LOCUS AY051946 1716 bp mRNA linear INV 27-AUG-2001
DEFINITION Drosophila melanogaster LD42056 full length cDNA.
ACCESSION AY051946
VERSION AY051946.1
KEYWORDS FLI_CDNA.
SOURCE Drosophila melanogaster (fruit fly)
ORGANISM Drosophila melanogaster
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
REFERENCE 1 (bases 1 to 1716)
AUTHORS Stapleton,M., Brokstein,P., Hong,L., Agbayani,A., Carlson,J.,
Champe,M., Chavez,C., Dorsett,V., Farfan,D., Frise,E., George,R.,
Gonzalez,M., Guarin,H., Li,P., Liao,G., Miranda,A., Mungall,C.J.,
Nunoo,J., Pacleb,J., Paragas,V., Park,S., Phouanenavong,S., Wan,K.,
Yu,C., Lewis,S.E., Rubin,G.M. and Celniker,S.
TITLE Direct Submission
JOURNAL Submitted (10-AUG-2001) Berkeley Drosophila Genome Project,
Lawrence Berkeley National Laboratory, One Cyclotron Road,
Berkeley, CA 94720, USA
COMMENT Sequence submitted by:
Berkeley Drosophila Genome Project
Lawrence Berkeley National Laboratory
Berkeley, CA 94720
This clone was sequenced as part of a high-throughput process to
sequence clones from Drosophila Gene Collection 1 (Rubin et al.,
Science 2000). The sequence has been subjected to integrity checks
for sequence accuracy, presence of a polyA tail and contiguity
within 100 kb in the genome. Thus we believe the sequence to
reflect accurately this particular cDNA clone. However, there are
artifacts associated with the generation of cDNA clones that may
have not been detected in our initial analyses such as internal
priming, priming from contaminating genomic DNA, retained introns
due to reverse transcription of unspliced precursor RNAs, and
reverse transcriptase errors that result in single base changes.
For further information about this sequence, including its location
and relationship to other sequences, please visit our Web site
(http://fruitfly.berkeley.edu) or send email to
cdna@fruitfly.berkeley.edu.
FEATURES Location/Qualifiers
source 1..1716
/organism="Drosophila melanogaster"
/mol_type="mRNA"
/strain="y; cn bw sp"
/db_xref="taxon:7227"
/map="21B5-21B5"
gene 1..1716
/gene="CG3645"
/note="alignment with genomic scaffold AE003590. gene does
not completely overlap longest ORF"
/db_xref="FLYBASE:FBgn0031238"
CDS 103..1620
/gene="CG3645"
/note="Longest ORF"
/codon_start=1
/product="LD42056p"
/protein_id="AAK93370.1"
/db_xref="FLYBASE:FBgn0031238"
/translation="MVNDEDAAHQRPSKPTGYNFYRSSLGSPRYVVAPMVDQSELAWR
MLCRRYGAELCYSPMYHANLFATDPKYRKDALQTCPEDRPLIIQFCGNDAQQILDAAL
LAQDHCDAVDINLGCPQAIAKRGHYGSFLQDEWELLTEIVSTLHAKLAVPVTCKIRIF
EDLEKTIRYAKMLEAAGCQLLTVHGRTREQKGPLTGVANWNYIKNVRQHIKIPMLANG
NILALDDVHRCLTETGVDGVMSAEGNLHNPAIFKGVSPPVWQMAHEYLELVQLHPCPS
SFIRGHLFKLFHHIMNIRQNSELRQYLATANQLVQFQAVVQQVRAKYEPFHKGEVPYE
PEQMAAGSEEDLPLSPWLCQPYIRASPESHRQKIAEKVREAEDPNRTKRQYFDKDGKE
ISRKRMKKLRRRQRRPNKTEAQIQHRHERRLEYCSECANPQGSKCEFQLCRVCCKDRC
YNNDRDCPGHGIFIKSRRARAKLFEEHIAPQDHQKVTRTSDDDLTIAPTDAQEPL"
ORIGIN
1 cttttgaata aaaaatcaaa ttaatagtgt ttactaggaa aaacgtatga aactcagtga
61 aaaaactttg caaaaaactt ttggatttca tttgaatttg ccatggtgaa cgatgaagac
121 gccgcgcacc aaagacctag caagcccacc ggatacaact tctaccgctc ctccttggga
181 tccccgcgtt atgtagtggc tcccatggtg gatcaaagcg agctggcctg gcgaatgctg
241 tgccgacgct atggcgccga actctgctac tcgccaatgt accatgcgaa cctcttcgcc
301 acagacccca agtatcgcaa ggatgccttg cagacgtgtc ccgaggacag gccattgatc
361 atccagttct gtggcaacga tgctcaacaa atcctggatg cagcactcct ggcgcaggac
421 cactgcgacg cggtggacat aaatttgggt tgtccccagg ccattgccaa gagaggtcac
481 tacggatcct tcctgcagga tgagtgggag ctgctgacag agattgtgag cacactgcac
541 gcaaaactag ccgttcctgt aacttgcaag attcgcatct tcgaggacct tgagaagacc
601 attaggtatg ccaagatgct ggaggcggcc ggctgccagc ttctgactgt ccacggtagg
661 accagagagc agaagggtcc gctgaccggg gtggctaatt ggaactacat taagaatgtg
721 cgccagcaca tcaagattcc aatgcttgcc aacggaaaca tcctggccct ggacgacgtt
781 catcgttgtc tgactgaaac aggagtcgat ggtgtaatga gcgccgaggg taatctgcac
841 aatccggcca tctttaaagg agtctcaccg cccgtctggc aaatggccca tgagtacttg
901 gagctcgttc agctccatcc gtgcccgagt tcctttatac gaggacatct cttcaagctc
961 ttccatcaca tcatgaatat ccggcagaac tctgagttac ggcaatacct agccactgca
1021 aatcagctcg tgcaattcca agccgtcgtg caacaagtac gggcaaaata cgagccgttc
1081 cacaagggcg aggtgccata cgagcccgaa caaatggctg ctggatcaga ggaagatctg
1141 ccactttctc cctggctgtg tcaaccatat atacgcgcct cacccgaatc ccatcgccag
1201 aagattgccg aaaaggtgcg cgaggctgag gatcccaacc gaaccaagcg gcagtacttc
1261 gacaaggacg gcaaggagat ctcccgcaaa cggatgaaga aacttcgaag acgccagcga
1321 agacccaaca aaacggaggc ccagatccag catcggcacg agaggcgcct ggaatactgc
1381 tcggaatgcg ccaatcccca gggatccaag tgcgagttcc agctgtgccg cgtgtgctgc
1441 aaggacaggt gctacaacaa cgatcgcgat tgtcctggtc acgggatctt catcaaatcc
1501 cgccgagcca gggccaagct ttttgaggag cacatcgccc cgcaggacca ccagaaggtg
1561 acgagaactt cagacgatga cctgacgata gccccaacgg atgcgcagga gccgctttga
1621 ccttaaacct gtactttagg aaacaccctt cttgtttttg tttctatgac tgcgaataaa
1681 aaaaagcttg ttttaaaaaa aaaaaaaaaa aaaaaa
//