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Danio rerio IFT81 mRNA, complete cds

GenBank: AY618922.1

FASTA Graphics 

LOCUS       AY618922                2986 bp    mRNA    linear   VRT 31-AUG-2004
DEFINITION  Danio rerio IFT81 mRNA, complete cds.
ACCESSION   AY618922
VERSION     AY618922.1
KEYWORDS    .
SOURCE      Danio rerio (zebrafish)
  ORGANISM  Danio rerio
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
            Cypriniformes; Danionidae; Danioninae; Danio.
REFERENCE   1  (bases 1 to 2986)
  AUTHORS   Sun,Z., Amsterdam,A., Pazour,G.J., Cole,D.G., Miller,M.S. and
            Hopkins,N.
  TITLE     A genetic screen in zebrafish identifies cilia genes as a principal
            cause of cystic kidney
  JOURNAL   Development 131 (16), 4085-4093 (2004)
   PUBMED   15269167
REFERENCE   2  (bases 1 to 2986)
  AUTHORS   Amsterdam,A. and Hopkins,N.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-MAY-2004) Center for Cancer Research, Massachusetts
            Institute of Technology, 77 Massachusetts Ave, Cambridge, MA 02139,
            USA
FEATURES             Location/Qualifiers
     source          1..2986
                     /organism="Danio rerio"
                     /mol_type="mRNA"
                     /db_xref="taxon:7955"
     CDS             274..2301
                     /codon_start=1
                     /product="IFT81"
                     /protein_id="AAT39118.1"
                     /translation="MSEQLKFIVEQLNKEPFKKNFNLITFDSLEPMQLLQTLSDVLAE
                     IDPKQAIDIREELPEQTAKRMFTLLGMLKYKPSGGMSEVSSFRQGLVSGSKPVVHPIL
                     HWLLQRIPELKKRAYLARFLVKLEVPAEFLQDDVIAETYHQYEELVEGFKNIHKECEQ
                     LKSSGFSTAEIRRDIVAMEEEKDQLIKRVERLRKRVEAVANHQRMLDLARQLRVERER
                     EESLAHQKQEQKNQLFQAEQRLQRCQIQLKDLQQAAADEKPESLMKRLEEDIKFNSYM
                     VSEKLPRELENMRKVVQYLQKVASEPAMGQAELRELEDKIRETNTEINHLIEKRMMRN
                     DPMDDKLSLFRQQAAIIVRKKETKVEELQEAREELAAVERELNMKTSQAQERGGELIR
                     GDEFKRYVAKMRGKSSTYKKKRQEIAELKAEYGVLQRTEEILRERHTAGQQQLQSLEA
                     QRGISGYSDTQEELERVSAIKSELDEMKGRTLDDMSEMVKKLNSVIAEKKSALSPLIK
                     DLRALRQEHAELAPEYEEKKAQYETCAAGLESNRSTLEQEVRTLREETAQEESRYHHI
                     NCEREIIESQIQRAAEQSKISQSMDVQVRRTALREKYIANTAEQESLGKVLRQQVKQV
                     RENQEPNMRQMKMWKDLETLLECKKQCYLKAQSQAPIGHVIQDVGKDMLVL"
ORIGIN      
        1 gacaacggtt tctaggcagg atttgttgac gtgagaggga acgttatacg acgttattat
       61 acaaaaattt attatcgttt tcatttatct aaaatcaaat attaaacgac attctgtgct
      121 tgcgctacaa aagctataat acggtaaata attcggctgt tagctgctaa cgtgagttgg
      181 aaaagttatt ttgaacacat cgcaagctaa cggaagttaa cgttgtgaga atatttttgt
      241 tagcggtaaa agccactaac gtaattcttc aagatgagcg aacagcttaa atttatcgtt
      301 gaacagctga acaaggagcc tttcaagaaa aacttcaatc tcattacatt cgactctctg
      361 gagccaatgc agcttctgca gactttaagt gatgttctgg ctgaaattga tccaaagcaa
      421 gccattgata tacgtgagga attgcctgag cagacagcca agagaatgtt cactcttctg
      481 ggaatgctga aatacaaacc ttctggagga atgtctgaag taagcagttt tcgtcagggt
      541 ttggtgtcgg gcagtaagcc tgtggtgcac cccatcctgc actggctgtt acagaggatt
      601 ccagagctga agaagagagc gtatctggcc agattcctcg tcaaactaga ggttcctgct
      661 gagtttctgc aagatgatgt cattgctgag acctaccacc agtatgagga gctggtggag
      721 ggcttcaaga acatccacaa agagtgtgaa cagttaaaga gttctgggtt ctccactgct
      781 gagattcgac gggacattgt tgcaatggag gaggagaagg atcagctcat caaaagagtg
      841 gaacgtctta gaaaaagggt ggaggcagtg gcaaaccacc agcgcatgct ggacctggcc
      901 agacagttaa gagtggaaag agaaagagag gaatcactcg ctcatcagaa acaggagcag
      961 aaaaaccagc tcttccaggc agagcagaga ctgcagagat gtcagatcca gctcaaagac
     1021 ttacagcagg cagcagcaga cgaaaagcca gagagcctta tgaagagact tgaggaggac
     1081 attaagttca actcctacat ggtgtctgag aagctcccca gagagttgga gaatatgaga
     1141 aaggtggtgc agtacctaca gaaggtggcg tctgagcctg ctatgggcca ggcagaactg
     1201 agggagcttg aggacaagat aagagaaacc aacactgaga tcaatcattt gattgaaaag
     1261 aggatgatgc ggaacgaccc aatggatgat aaactctctc ttttcaggca gcaggccgct
     1321 attatagtcc gtaagaagga aacaaaggtg gaggagttgc aggaggcccg tgaggagctg
     1381 gcggcagtgg aaagagagct gaacatgaag accagtcagg cacaagagcg aggaggagag
     1441 ctgatccgtg gagatgagtt taagagatat gtggccaaga tgcgtggtaa gagcagcaca
     1501 tataagaaaa agcgtcagga gatagctgag ctgaaggcag agtatggtgt gctacagaga
     1561 accgaagaga tcctgagaga acgacacaca gctggacaac agcagctgca atctctggag
     1621 gctcagcggg gaatctcagg ctacagcgat actcaggagg agttggagag agtttctgct
     1681 atcaagagcg agctggatga gatgaaggga agaacactgg atgacatgtc tgaaatggta
     1741 aagaagctga attcagtgat agcagagaag aagtctgctc tatctccgct gataaaggac
     1801 ctgagagctc taagacagga acacgcggag ctcgcaccag agtacgagga gaaaaaggct
     1861 cagtatgaaa cctgtgctgc aggactcgag agcaacagat ccacgctgga acaggaagtg
     1921 agaacactca gggaagagac ggcacaggaa gaaagccgat atcatcacat taactgcgag
     1981 agagagatca ttgagagtca aattcagaga gcggcagaac aaagcaagat cagtcagtca
     2041 atggacgtac aggtgcggag gacggctctc agagagaagt acattgcaaa cacagcagag
     2101 caggagtcct tgggcaaggt tctccgtcag caggtgaagc aggtgcgaga gaaccaggag
     2161 cccaatatga gacagatgaa gatgtggaag gatctggaaa cgctgctgga gtgcaagaaa
     2221 cagtgctacc tcaaggctca gagccaggcg cctattgggc acgtcatcca ggatgttggc
     2281 aaggatatgc tggttctgtg atgccatttg ccttgtaaat gttgttcctt tttgtcattg
     2341 attattacaa agacactagg gaaaattatt tatttaatag catagtttac ccaacaaatt
     2401 ttgtttactc acactaaaat tgttctaacc ttttataaat atctttcttc tagacacaaa
     2461 acaagatatt ctgaagaatg ttaaaaaagc agcaactgac atccatagta ggaagaaaaa
     2521 atgctattga agtcattagc tgtttgtttt tctttgtagt tttcagtata tcttcatttg
     2581 tgaatttaaa ttcttcagaa atttcagaag aaagaaatta aacatatttg gaacaagtag
     2641 aggatgagta aataatgaca gaattttcat ttttgtgggg aactgtccct ttaagagacc
     2701 acttcaaaat tctctgttta tctgtacatc tgtattagat gtgggtttaa gtgaattgtt
     2761 tatatttgtt taaatctata aatacctgat gaaattagtt tcaaatttca aaaaaccttt
     2821 tgtcattaga gcattatttt gtttgttctc tatataaaca tttctgaaag catggcacct
     2881 ttgttatttc aagcaaagaa atgctctaaa tgacagcatt gttgtttgaa atatttttgg
     2941 aaaaaatggc atcagtagtt cacagaatta aaaaagactg agtaac
//
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Reference sequence information

  • RefSeq mRNA
    See reference mRNA sequence for the ift81 gene (NM_001002313.1).

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