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Danio rerio suppressor of fused homolog (Drosophila), mRNA (cDNA clone MGC:55464 IMAGE:2640032), complete cds

GenBank: BC045348.1

FASTA Graphics 

LOCUS       BC045348                2764 bp    mRNA    linear   VRT 17-DEC-2007
DEFINITION  Danio rerio suppressor of fused homolog (Drosophila), mRNA (cDNA
            clone MGC:55464 IMAGE:2640032), complete cds.
ACCESSION   BC045348
VERSION     BC045348.1
KEYWORDS    MGC.
SOURCE      Danio rerio (zebrafish)
  ORGANISM  Danio rerio
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
            Cypriniformes; Danionidae; Danioninae; Danio.
REFERENCE   1  (bases 1 to 2764)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2764)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (31-JAN-2003) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Dr. Sumio Sugano and Dr. Ko-ichi Kawakami
            cDNA Library Preparation: Dr. Sumio Sugano and Dr. Ko-ichi Kawakami
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Institute for Systems Biology
            http://www.systemsbiology.org
            contact: amadan@systemsbiology.org
            Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
            Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 101 Row: j Column: 24
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 28278854.
FEATURES             Location/Qualifiers
     source          1..2764
                     /organism="Danio rerio"
                     /mol_type="mRNA"
                     /strain="AB"
                     /db_xref="taxon:7955"
                     /clone="MGC:55464 IMAGE:2640032"
                     /tissue_type="Whole body, adult, (one male and one female,
                     including unfertilized eggs)"
                     /clone_lib="Sugano Kawakami zebrafish DRA"
                     /lab_host="DH10B"
                     /note="Vector: pME18S-FL3"
     gene            1..2764
                     /gene="sufu"
                     /gene_synonym="dre"
                     /gene_synonym="fi39e05"
                     /gene_synonym="Su(fu)"
                     /gene_synonym="wu:fi39e05"
                     /db_xref="GeneID:100001615"
                     /db_xref="ZFIN:ZDB-GENE-030131-6223"
     CDS             176..1633
                     /gene="sufu"
                     /gene_synonym="dre"
                     /gene_synonym="fi39e05"
                     /gene_synonym="Su(fu)"
                     /gene_synonym="wu:fi39e05"
                     /codon_start=1
                     /product="suppressor of fused homolog (Drosophila)"
                     /protein_id="AAH45348.1"
                     /db_xref="GeneID:100001615"
                     /db_xref="ZFIN:ZDB-GENE-030131-6223"
                     /translation="MDEMRPSSGAAAHLGLASIFPPGLQAIYGECRRLYPDQANPLQV
                     TAIVKYWLGGPDPLDYISMYRNAGCPGQDVPEHWHYVSLGLSDLYGDNRVHEFTGLEG
                     PSGFGFELTFRLKREAGETAPPTWPAELMQGLARYVFQSENTFCSGDHISWHSPLDNS
                     ESRIQHMLLTEDPQMHPVQTPFGHVSFLQIVGVCTEELQAAQQWNGQGILDLLRGVHI
                     AGGPWLITDMRRGESIFDIDPHLRQERVDKGIETDGSNLSGVSAKCAWDDLSRPPEDE
                     DDSRSICIGAQPRRLSDKDTEQIREALRKGLEIKSKSILPPISGQRHSHDRPQQSVGH
                     FQTQQISRSRKDSLESESSAAIVPHELVRTRQLESVHLKFNQESGTLIPMCLRGRLLH
                     GRHFTFKSINGDTAITFVSTGVEGAFATEEHPYAAHGPWLQILLTEEFVEQMLAEVQD
                     LSTRDVCKLPKEYSWPDKKLKISVLPDTVFDSPLQ"
ORIGIN      
        1 acatcaaacc acagaggaaa aactgcaaca ggggcttaac agagggggcg aaagtgtaac
       61 aaagcgtttt ccagcaccgg tgacttaatc gctttttcca atacggaagt tgaaaagaac
      121 aacacatttt cttgcttttc gagaactttt ccctgtttgg cgcggccgtg cggggatgga
      181 tgagatgcgg cctagcagcg gagcagcagc acacctcggc ctcgcctcga tctttccccc
      241 gggattgcag gccatttatg gggaatgcag acgtctgtat cccgaccagg cgaacccgct
      301 gcaagtcaca gccattgtga agtattggtt aggtggtcca gatcctctgg attacattag
      361 tatgtacaga aacgcgggat gtcctggaca agacgtacca gaacattggc actatgtcag
      421 cctgggtctc agtgacttgt atggagacaa cagagttcac gaatttacag gtctagaagg
      481 cccaagtggt tttggttttg agctcacgtt tcgtctgaag agagaagcag gagagacggc
      541 acccccaact tggcctgctg agctcatgca aggcttagct cgatacgtgt ttcaatcaga
      601 aaacacattc tgcagcggcg atcacatttc gtggcacagt ccattggaca acagcgagtc
      661 tcgaatccag cacatgcttc tcacagagga ccctcagatg cacccagtgc agaccccctt
      721 cggccacgtc tccttccttc agatcgtggg tgtttgcaca gaggagctgc aggcagcgca
      781 gcagtggaac ggtcaaggca ttctggacct gctgagagga gtgcacattg ctggaggtcc
      841 atggttaatc actgacatga gaagaggaga atccatattt gacattgatc cacatttgcg
      901 acaggaacga gtggataagg gcatcgagac ggatggctct aacctgagtg gggtgagtgc
      961 caagtgtgct tgggatgact tgagcagacc tcccgaggac gaggacgaca gcaggagcat
     1021 ttgcattggg gcacagccac gcagactgtc ggacaaagac accgaacaga ttagagaagc
     1081 cctgaggaaa ggactggaga ttaagagcaa gtctatcctg cctcccatca gtggtcagag
     1141 gcacagtcat gaccggccac aacaatcagt tggacatttc cagacccagc agatatcaag
     1201 gagtcgtaag gacagtctgg agagcgagag ctcagctgct attgtccctc atgagctggt
     1261 cagaacacga cagctagaaa gtgtacacct gaagttcaac caggagtctg ggactcttat
     1321 cccaatgtgc ctcagaggtc gtctgcttca tggccgacat ttcacattta aaagtattaa
     1381 tggagacacg gcaatcacct tcgtatccac tggggtggaa ggagcatttg ccaccgaaga
     1441 gcatccgtat gctgcgcacg gaccatggct acagatatta ctcactgagg agtttgtaga
     1501 gcagatgcta gcggaggttc aggatttgag cacccgtgat gtgtgtaagc tgccgaaaga
     1561 gtacagctgg cctgataaga agctaaagat ctcagtcctg ccagacactg tgtttgacag
     1621 cccgctgcaa taagactcac tgtgcctgat tacaaaccca caaactcttt tgcctacaga
     1681 cagctgaagg aaacagacac tcttgtccca gagagcatcg tagatgattg cacaagacag
     1741 aacattttat aaatgtgcta cattttgtat tgtgtccatt ataccacttg tctttgtgtg
     1801 ggtctaccta ttcaatccta attgtgtttc ttgtctcagt ttcaaaagac gtgctatgta
     1861 tttcttgttg aaattttagc agcacaagac aacgtgcaag cactggtgcc tttatttacc
     1921 ctggagtgtc atgttgagat aaaaatcacc tttcttaaag gaacagttca cccagaaatc
     1981 aaacaggcgt catttactca cacttaactt gttccaaacc tggcctctcg tcttttcata
     2041 ttgtttttct ggatgtcaaa actaccggtt ttcaacagtc ttcactgctg ttttgtgttc
     2101 aacagaatat tagaaagact aaacagtttg gagccacttt tgagagtgag taaatagtta
     2161 tttttgggtg aactgtcctt ttaaagtcct gcttgtaatg tgaaggtaag catactacaa
     2221 tgtttatata taaacaccaa gtctgagtat ctggttttgc tcaacttacc tatttaaaac
     2281 ccagtagtgc ctattaaatg atgatcatct ttcataaggg ctttaactgt tcaccagtag
     2341 gtggttagtc agttcaccta cacaatacca aagcctgtac attatgtgta gttacataca
     2401 acgtgcaaag taacatgatg aggagcatga aattgctttt tttttgttgt tcttttaaac
     2461 aatttcactt gtattaaact taatctcctt tgacattttg attgcattcc aagcctcctt
     2521 ataggaaagc aatttaactg gtttctgaat ggcagtcaat ttctctgaat gcgtggttgt
     2581 cgtttttggg atatgtgctc aatattttag gtcaaagtgt ataaaagaac ctctattagt
     2641 gcttttcaaa gatgaattta attagagtgt actgacatat tttgttttta aatcactaca
     2701 ctgcctgtgg ttttgttacc tttaagtgca ttaaagttat ttacataaaa aaaaaaaaaa
     2761 aaaa
//
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