LOCUS BC166608 1890 bp mRNA linear ROD 10-JUN-2008
DEFINITION Rattus norvegicus PERP, TP53 apoptosis effector, mRNA (cDNA clone
MGC:188392 IMAGE:5599021), complete cds.
ACCESSION BC166608
VERSION BC166608.1
KEYWORDS MGC.
SOURCE Rattus norvegicus (Norway rat)
ORGANISM Rattus norvegicus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Rattus.
REFERENCE 1 (bases 1 to 1890)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1890)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-APR-2008) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Jeff Green/Paturu Kondaiah, NCI.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 337 Row: a Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi:
157820212.
FEATURES Location/Qualifiers
source 1..1890
/organism="Rattus norvegicus"
/mol_type="mRNA"
/db_xref="taxon:10116"
/clone="MGC:188392 IMAGE:5599021"
/tissue_type="Prostate, pool of NCI_CGAP_Pr30, 40, 41 and
NCI_CGAP_Pr29, 39, 42"
/clone_lib="NCI_CGAP_Pr50"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6.1"
gene 1..1890
/gene="Perp"
/db_xref="GeneID:292949"
/db_xref="RGD:1310294"
CDS 105..686
/gene="Perp"
/codon_start=1
/product="PERP, TP53 apoptosis effector"
/protein_id="AAI66608.1"
/db_xref="GeneID:292949"
/db_xref="RGD:1310294"
/translation="MLRCGLACERCRWILPLLLLSAIAFDIIALSGRGWLQSSNHIQT
SSLWWRCFDEGGGSGSYDDGCQSLMEYAWGRAAAATLFCGFIILVICFILSFFALCGP
QMLVFLRVIGGLLALAAVFQIISLVIYPVKYTQTFRLHDNPAVNYIYNWAYGFGWAAT
IILIGCSFFFCCLPNYEDDLLGNAKPRYFYTSA"
ORIGIN
1 gcgggagccg cctcttcctt tagtggcggt gtcggcgctc gcaggaccac tctcggccgc
61 tgctccagcc ccgcgttcct ccgctccgcg ccgccaccga cgacatgctg cgctgcggcc
121 tggcctgcga gcgctgcagg tggatcctgc ccctgctgct gctcagtgcc atcgccttcg
181 acatcatcgc gctgtccggc cgcggctggc tgcagtctag caaccacatc cagacgtcct
241 cgctttggtg gaggtgtttc gacgagggcg gtggcagcgg ctcctacgac gatggctgcc
301 agagcctcat ggaatacgcc tggggccgag cagctgctgc cactctcttc tgtggattca
361 tcatcctggt catctgcttc atcctctcgt tcttcgccct gtgtggaccc cagatgcttg
421 ttttcctgag agtgattgga ggccttctcg cactggctgc tgtattccag atcatctccc
481 tggttatcta tcccgtgaag tacacacaaa ccttcaggct tcatgataat cccgctgtta
541 attacatcta caactgggcc tatggcttcg gatgggcagc cacgatcatc ttgattggtt
601 gctctttctt cttctgctgc ctccccaact acgaggatga ccttctgggc aatgcaaagc
661 ccaggtactt ctatacatct gcctaatgtg gagggagatc ctgagaaaag cctgctgcaa
721 gatgcatgtg aggaggaaag tgttctccaa ggagcaaaga acctatgttt gggcagtgtt
781 catatgagtg gaaatgctag aataaatgct aaagaaaatt cttcataaat agtgttaagt
841 ttcatgtccc tgtgtatgtc ttgcggagtt aaaagagact tgtttctgtt tgctcagtat
901 atgctgactt ctccttgcac caattctgta tcatttaaac ttcatttgtt aaagagcatg
961 cccgggaaac ttgctaagta agaaatgcta tggcttctca tttaataatc tgatgaagct
1021 tttgtttttc cagagagaat gggttgtttc tacagggaat gggttggcta cagagcagga
1081 aagctactgg caaattccag tgaccaaata ttctgaaatt aatgtttttc ttaaacacac
1141 acacacacac acacacacac acacacacac acacacacac acgccctttt tgagttttca
1201 gttacataaa gaagcagagt ggtgtcctac gtgagcatcg atgttttgaa cagttattgt
1261 ttcgctcagc tttgtgttga ttttctccga tatgcgggga aagtgaaaca tggccgttgt
1321 cactactgaa tgctaaggtg aattttactc ttttgacgta gattagaggg gtgggtgtgg
1381 gaagaagcca tattaacaaa tctgtacagt gttgcgtgta tgtttagaac cagcgtagac
1441 tagatgggag ggtggactag gccttattcc tcccgaccga tggatgtgat gaggtcgggt
1501 aggaaggcct atgagggtta ccattcagac atcccgggag aagacatatc aatgcccctc
1561 tcagccttaa ctgagctcta ctgacagaca gctagaatag atttgaactg taacagaaac
1621 ctaaatgtaa ttacaaacct ggtcttcctc ggtaaacaga cttaacatat ctgtataata
1681 catacaaggg ggaaatttgg gaatgagttt ctctgaatac atattggaag ggctgttatt
1741 attttttctt accatttata ctcactgaat ggaaactagc ttattttaaa tatcagaaca
1801 ctattttgta agttgcagcc aagacaattg cagttttcat gaccagcttc cccaataaac
1861 cagatgttca aaaaaaaaaa aaaaaaaaaa
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