LOCUS BC132529 1801 bp mRNA linear ROD 06-DEC-2007
DEFINITION Mus musculus solute carrier family 10 (sodium/bile acid
cotransporter family), member 4, mRNA (cDNA clone MGC:164160
IMAGE:40130806), complete cds.
ACCESSION BC132529
VERSION BC132529.1
KEYWORDS MGC.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 1801)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1801)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JAN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Ambion
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCK Plate: 6 Row: K Column: 7.
FEATURES Location/Qualifiers
source 1..1801
/organism="Mus musculus"
/mol_type="mRNA"
/db_xref="taxon:10090"
/clone="MGC:164160 IMAGE:40130806"
/tissue_type="Brain, PCR rescued clones"
/clone_lib="NIH_MGC_378"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: TCCGTCGC"
gene 1..1801
/gene="Slc10a4"
/gene_synonym="E130304D01"
/db_xref="GeneID:231290"
/db_xref="MGI:MGI:3606480"
CDS 76..1389
/gene="Slc10a4"
/gene_synonym="E130304D01"
/codon_start=1
/product="solute carrier family 10 (sodium/bile acid
cotransporter family), member 4"
/protein_id="AAI32530.1"
/db_xref="GeneID:231290"
/db_xref="MGI:MGI:3606480"
/translation="MDSLDNTTLLLAPSSLLPDNLTLSPNAGSPSASTLSPLAVTSSP
GPGLSLAPSPSIGFSPEATPTPEPTSSSLTVGVAGQGSSAFPRPWIPHEPPFWDTPLN
HGLNVFVGAALCITMLGLGCTVDVNHFGAHVRRPVGALLAALCQFGFLPLLAFLLALI
FKLDEVAAVAVLLCGCCPGGNLSNLMSLLVDGDMNLSIIMTISSTLLALVLMPLCLWI
YSRAWINTPLVQLLPLGAVTLTLCSTLIPIGLGVFIRYKYNRVADYIVKVSLWSLLVT
LVVLFIMTGTMLGPELLASIPATVYVVAIFMPLAGYASGYGLATLFHLPPNCKRTVCL
ETGSQNVQLCTAILKLAFPPRFIGSMYMFPLLYALFQSAEAGVFVLIYKMYGSEILHK
REALDEDEDTDISYKKLKEEEMADTSYGTVGTDDLVMMETTQTAL"
ORIGIN
1 aaaagggacc acaggaccga gggaggaggt gtggccaggg acagcccctg cagaccgtgc
61 ctcggcgaca gagccatgga cagcctggac aacaccaccc tgctccttgc cccgtcctcg
121 ctgctgcctg acaacctcac cctgtctccc aacgccggca gcccgagcgc cagcaccctt
181 tcgcctctcg ctgtcacctc tagtcccggt ccggggctca gcctcgctcc aagtccaagc
241 atcggcttta gccccgaggc aaccccgact ccagagccca cgagcagcag cctcacggtc
301 ggcgtggctg gccagggctc ctccgctttc ccccggccct ggatccccca cgagccccca
361 ttctgggaca cgccgctcaa ccacgggctg aatgtgtttg tgggcgccgc cttgtgcatc
421 accatgctgg gtctaggctg taccgtggac gtgaaccact tcggggcgca cgtccggcgg
481 cccgtgggcg ctctgctggc tgcgctctgc cagttcggct tcttgccgct gctagccttc
541 ttgctggccc tcatcttcaa gctggatgag gtggccgcgg tggctgtact cctatgtggc
601 tgctgtcctg gtggaaatct ctccaatctc atgtccctgc tggtagacgg cgacatgaac
661 ctcagcatca tcatgaccat ttcctccaca ctcctggccc tggtgttgat gcccctctgc
721 ctctggatct acagccgtgc ctggatcaat acccctctgg tgcaattgct ccccctaggg
781 gcagtcaccc tgactctctg cagcactctc attcctattg ggctaggcgt cttcattcgc
841 tacaaataca accgcgtggc tgactacatc gtgaaggttt ccctgtggtc tctgcttgtg
901 accctggtgg ttcttttcat aatgactggc accatgctgg gacctgaact gctggcaagc
961 attcccgcaa ctgtttacgt ggtcgccatt tttatgcctc tggcgggcta cgcctcgggt
1021 tatggcttag ctaccctctt ccacctcccg cccaactgca agcggactgt gtgtctggaa
1081 acaggaagtc agaacgtgca gctctgcact gcgattctca aactggcctt cccgcctcgc
1141 tttataggta gcatgtacat gttccctctg ctctacgccc tcttccagtc tgccgaggca
1201 ggggtcttcg tgttgatcta caaaatgtac ggaagtgaga tactgcacaa gcgagaggcc
1261 ctagacgaag acgaagacac cgatatttct tataagaaac tgaaagaaga ggaaatggca
1321 gacacctcct atggcaccgt ggggacggat gacttagtga tgatggagac cacccagacc
1381 gccctctgac cgaggagata cacgggagct gaaacatcac ttcctatttg tgaccattgg
1441 tagcgagtat ggttcgcatc cgggataaag atgggttgac atttcctgta acagatttgc
1501 tcttcccact gtaatgttgt atctcagtat tacccatgtg tttttctaac tcaacagagt
1561 cccagtattg cttacacctg gatcagctaa agtgccggtc ctctgcttaa gtagtgtgct
1621 gtttgtttgt ttgttttttg ttttgttttg ttttcccggt ttttgtttgt tttgccattt
1681 ccaccagcat cgctacagat aggaaatggg gttggaaatg tttgtaaatg tttgtaaaac
1741 agaaccatgg gtttgctcaa cttacaaaca accgattctg ttcagggcga gcctgtattg
1801 a
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