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Rattus norvegicus PERP, TP53 apoptosis effector, mRNA (cDNA clone MGC:188392 IMAGE:5599021), complete cds

GenBank: BC166608.1

FASTA Graphics 

LOCUS       BC166608                1890 bp    mRNA    linear   ROD 10-JUN-2008
DEFINITION  Rattus norvegicus PERP, TP53 apoptosis effector, mRNA (cDNA clone
            MGC:188392 IMAGE:5599021), complete cds.
ACCESSION   BC166608
VERSION     BC166608.1
KEYWORDS    MGC.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1890)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1890)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-APR-2008) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Jeff Green/Paturu Kondaiah, NCI.
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 337 Row: a Column: 14
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi:
            157820212.
FEATURES             Location/Qualifiers
     source          1..1890
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /clone="MGC:188392 IMAGE:5599021"
                     /tissue_type="Prostate, pool of NCI_CGAP_Pr30, 40, 41 and
                     NCI_CGAP_Pr29, 39, 42"
                     /clone_lib="NCI_CGAP_Pr50"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6.1"
     gene            1..1890
                     /gene="Perp"
                     /db_xref="GeneID:292949"
                     /db_xref="RGD:1310294"
     CDS             105..686
                     /gene="Perp"
                     /codon_start=1
                     /product="PERP, TP53 apoptosis effector"
                     /protein_id="AAI66608.1"
                     /db_xref="GeneID:292949"
                     /db_xref="RGD:1310294"
                     /translation="MLRCGLACERCRWILPLLLLSAIAFDIIALSGRGWLQSSNHIQT
                     SSLWWRCFDEGGGSGSYDDGCQSLMEYAWGRAAAATLFCGFIILVICFILSFFALCGP
                     QMLVFLRVIGGLLALAAVFQIISLVIYPVKYTQTFRLHDNPAVNYIYNWAYGFGWAAT
                     IILIGCSFFFCCLPNYEDDLLGNAKPRYFYTSA"
ORIGIN      
        1 gcgggagccg cctcttcctt tagtggcggt gtcggcgctc gcaggaccac tctcggccgc
       61 tgctccagcc ccgcgttcct ccgctccgcg ccgccaccga cgacatgctg cgctgcggcc
      121 tggcctgcga gcgctgcagg tggatcctgc ccctgctgct gctcagtgcc atcgccttcg
      181 acatcatcgc gctgtccggc cgcggctggc tgcagtctag caaccacatc cagacgtcct
      241 cgctttggtg gaggtgtttc gacgagggcg gtggcagcgg ctcctacgac gatggctgcc
      301 agagcctcat ggaatacgcc tggggccgag cagctgctgc cactctcttc tgtggattca
      361 tcatcctggt catctgcttc atcctctcgt tcttcgccct gtgtggaccc cagatgcttg
      421 ttttcctgag agtgattgga ggccttctcg cactggctgc tgtattccag atcatctccc
      481 tggttatcta tcccgtgaag tacacacaaa ccttcaggct tcatgataat cccgctgtta
      541 attacatcta caactgggcc tatggcttcg gatgggcagc cacgatcatc ttgattggtt
      601 gctctttctt cttctgctgc ctccccaact acgaggatga ccttctgggc aatgcaaagc
      661 ccaggtactt ctatacatct gcctaatgtg gagggagatc ctgagaaaag cctgctgcaa
      721 gatgcatgtg aggaggaaag tgttctccaa ggagcaaaga acctatgttt gggcagtgtt
      781 catatgagtg gaaatgctag aataaatgct aaagaaaatt cttcataaat agtgttaagt
      841 ttcatgtccc tgtgtatgtc ttgcggagtt aaaagagact tgtttctgtt tgctcagtat
      901 atgctgactt ctccttgcac caattctgta tcatttaaac ttcatttgtt aaagagcatg
      961 cccgggaaac ttgctaagta agaaatgcta tggcttctca tttaataatc tgatgaagct
     1021 tttgtttttc cagagagaat gggttgtttc tacagggaat gggttggcta cagagcagga
     1081 aagctactgg caaattccag tgaccaaata ttctgaaatt aatgtttttc ttaaacacac
     1141 acacacacac acacacacac acacacacac acacacacac acgccctttt tgagttttca
     1201 gttacataaa gaagcagagt ggtgtcctac gtgagcatcg atgttttgaa cagttattgt
     1261 ttcgctcagc tttgtgttga ttttctccga tatgcgggga aagtgaaaca tggccgttgt
     1321 cactactgaa tgctaaggtg aattttactc ttttgacgta gattagaggg gtgggtgtgg
     1381 gaagaagcca tattaacaaa tctgtacagt gttgcgtgta tgtttagaac cagcgtagac
     1441 tagatgggag ggtggactag gccttattcc tcccgaccga tggatgtgat gaggtcgggt
     1501 aggaaggcct atgagggtta ccattcagac atcccgggag aagacatatc aatgcccctc
     1561 tcagccttaa ctgagctcta ctgacagaca gctagaatag atttgaactg taacagaaac
     1621 ctaaatgtaa ttacaaacct ggtcttcctc ggtaaacaga cttaacatat ctgtataata
     1681 catacaaggg ggaaatttgg gaatgagttt ctctgaatac atattggaag ggctgttatt
     1741 attttttctt accatttata ctcactgaat ggaaactagc ttattttaaa tatcagaaca
     1801 ctattttgta agttgcagcc aagacaattg cagttttcat gaccagcttc cccaataaac
     1861 cagatgttca aaaaaaaaaa aaaaaaaaaa
//
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Reference sequence information

  • RefSeq mRNA
    See reference mRNA sequence for the Perp gene (NM_001106265.2).

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