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Mus musculus PYNOD mRNA, complete cds

GenBank: AY489193.1

FASTA Graphics 

LOCUS       AY489193                2477 bp    mRNA    linear   ROD 01-JUN-2004
DEFINITION  Mus musculus PYNOD mRNA, complete cds.
ACCESSION   AY489193
VERSION     AY489193.1
KEYWORDS    .
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2477)
  AUTHORS   Wang,Y., Hasegawa,M., Imamura,R., Kinoshita,T., Kondo,C., Konaka,K.
            and Suda,T.
  TITLE     PYNOD, a novel Apaf-1/CED4-like protein is an inhibitor of ASC and
            caspase-1
  JOURNAL   Int. Immunol. 16 (6), 777-786 (2004)
   PUBMED   15096476
REFERENCE   2  (bases 1 to 2477)
  AUTHORS   Suda,T. and Wang,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-NOV-2003) Cancer Research Institute, Kanazawa
            University, 13-1 Takaramachi, Kanazawa 920-0934, Japan
FEATURES             Location/Qualifiers
     source          1..2477
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="BALB/c"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7E3"
                     /tissue_type="brain"
     CDS             18..2039
                     /function="inhibitor for ASC-mediated NF-kappa B
                     activation and caspase 1-mediated IL-1 beta processing"
                     /note="Apaf-1-like protein; pyrin-like domain- and
                     nucleotide-binding and oligomerization domain-containing
                     protein"
                     /codon_start=1
                     /product="PYNOD"
                     /protein_id="AAS67385.1"
                     /translation="MALARANSPQEALLWALNDLEENSFKTLKFHLRDVTQFHLARGE
                     LESLSQVDLASKLISMYGAQEAVRVVSRSLLAMNLMELVDYLNQVCLNDYREIYREHV
                     RCLEERQDWGVNSSHNKLLLMATSSSGGRRSPSCSDLEQELDPVDVETLFAPEAESYS
                     TPPIVVMQGSAGTGKTTLVKKLVQDWSKGKLYPGQFDYVFYVSCREVVLLPKCDLPNL
                     ICWCCGDDQAPVTEILRQPGRLLFILDGYDELQKSSRAECVLHILMRRREVPCSLLIT
                     TRPPALQSLEPMLGERRHVLVLGFSEEERETYFSSCFTDKEQLKNALEFVQNNAVLYK
                     ACQVPGICWVVCSWLKKKMARGQEVSETPSNSTDIFTAYVSTFLPTDGNGDSSELTRH
                     KVLKSLCSLAAEGMRHQRLLFEEEVLRKHGLDGPSLTAFLNCIDYRAGLGIKKFYSFR
                     HISFQEFFYAMSFLVKEDQSQQGEATHKEVAKLVDPENHEEVTLSLQFLFDMLKTEGT
                     LSLGLKFCFRIAPSVRQDLKHFKEQIEAIKYKRSWDLEFSLYDSKIKKLTQGIQMKDV
                     ILNVQHLDEKKSDKKKSVSVTSSFSSGKVQSPFLGNDKSTRKQKKASNGKSRGAEEPA
                     PGVRNRRLASREKGHMEMNDKEDGGVEEQEDEEGQTLKKDGEMIDKMNG"
     misc_difference 1298
                     /note="compared to AK032446"
                     /replace="t"
     misc_difference 1676
                     /note="compared to AK032446"
                     /replace="a"
     misc_difference 2257
                     /note="compared to AK032446"
                     /replace="g"
ORIGIN      
        1 gctgaactct gaccatcatg gccttggcac gggccaacag cccccaggag gcactgcttt
       61 gggccttgaa tgaccttgag gagaacagtt tcaagacgct gaagttccac ttacgagatg
      121 tgacccaatt tcatctggcc cgaggggaac tggagagtct gagtcaggtg gacctggcat
      181 caaaactgat ttcaatgtac ggagcacagg aagccgtgag agtggtgagc aggagcttgc
      241 tggccatgaa cttgatggag cttgtagact acctcaacca ggtttgtctg aatgattaca
      301 gagaaatcta ccgggagcat gtgcgctgct tggaggagag gcaagattgg ggtgttaata
      361 gcagccacaa taagctgctc ctgatggcca catccagttc agggggtcgc agatcacctt
      421 cctgttctga cctggaacag gagttggatc ctgtcgatgt ggagacttta tttgctccgg
      481 aggcggagtc ctactcaacc ccgcccatag tggtgatgca aggatctgcg ggcactggaa
      541 agacaaccct ggtcaaaaaa ctggtgcagg actggtccaa agggaagctg tacccaggcc
      601 agtttgatta tgttttctac gtgagctgca gagaagtggt cctgttaccc aagtgtgacc
      661 tgcccaacct catctgctgg tgttgtggag atgatcaagc cccagtcaca gagattctgc
      721 ggcagcctgg gcggctcctg ttcatcctgg atggctatga tgagttacag aagtccagtc
      781 gtgccgagtg cgtacttcac attctgatga ggagaaggga ggtaccatgc tcccttctca
      841 tcaccacgcg gcctccagct ttgcagagtc tggaacccat gttgggtgaa cggcgacatg
      901 tccttgtctt aggcttctct gaggaggaga gggaaacata tttcagctcc tgttttacgg
      961 ataaggagca attgaaaaat gcccttgagt ttgtgcaaaa caatgctgtt ctctataaag
     1021 catgccaggt tccaggcatt tgctgggtgg tctgctcctg gctgaagaag aagatggcga
     1081 gaggtcagga agtctcagag acacctagca acagtacaga catcttcact gcttatgtgt
     1141 ccacctttct gcccactgat ggcaatggag acagctctga gcttaccagg cacaaggtac
     1201 tgaagagtct gtgctccttg gctgcggagg ggatgcggca ccagaggctg ctatttgaag
     1261 aagaggtcct cagaaagcat ggcttagacg gccccagcct tactgctttc ctgaactgca
     1321 tcgactaccg agcggggctt ggcatcaaga aattctacag ctttcgccac atcagcttcc
     1381 aggaattttt ctatgccatg tccttccttg tgaaggagga ccagagtcag cagggagagg
     1441 ccacacacaa agaagtggca aagctggtgg atccagagaa ccatgaagag gtgactctca
     1501 gtttgcagtt cttattcgac atgttgaaaa cagagggcac cttgagcttg gggctgaagt
     1561 tctgcttcag aatcgctcct tcggtaaggc aggatctgaa gcattttaaa gagcaaatag
     1621 aagccataaa gtacaaaagg tcatgggatc tggaattctc tctctatgat tctaagataa
     1681 agaagctcac acaaggtatc cagatgaaag atgtcattct caatgtgcaa catttggatg
     1741 aaaagaaatc tgacaagaag aagtcagttt cagtgacaag cagctttagt agcgggaagg
     1801 tacaaagtcc attcttggga aatgataaaa gcaccaggaa acaaaagaag gcatctaatg
     1861 ggaaaagcag aggggcagag gaaccagccc cgggggttag aaaccgtagg ctggcaagca
     1921 gagaaaaggg tcatatggag atgaatgata aggaggatgg tggggtggag gaacaggagg
     1981 atgaggaagg acagacactt aaaaaggatg gagagatgat agataagatg aatgggtagg
     2041 agagagagag agagagagag agagagagag agagagagag agaaataaaa gataattaga
     2101 taattaagac caggagtctt agcatgtgca atgaaagatt cactgaaaga accagccctt
     2161 accacagata ttggaagttt aattagttag catccctccc ccctagtagg tgctcagtat
     2221 ctcctgtggt gtgaagtcac tttgagtagc cccattctac gctaacatcc aatgactaga
     2281 ctttaattct aacattagat tcttttttaa ataaaataaa ctttaaaata agaaagtgag
     2341 aatcacatac attctgtaaa atataggcat atatggaaca catgtaaagg aaacatactt
     2401 tggtataatg gaaagtccta ttgactctat ttgtgttcaa gtattgctta aataaagaat
     2461 agcttctcat tctttct
//
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Reference sequence information

  • RefSeq mRNA
    See reference mRNA sequence for the Nlrp10 gene (NM_175532.3).

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