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Mus musculus solute carrier family 10 (sodium/bile acid cotransporter family), member 4, mRNA (cDNA clone MGC:164160 IMAGE:40130806), complete cds

GenBank: BC132529.1

FASTA Graphics 

LOCUS       BC132529                1801 bp    mRNA    linear   ROD 06-DEC-2007
DEFINITION  Mus musculus solute carrier family 10 (sodium/bile acid
            cotransporter family), member 4, mRNA (cDNA clone MGC:164160
            IMAGE:40130806), complete cds.
ACCESSION   BC132529
VERSION     BC132529.1
KEYWORDS    MGC.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1801)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1801)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (31-JAN-2007) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Ambion
            cDNA Library Preparation: British Columbia Cancer Research Center
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Genome Sequence Centre,
            BC Cancer Agency, Vancouver, BC, Canada
            info@bcgsc.bc.ca
            Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
            Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
            Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
            Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
            Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
            Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
            Kim MacDonald,  Mike R. Mayo, Josh Moran, Diana Palmquist, JR
            Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
            Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRCK Plate: 6 Row: K Column: 7.
FEATURES             Location/Qualifiers
     source          1..1801
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /clone="MGC:164160 IMAGE:40130806"
                     /tissue_type="Brain, PCR rescued clones"
                     /clone_lib="NIH_MGC_378"
                     /lab_host="DH10B"
                     /note="Vector: pCR4-TOPO with reversed insert; Clone
                     identification sequence tag: TCCGTCGC"
     gene            1..1801
                     /gene="Slc10a4"
                     /gene_synonym="E130304D01"
                     /db_xref="GeneID:231290"
                     /db_xref="MGI:MGI:3606480"
     CDS             76..1389
                     /gene="Slc10a4"
                     /gene_synonym="E130304D01"
                     /codon_start=1
                     /product="solute carrier family 10 (sodium/bile acid
                     cotransporter family), member 4"
                     /protein_id="AAI32530.1"
                     /db_xref="GeneID:231290"
                     /db_xref="MGI:MGI:3606480"
                     /translation="MDSLDNTTLLLAPSSLLPDNLTLSPNAGSPSASTLSPLAVTSSP
                     GPGLSLAPSPSIGFSPEATPTPEPTSSSLTVGVAGQGSSAFPRPWIPHEPPFWDTPLN
                     HGLNVFVGAALCITMLGLGCTVDVNHFGAHVRRPVGALLAALCQFGFLPLLAFLLALI
                     FKLDEVAAVAVLLCGCCPGGNLSNLMSLLVDGDMNLSIIMTISSTLLALVLMPLCLWI
                     YSRAWINTPLVQLLPLGAVTLTLCSTLIPIGLGVFIRYKYNRVADYIVKVSLWSLLVT
                     LVVLFIMTGTMLGPELLASIPATVYVVAIFMPLAGYASGYGLATLFHLPPNCKRTVCL
                     ETGSQNVQLCTAILKLAFPPRFIGSMYMFPLLYALFQSAEAGVFVLIYKMYGSEILHK
                     REALDEDEDTDISYKKLKEEEMADTSYGTVGTDDLVMMETTQTAL"
ORIGIN      
        1 aaaagggacc acaggaccga gggaggaggt gtggccaggg acagcccctg cagaccgtgc
       61 ctcggcgaca gagccatgga cagcctggac aacaccaccc tgctccttgc cccgtcctcg
      121 ctgctgcctg acaacctcac cctgtctccc aacgccggca gcccgagcgc cagcaccctt
      181 tcgcctctcg ctgtcacctc tagtcccggt ccggggctca gcctcgctcc aagtccaagc
      241 atcggcttta gccccgaggc aaccccgact ccagagccca cgagcagcag cctcacggtc
      301 ggcgtggctg gccagggctc ctccgctttc ccccggccct ggatccccca cgagccccca
      361 ttctgggaca cgccgctcaa ccacgggctg aatgtgtttg tgggcgccgc cttgtgcatc
      421 accatgctgg gtctaggctg taccgtggac gtgaaccact tcggggcgca cgtccggcgg
      481 cccgtgggcg ctctgctggc tgcgctctgc cagttcggct tcttgccgct gctagccttc
      541 ttgctggccc tcatcttcaa gctggatgag gtggccgcgg tggctgtact cctatgtggc
      601 tgctgtcctg gtggaaatct ctccaatctc atgtccctgc tggtagacgg cgacatgaac
      661 ctcagcatca tcatgaccat ttcctccaca ctcctggccc tggtgttgat gcccctctgc
      721 ctctggatct acagccgtgc ctggatcaat acccctctgg tgcaattgct ccccctaggg
      781 gcagtcaccc tgactctctg cagcactctc attcctattg ggctaggcgt cttcattcgc
      841 tacaaataca accgcgtggc tgactacatc gtgaaggttt ccctgtggtc tctgcttgtg
      901 accctggtgg ttcttttcat aatgactggc accatgctgg gacctgaact gctggcaagc
      961 attcccgcaa ctgtttacgt ggtcgccatt tttatgcctc tggcgggcta cgcctcgggt
     1021 tatggcttag ctaccctctt ccacctcccg cccaactgca agcggactgt gtgtctggaa
     1081 acaggaagtc agaacgtgca gctctgcact gcgattctca aactggcctt cccgcctcgc
     1141 tttataggta gcatgtacat gttccctctg ctctacgccc tcttccagtc tgccgaggca
     1201 ggggtcttcg tgttgatcta caaaatgtac ggaagtgaga tactgcacaa gcgagaggcc
     1261 ctagacgaag acgaagacac cgatatttct tataagaaac tgaaagaaga ggaaatggca
     1321 gacacctcct atggcaccgt ggggacggat gacttagtga tgatggagac cacccagacc
     1381 gccctctgac cgaggagata cacgggagct gaaacatcac ttcctatttg tgaccattgg
     1441 tagcgagtat ggttcgcatc cgggataaag atgggttgac atttcctgta acagatttgc
     1501 tcttcccact gtaatgttgt atctcagtat tacccatgtg tttttctaac tcaacagagt
     1561 cccagtattg cttacacctg gatcagctaa agtgccggtc ctctgcttaa gtagtgtgct
     1621 gtttgtttgt ttgttttttg ttttgttttg ttttcccggt ttttgtttgt tttgccattt
     1681 ccaccagcat cgctacagat aggaaatggg gttggaaatg tttgtaaatg tttgtaaaac
     1741 agaaccatgg gtttgctcaa cttacaaaca accgattctg ttcagggcga gcctgtattg
     1801 a
//
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Reference sequence information

  • RefSeq mRNA
    See reference mRNA sequence for the Slc10a4 gene (NM_173403.2).

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