"
/gene_synonym="RGD1563607"
/codon_start=1
/product="centromere protein A"
/protein_id="AAI66997.1"
/db_xref="GeneID:298850"
/db_xref="RGD:1563607"
/translation="MVGRRKPGTPRRRPSSPAPGPSQPATDSRRQSRTPTRRPSSPAP
GPSRRSSGVGPQALHRRRRFLWLKEIKNLQKSTDLLFRKKPFGLVVREICGKFSRGVD
LYWQAQALLALQEAAEAFLVHLFEDAYLLSLHAGRVTLFPKDVQLARRIRGIEGGLG"
ORIGIN
1 cgcaggaccc ggaaggctta ggaggagtcg gctgagcccg gaccctcgcg tccagccatg
61 gtcgggcgcc gcaagccagg gaccccgagg aggcgaccct ctagtccggc gcccggaccc
121 tctcagccag ccacggactc gcgtcgccag tcgaggactc cgacgaggcg gccctccagt
181 ccggcgcccg gaccctcgcg acggagctcc ggagtaggcc ctcaggcact acacagaaga
241 cggagattcc tgtggcttaa ggaaataaag aacctgcaaa agagcacaga cctcttgttt
301 aggaagaagc ctttcggcct cgtggtaaga gaaatatgtg ggaaattcag ccgtggtgtg
361 gatttatatt ggcaagctca ggccttgttg gcccttcaag aggcagcaga agcgtttctc
421 gttcacctct ttgaggacgc ctatctcctc tccttacatg ctggccgagt cacgcttttc
481 cccaaagatg tgcagctagc caggaggatc cgaggcattg agggaggact cggctgagct
541 gccagtgcga tgtgtccaga caatacctgg aatcttttgg agctgcagcc aaacagcagt
601 gtctgaggca ctgcctggat attgctggtt ttgagcagtg gctacacgat gccctttaag
661 attgtggctt ttgcctgtga cagaggaaga agaggccatc tgcctcgccc atggacacga
721 atgagtgttt gcagaccaaa ggtcaacttg gtttgtgaat tgctcaacca cattactgtt
781 tgcgggtttc agacccatga ggtctgccat gttatgaggg gtattgatat tttattcttc
841 ctgtaccatg tgcatctttt atcctgtgtc tttgtacttt ttaaatataa gggagaagtt
901 tttgagtaaa atgttagaat ctgttgtatg gaaagccctg gcagtcccgc ccgccataca
961 aatgtctgcc ttccagattg ccctcacgct gcctgtcagc aaacatggag cttttcaaaa
1021 cttaagtagc gttacataca cagtcttctc ttccttccct tcaaggctgg gacttgaatc
1081 caatgtctta tacatgccaa acatggactg taatgttgaa ctgcatccac agcctgaaat
1141 atatagtctt tctggttcct accagtaaat tcctatggaa accatccaga aagtctctct
1201 tagaagtaga cagtttatcc ttagctgtaa atcacataca atgtatcata ccagttttgg
1261 gattttacaa catgttttcc gtatttttta caggttatct ttagtttatt tgaggagaaa
1321 taataaaaaa ataatttctt agtgagaaaa attgaaataa agttactgtt acagatgtta
1381 taaaaaaaaa aaaaaaaaaa aaaaaaaa
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