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Danio rerio zgc:110848, mRNA (cDNA clone MGC:110848 IMAGE:7156048), complete cds

GenBank: BC090793.1

FASTA Graphics 

LOCUS       BC090793                1055 bp    mRNA    linear   VRT 15-JUL-2006
DEFINITION  Danio rerio zgc:110848, mRNA (cDNA clone MGC:110848 IMAGE:7156048),
            complete cds.
ACCESSION   BC090793
VERSION     BC090793.1
KEYWORDS    MGC.
SOURCE      Danio rerio (zebrafish)
  ORGANISM  Danio rerio
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
            Cypriniformes; Danionidae; Danioninae; Danio.
REFERENCE   1  (bases 1 to 1055)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1055)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (28-FEB-2005) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Genome Institute of Singapore
            cDNA Library Preparation: S. Mathavan, Chia-Lin Wei, and Yijun
            Ruan, Genome Institute of Singapore
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: National Institutes of Health Intramural
            Sequencing Center (NISC),
            Gaithersburg, Maryland;
            Web site: http://www.nisc.nih.gov/
            Contact: nisc_mgc@nhgri.nih.gov
            Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
            Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
            Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
            Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
            Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
            McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
            Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
            Young,A., Zhang,L.-H. and Green,E.D.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 66 Row: p Column: 23
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 60416108.
FEATURES             Location/Qualifiers
     source          1..1055
                     /organism="Danio rerio"
                     /mol_type="mRNA"
                     /strain="Singapore local strain"
                     /db_xref="taxon:7955"
                     /clone="MGC:110848 IMAGE:7156048"
                     /tissue_type="Embryo, 7 different stages (from just
                     fertilized embryos to 72 hours just hatched baby fish)"
                     /clone_lib="GISZF001_ra"
                     /lab_host="DH10B"
                     /note="Vector: pDNR-LIB"
     gene            1..1055
                     /gene="zgc:110848"
                     /db_xref="GeneID:503751"
                     /db_xref="ZFIN:ZDB-GENE-050306-32"
     CDS             12..698
                     /gene="zgc:110848"
                     /codon_start=1
                     /product="zgc:110848"
                     /protein_id="AAH90793.1"
                     /db_xref="GeneID:503751"
                     /db_xref="ZFIN:ZDB-GENE-050306-32"
                     /translation="MAAVKLQKSVVSQAGKHTASVIFLHGSGDTGPGLRSWVLDVLGQ
                     NLAFENIRVIYPTASLRPYTPMRGAPSHVWFDRHKISQHCPEHLESIDSMCDHLGDIV
                     QDELRAGIPKHRMVIGGFPMGGAMALHLVCRHHQDIAGIFCLSSFLNKDSAVYQAVEN
                     AQRPLPELLQCHGTSDELVFHDWGEKTNTLLKKAGLNASFHSFPDLNHQLCRQELELL
                     RSWILKKLSI"
ORIGIN      
        1 gggggataaa catggctgcg gttaaactcc agaagagtgt tgtgagccag gctgggaaac
       61 acacagcttc tgttatcttt cttcacggct caggagacac agggccaggc ctgcgcagct
      121 gggttttgga tgttttagga caaaacttgg catttgaaaa catccgggtg atttatccca
      181 cagcctcact caggccgtac acacccatgc gaggggcgcc gtctcatgtg tggtttgatc
      241 gtcacaagat ttctcagcat tgccccgagc acttggagtc gatagattcc atgtgtgatc
      301 atttaggtga cattgtgcag gatgagctcc gagccgggat cccaaaacac aggatggtta
      361 ttggtggttt ccccatgggt ggagccatgg cgcttcatct ggtctgcagg caccatcagg
      421 acattgctgg catcttctgt ctgtccagct tccttaacaa agactcagcg gtatatcagg
      481 cagtagaaaa tgcacagcgc cccctacctg agctcctgca gtgtcacggc acatcagacg
      541 agctggtttt ccatgactgg ggcgagaaga cgaacacgct actgaaaaaa gctggactca
      601 atgcatcttt ccattccttc ccagacctca accatcagtt gtgtcgacaa gaactggagt
      661 tgcttcgctc ctggatcctg aagaagcttt ccatttaaag agtccttaat tctagacaat
      721 gaccactgaa ccaccgtgcc accttcatgg agcttttgat ccatttaaaa aaaagtctca
      781 gtcacatttg catggtttaa aacaaaatgt ccacatgaaa atgcaaaaag gccccatgaa
      841 gtgctgtcaa ggtcatgcca aagcaacaga tggcgctata ctcctaaccg taaagtcacg
      901 ttggccaatc aaaagataga tattatatat atttttgatt tcggttggct gtcaacatga
      961 cgtatgtctg tttggagttc gggaaatcgc tgcacataat ctgatgtcat acaaaataaa
     1021 tgaaggtaca accagaccaa aaaaaaaaaa aaaaa
//
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