LOCUS BC045348 2764 bp mRNA linear VRT 17-DEC-2007
DEFINITION Danio rerio suppressor of fused homolog (Drosophila), mRNA (cDNA
clone MGC:55464 IMAGE:2640032), complete cds.
ACCESSION BC045348
VERSION BC045348.1
KEYWORDS MGC.
SOURCE Danio rerio (zebrafish)
ORGANISM Danio rerio
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
Cypriniformes; Danionidae; Danioninae; Danio.
REFERENCE 1 (bases 1 to 2764)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2764)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JAN-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Sumio Sugano and Dr. Ko-ichi Kawakami
cDNA Library Preparation: Dr. Sumio Sugano and Dr. Ko-ichi Kawakami
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 101 Row: j Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 28278854.
FEATURES Location/Qualifiers
source 1..2764
/organism="Danio rerio"
/mol_type="mRNA"
/strain="AB"
/db_xref="taxon:7955"
/clone="MGC:55464 IMAGE:2640032"
/tissue_type="Whole body, adult, (one male and one female,
including unfertilized eggs)"
/clone_lib="Sugano Kawakami zebrafish DRA"
/lab_host="DH10B"
/note="Vector: pME18S-FL3"
gene 1..2764
/gene="sufu"
/gene_synonym="dre"
/gene_synonym="fi39e05"
/gene_synonym="Su(fu)"
/gene_synonym="wu:fi39e05"
/db_xref="GeneID:100001615"
/db_xref="ZFIN:ZDB-GENE-030131-6223"
CDS 176..1633
/gene="sufu"
/gene_synonym="dre"
/gene_synonym="fi39e05"
/gene_synonym="Su(fu)"
/gene_synonym="wu:fi39e05"
/codon_start=1
/product="suppressor of fused homolog (Drosophila)"
/protein_id="AAH45348.1"
/db_xref="GeneID:100001615"
/db_xref="ZFIN:ZDB-GENE-030131-6223"
/translation="MDEMRPSSGAAAHLGLASIFPPGLQAIYGECRRLYPDQANPLQV
TAIVKYWLGGPDPLDYISMYRNAGCPGQDVPEHWHYVSLGLSDLYGDNRVHEFTGLEG
PSGFGFELTFRLKREAGETAPPTWPAELMQGLARYVFQSENTFCSGDHISWHSPLDNS
ESRIQHMLLTEDPQMHPVQTPFGHVSFLQIVGVCTEELQAAQQWNGQGILDLLRGVHI
AGGPWLITDMRRGESIFDIDPHLRQERVDKGIETDGSNLSGVSAKCAWDDLSRPPEDE
DDSRSICIGAQPRRLSDKDTEQIREALRKGLEIKSKSILPPISGQRHSHDRPQQSVGH
FQTQQISRSRKDSLESESSAAIVPHELVRTRQLESVHLKFNQESGTLIPMCLRGRLLH
GRHFTFKSINGDTAITFVSTGVEGAFATEEHPYAAHGPWLQILLTEEFVEQMLAEVQD
LSTRDVCKLPKEYSWPDKKLKISVLPDTVFDSPLQ"
ORIGIN
1 acatcaaacc acagaggaaa aactgcaaca ggggcttaac agagggggcg aaagtgtaac
61 aaagcgtttt ccagcaccgg tgacttaatc gctttttcca atacggaagt tgaaaagaac
121 aacacatttt cttgcttttc gagaactttt ccctgtttgg cgcggccgtg cggggatgga
181 tgagatgcgg cctagcagcg gagcagcagc acacctcggc ctcgcctcga tctttccccc
241 gggattgcag gccatttatg gggaatgcag acgtctgtat cccgaccagg cgaacccgct
301 gcaagtcaca gccattgtga agtattggtt aggtggtcca gatcctctgg attacattag
361 tatgtacaga aacgcgggat gtcctggaca agacgtacca gaacattggc actatgtcag
421 cctgggtctc agtgacttgt atggagacaa cagagttcac gaatttacag gtctagaagg
481 cccaagtggt tttggttttg agctcacgtt tcgtctgaag agagaagcag gagagacggc
541 acccccaact tggcctgctg agctcatgca aggcttagct cgatacgtgt ttcaatcaga
601 aaacacattc tgcagcggcg atcacatttc gtggcacagt ccattggaca acagcgagtc
661 tcgaatccag cacatgcttc tcacagagga ccctcagatg cacccagtgc agaccccctt
721 cggccacgtc tccttccttc agatcgtggg tgtttgcaca gaggagctgc aggcagcgca
781 gcagtggaac ggtcaaggca ttctggacct gctgagagga gtgcacattg ctggaggtcc
841 atggttaatc actgacatga gaagaggaga atccatattt gacattgatc cacatttgcg
901 acaggaacga gtggataagg gcatcgagac ggatggctct aacctgagtg gggtgagtgc
961 caagtgtgct tgggatgact tgagcagacc tcccgaggac gaggacgaca gcaggagcat
1021 ttgcattggg gcacagccac gcagactgtc ggacaaagac accgaacaga ttagagaagc
1081 cctgaggaaa ggactggaga ttaagagcaa gtctatcctg cctcccatca gtggtcagag
1141 gcacagtcat gaccggccac aacaatcagt tggacatttc cagacccagc agatatcaag
1201 gagtcgtaag gacagtctgg agagcgagag ctcagctgct attgtccctc atgagctggt
1261 cagaacacga cagctagaaa gtgtacacct gaagttcaac caggagtctg ggactcttat
1321 cccaatgtgc ctcagaggtc gtctgcttca tggccgacat ttcacattta aaagtattaa
1381 tggagacacg gcaatcacct tcgtatccac tggggtggaa ggagcatttg ccaccgaaga
1441 gcatccgtat gctgcgcacg gaccatggct acagatatta ctcactgagg agtttgtaga
1501 gcagatgcta gcggaggttc aggatttgag cacccgtgat gtgtgtaagc tgccgaaaga
1561 gtacagctgg cctgataaga agctaaagat ctcagtcctg ccagacactg tgtttgacag
1621 cccgctgcaa taagactcac tgtgcctgat tacaaaccca caaactcttt tgcctacaga
1681 cagctgaagg aaacagacac tcttgtccca gagagcatcg tagatgattg cacaagacag
1741 aacattttat aaatgtgcta cattttgtat tgtgtccatt ataccacttg tctttgtgtg
1801 ggtctaccta ttcaatccta attgtgtttc ttgtctcagt ttcaaaagac gtgctatgta
1861 tttcttgttg aaattttagc agcacaagac aacgtgcaag cactggtgcc tttatttacc
1921 ctggagtgtc atgttgagat aaaaatcacc tttcttaaag gaacagttca cccagaaatc
1981 aaacaggcgt catttactca cacttaactt gttccaaacc tggcctctcg tcttttcata
2041 ttgtttttct ggatgtcaaa actaccggtt ttcaacagtc ttcactgctg ttttgtgttc
2101 aacagaatat tagaaagact aaacagtttg gagccacttt tgagagtgag taaatagtta
2161 tttttgggtg aactgtcctt ttaaagtcct gcttgtaatg tgaaggtaag catactacaa
2221 tgtttatata taaacaccaa gtctgagtat ctggttttgc tcaacttacc tatttaaaac
2281 ccagtagtgc ctattaaatg atgatcatct ttcataaggg ctttaactgt tcaccagtag
2341 gtggttagtc agttcaccta cacaatacca aagcctgtac attatgtgta gttacataca
2401 acgtgcaaag taacatgatg aggagcatga aattgctttt tttttgttgt tcttttaaac
2461 aatttcactt gtattaaact taatctcctt tgacattttg attgcattcc aagcctcctt
2521 ataggaaagc aatttaactg gtttctgaat ggcagtcaat ttctctgaat gcgtggttgt
2581 cgtttttggg atatgtgctc aatattttag gtcaaagtgt ataaaagaac ctctattagt
2641 gcttttcaaa gatgaattta attagagtgt actgacatat tttgttttta aatcactaca
2701 ctgcctgtgg ttttgttacc tttaagtgca ttaaagttat ttacataaaa aaaaaaaaaa
2761 aaaa
//