LOCUS BY749745 685 bp mRNA linear EST 17-DEC-2002
DEFINITION BY749745 RIKEN full-length enriched, B6-derived CD11 +ve dendritic
cells Mus musculus cDNA clone F730031I12 5', mRNA sequence.
ACCESSION BY749745
VERSION BY749745.1
DBLINK BioSample: SAMN00171902
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 685)
AUTHORS Okazaki,Y., Furuno,M., Kasukawa,T., Adachi,J., Bono,H., Kondo,S.,
Nikaido,I., Osato,N., Saito,R., Suzuki,H., Yamanaka,I.,
Kiyosawa,H., Yagi,K., Tomaru,Y., Hasegawa,Y., Nogami,A.,
Schonbach,C., Gojobori,T., Baldarelli,R., Hill,D.P., Bult,C.,
Hume,D.A., Quackenbush,J., Schriml,L.M., Kanapin,A., Matsuda,H.,
Batalov,S., Beisel,K.W., Blake,J.A., Bradt,D., Brusic,V.,
Chothia,C., Corbani,L.E., Cousins,S., Dalla,E., Dragani,T.A.,
Fletcher,C.F., Forrest,A., Frazer,K.S., Gaasterland,T.,
Gariboldi,M., Gissi,C., Godzik,A., Gough,J., Grimmond,S.,
Gustincich,S., Hirokawa,N., Jackson,I.J., Jarvis,E.D., Kanai,A.,
Kawaji,H., Kawasawa,Y., Kedzierski,R.M., King,B.L., Konagaya,A.,
Kurochkin,I.V., Lee,Y., Lenhard,B., Lyons,P.A., Maglott,D.R.,
Maltais,L., Marchionni,L., McKenzie,L., Miki,H., Nagashima,T.,
Numata,K., Okido,T., Pavan,W.J., Pertea,G., Pesole,G.,
Petrovsky,N., Pillai,R., Pontius,J.U., Qi,D., Ramachandran,S.,
Ravasi,T., Reed,J.C., Reed,D.J., Reid,J., Ring,B.Z., Ringwald,M.,
Sandelin,A., Schneider,C., Semple,C.A., Setou,M., Shimada,K.,
Sultana,R., Takenaka,Y., Taylor,M.S., Teasdale,R.D., Tomita,M.,
Verardo,R., Wagner,L., Wahlestedt,C., Wang,Y., Watanabe,Y.,
Wells,C., Wilming,L.G., Wynshaw-Boris,A., Yanagisawa,M., Yang,I.,
Yang,L., Yuan,Z., Zavolan,M., Zhu,Y., Zimmer,A., Carninci,P.,
Hayatsu,N., Hirozane-Kishikawa,T., Konno,H., Nakamura,M.,
Sakazume,N., Sato,K., Shiraki,T., Waki,K., Kawai,J., Aizawa,K.,
Arakawa,T., Fukuda,S., Hara,A., Hashizume,W., Imotani,K., Ishii,Y.,
Itoh,M., Kagawa,I., Miyazaki,A., Sakai,K., Sasaki,D., Shibata,K.,
Shinagawa,A., Yasunishi,A., Yoshino,M., Waterston,R., Lander,E.S.,
Rogers,J., Birney,E. and Hayashizaki,Y.
TITLE Analysis of the mouse transcriptome based on functional annotation
of 60,770 full-length cDNAs
JOURNAL Nature 420, 563-573 (2002)
PUBMED 12466851
COMMENT Contact: Yoshihide Hayashizaki
Omics Science Center, RIKEN Yokohama Institute
The Institute of Physical and Chemical Research (RIKEN)
1-7-22 Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan
Email: URL:http://www.osc.riken.jp/
Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P.,
Fukuda,S., Hashizume,W., Hayashida,K., Hirozane,T., Hori,F.,
Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kawai,J., Kojima,Y.,
Kondo,S., Konno,H., Koya,S., Miyazaki,A., Murata,M., Nakamura,M.,
Nomura,K., Numazaki,R., Ohno,M., Ohsato,N., Saito,R., Sakazume,N.,
Sano,H., Sasaki,D., Sato,K., Shibata,K., Shiraki,T., Tagami,M.,
Takeda,Y., Waki,K., Watahiki,A., Muramatsu,M. and Hayashizaki,Y.
Direct Submission
Computational Analysis of Full-Length Mouse cDNAs Compared with
Human Genome Sequences Mamm. Genome. 12, 673-677 (2001)
Normalization and subtraction of cap-trapper-selected cDNAs to
prepare full-length cDNA libraries for rapid discovery of new
genes. Genome Res. 10 (10), 1617-1630 (2000)
RIKEN integrated sequence analysis (RISA) system--384-format
sequencing pipeline with 384 multicapillary sequencer. Genome Res.
10 (11), 1757-1771 (2000)
Computer-based methods for the mouse full-length cDNA
encyclopedia: real-time sequence clustering for construction of a
nonredundant cDNA library. Genome Res. 11 (2), 281-289 (2001)
cDNA library was prepared and sequenced in Mouse Genome
Encyclopedia Project of Genome Exploration Research Group in Riken
Genomic Sciences Center and Genome Science Laboratory in RIKEN.
Division of Experimental Animal Research in Riken contributed to
prepare mouse tissues.
Tissues were provided by Dr. John Todd (Dept. of Medical Genetics
Wellcome Trust Centre for Molecular Mechanisms in Disease Wellcome
Trust/MRC building Addenbrookes Hospital Cambridge) whose
assistance we gratefully acknowledge.
Please visit our web site (http://genome.gsc.riken.go.jp) for
further details.
FEATURES Location/Qualifiers
source 1..685
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="taxon:10090"
/clone="F730031I12"
/cell_type="B6-derived CD11 +ve dendritic cells"
/clone_lib="SAMN00171902 RIKEN full-length enriched,
B6-derived CD11 +ve dendritic cells"
ORIGIN
1 gaggaccgtg ttcaacccat ctgttggttg ttggatttct caccttttag ggtttaatgc
61 ttttagctct tcatacattt taggtattaa tctgctgatg catgagtagc tgctatatat
121 tttctatttt cttccttttt atttttggtt ttttcgagac agggtttctc tgtatagccc
181 tggctgtcct ggaactcact ctgtagacca ggctggcctc gaactcagaa atctgcctgc
241 ctctgcctcc cgagtgctgg gattaaaggc gtgtactacc actgcccggc cttttttttt
301 tctttttttt actttccttc tttctttgct tctttctatt tttctgactc tgaccccttc
361 acgatgacac gtgtgtctaa aggtatgtat catcatcatg accacttttt cttccattct
421 ttgggctatg ccctcaggta atgttaattt tcactgtgcc catggtttct aatcagtgca
481 gtctcacttg ccagtactta catatttcct gaaccattga agccctgttc agaaaattgc
541 ctatgcttca tacattgaaa tgttagccaa agtaattggg caaaacanaa aaaaaaataa
601 aagccacaaa tttaaaaaaa aaaaaaagat gtaaaattga gacatttggt tgtggcagtt
661 tcaggtctca tatttaggtt tgtac
//