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Homo sapiens X-ray repair complementing defective repair in Chinese hamster cells 6, mRNA (cDNA clone MGC:87834 IMAGE:6167735), complete cds

GenBank: BC072449.1

FASTA Graphics 

LOCUS       BC072449                2091 bp    mRNA    linear   PRI 04-AUG-2008
DEFINITION  Homo sapiens X-ray repair complementing defective repair in Chinese
            hamster cells 6, mRNA (cDNA clone MGC:87834 IMAGE:6167735),
            complete cds.
ACCESSION   BC072449
VERSION     BC072449.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2091)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2091)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (01-JUN-2004) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC/DCTD/DTP
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: National Institutes of Health Intramural
            Sequencing Center (NISC),
            Gaithersburg, Maryland;
            Web site: http://www.nisc.nih.gov/
            Contact: nisc_mgc@nhgri.nih.gov
            Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
            Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
            Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
            Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
            Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
            McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
            Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
            Young,A., Zhang,L.-H. and Green,E.D.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 174 Row: k Column: 16
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 51093847.
FEATURES             Location/Qualifiers
     source          1..2091
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:87834 IMAGE:6167735"
                     /tissue_type="Skin, melanotic melanoma."
                     /clone_lib="NIH_MGC_72"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            1..2091
                     /gene="XRCC6"
                     /gene_synonym="CTC75"
                     /gene_synonym="CTCBF"
                     /gene_synonym="KU70"
                     /gene_synonym="ML8"
                     /gene_synonym="TLAA"
                     /db_xref="GeneID:2547"
                     /db_xref="HGNC:HGNC:4055"
                     /db_xref="MIM:152690"
     CDS             23..1852
                     /gene="XRCC6"
                     /gene_synonym="CTC75"
                     /gene_synonym="CTCBF"
                     /gene_synonym="KU70"
                     /gene_synonym="ML8"
                     /gene_synonym="TLAA"
                     /codon_start=1
                     /product="X-ray repair complementing defective repair in
                     Chinese hamster cells 6"
                     /protein_id="AAH72449.1"
                     /db_xref="GeneID:2547"
                     /db_xref="HGNC:HGNC:4055"
                     /db_xref="MIM:152690"
                     /translation="MSGWESYYKTEGDEEAEEEQEENLEASGDYKYSGRDSLIFLVDA
                     SKAMFESQSEDELTPFDMSIQCIQSVYISKIISSDRDLLAVVFYGTEKDKNSVNFKNI
                     YVLQELDNPGAKRILELDQFKGQQGQKRFQDMMGHGSDYSLSEVLWVCANLFSDVQFK
                     MSHKRIMLFTNEDNPHGNDSAKASRARTKAGDLRDTGIFLDLMHLKKPGGFDISLFYR
                     DIISIAEDEDLRVHFEESSKLEDLLRKVRAKETRKRALSRLKLKLNKDIVISVGIYNL
                     VQKALKPPPIKLYRETNEPVKTKTRTFNTSTGGLLLPSDTKRSQIYGSRQIILEKEET
                     EELKRFDDPGLMLMGFKPLVLLKKHHYLRPSLFVYPEESLVIGSSTLFSALLIKCLEK
                     EVAALCRYTPRRNIPPYFVALVPQEEELDDQKIQVTPPGFQLVFLPFADDKRKMPFTE
                     KIMATPEQVGKMKAIVEKLRFTYRSDSFENPVLQQHFRNLEALALDLMEPEQAVDLTL
                     PKVEAMNKRLGSLVDEFKELVYPPDYNPEGKVTKRKHDNEGSGSKRPKVEYSEEELKT
                     HISKGTLGKFTVPMLKEACRAYGLKSGLKKQELLEALTKHFQD"
ORIGIN      
        1 gccaaagtga gcagtagcca acatgtcagg gtgggagtca tattacaaaa ccgagggcga
       61 tgaagaagca gaggaagaac aagaagagaa ccttgaagca agtggagact ataaatattc
      121 aggaagagat agtttgattt ttttggttga tgcctccaag gctatgtttg aatctcagag
      181 tgaagatgag ttgacacctt ttgacatgag catccagtgt atccaaagtg tgtacatcag
      241 taagatcata agcagtgatc gagatctctt ggctgtggtg ttctatggta ccgagaaaga
      301 caaaaattca gtgaatttta aaaatattta cgtcttacag gagctggata atccaggtgc
      361 aaaacgaatt ctagagcttg accagtttaa ggggcagcag ggacaaaaac gtttccaaga
      421 catgatgggc cacggatctg actactcact cagtgaagtg ctgtgggtct gtgccaacct
      481 ctttagtgat gtccaattca agatgagtca taagaggatc atgctgttca ccaatgaaga
      541 caacccccat ggcaatgaca gtgccaaagc cagccgggcc aggaccaaag ccggtgatct
      601 ccgagataca ggcatcttcc ttgacttgat gcacctgaag aaacctgggg gctttgacat
      661 atccttgttc tacagagata tcatcagcat agcagaggat gaggacctca gggttcactt
      721 tgaggaatcc agcaagctag aagacctgtt gcggaaggtt cgcgccaagg agaccaggaa
      781 gcgagcactc agcaggttaa agctgaagct caacaaagat atagtgatct ctgtgggcat
      841 ttataatctg gtccagaagg ctctcaagcc tcctccaata aagctctatc gggaaacaaa
      901 tgaaccagtg aaaaccaaga cccggacctt taatacaagt acaggcggtt tgcttctgcc
      961 tagcgatacc aagaggtctc agatctatgg gagtcgtcag attatactgg agaaagagga
     1021 aacagaagag ctaaaacggt ttgatgatcc aggtttgatg ctcatgggtt tcaagccgtt
     1081 ggtactgctg aagaaacacc attacctgag gccctccctg ttcgtgtacc cagaggagtc
     1141 gctggtgatt gggagctcaa ccctgttcag tgctctgctc atcaagtgtc tggagaagga
     1201 ggttgcagca ttgtgcagat acacaccccg caggaacatc cctccttatt ttgtggcttt
     1261 ggtgccacag gaagaagagt tggatgacca gaaaattcag gtgactcctc caggcttcca
     1321 gctggtcttt ttaccctttg ctgatgataa aaggaagatg ccctttactg aaaaaatcat
     1381 ggcaactcca gagcaggtgg gcaagatgaa ggctatcgtt gagaagcttc gcttcacata
     1441 cagaagtgac agctttgaga accccgtgct gcagcagcac ttcaggaacc tggaggcctt
     1501 ggccttggat ttgatggagc cggaacaagc agtggacctg acattgccca aggttgaagc
     1561 aatgaataaa agactgggct ccttggtgga tgagtttaag gagcttgttt acccaccaga
     1621 ttacaatcct gaagggaaag ttaccaagag aaaacacgat aatgaaggtt ctggaagcaa
     1681 aaggcccaag gtggagtatt cagaagagga gctgaagacc cacatcagca agggtacgct
     1741 gggcaagttc actgtgccca tgctgaaaga ggcctgccgg gcttacgggc tgaagagtgg
     1801 tctgaagaag caggagctgc tggaagccct caccaagcac ttccaggact gaccagaggc
     1861 cgcgcgtcca gctgcccttc cgcagtgtgg ccaggctgcc tggccttgtc ctcagccagt
     1921 taaaatgtgt ttctcctgag ctaggaagag tctacccgac ataagtcgag ggactttatg
     1981 tttttgaggc tttctgttgc catggtgatg gtgtagccct cccactttgc tgttccttac
     2041 tttactgcct gaataaagag ccctaagttt gtactaaaaa aaaaaaaaaa a
//
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