LOCUS BY427142 413 bp mRNA linear EST 13-DEC-2002
DEFINITION BY427142 RIKEN full-length enriched, 16 days embryo kidney Mus
musculus cDNA clone I920088I21 3', mRNA sequence.
ACCESSION BY427142
VERSION BY427142.1
DBLINK BioSample: SAMN00171876
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 413)
AUTHORS Okazaki,Y., Furuno,M., Kasukawa,T., Adachi,J., Bono,H., Kondo,S.,
Nikaido,I., Osato,N., Saito,R., Suzuki,H., Yamanaka,I.,
Kiyosawa,H., Yagi,K., Tomaru,Y., Hasegawa,Y., Nogami,A.,
Schonbach,C., Gojobori,T., Baldarelli,R., Hill,D.P., Bult,C.,
Hume,D.A., Quackenbush,J., Schriml,L.M., Kanapin,A., Matsuda,H.,
Batalov,S., Beisel,K.W., Blake,J.A., Bradt,D., Brusic,V.,
Chothia,C., Corbani,L.E., Cousins,S., Dalla,E., Dragani,T.A.,
Fletcher,C.F., Forrest,A., Frazer,K.S., Gaasterland,T.,
Gariboldi,M., Gissi,C., Godzik,A., Gough,J., Grimmond,S.,
Gustincich,S., Hirokawa,N., Jackson,I.J., Jarvis,E.D., Kanai,A.,
Kawaji,H., Kawasawa,Y., Kedzierski,R.M., King,B.L., Konagaya,A.,
Kurochkin,I.V., Lee,Y., Lenhard,B., Lyons,P.A., Maglott,D.R.,
Maltais,L., Marchionni,L., McKenzie,L., Miki,H., Nagashima,T.,
Numata,K., Okido,T., Pavan,W.J., Pertea,G., Pesole,G.,
Petrovsky,N., Pillai,R., Pontius,J.U., Qi,D., Ramachandran,S.,
Ravasi,T., Reed,J.C., Reed,D.J., Reid,J., Ring,B.Z., Ringwald,M.,
Sandelin,A., Schneider,C., Semple,C.A., Setou,M., Shimada,K.,
Sultana,R., Takenaka,Y., Taylor,M.S., Teasdale,R.D., Tomita,M.,
Verardo,R., Wagner,L., Wahlestedt,C., Wang,Y., Watanabe,Y.,
Wells,C., Wilming,L.G., Wynshaw-Boris,A., Yanagisawa,M., Yang,I.,
Yang,L., Yuan,Z., Zavolan,M., Zhu,Y., Zimmer,A., Carninci,P.,
Hayatsu,N., Hirozane-Kishikawa,T., Konno,H., Nakamura,M.,
Sakazume,N., Sato,K., Shiraki,T., Waki,K., Kawai,J., Aizawa,K.,
Arakawa,T., Fukuda,S., Hara,A., Hashizume,W., Imotani,K., Ishii,Y.,
Itoh,M., Kagawa,I., Miyazaki,A., Sakai,K., Sasaki,D., Shibata,K.,
Shinagawa,A., Yasunishi,A., Yoshino,M., Waterston,R., Lander,E.S.,
Rogers,J., Birney,E. and Hayashizaki,Y.
TITLE Analysis of the mouse transcriptome based on functional annotation
of 60,770 full-length cDNAs
JOURNAL Nature 420, 563-573 (2002)
PUBMED 12466851
COMMENT Contact: Yoshihide Hayashizaki
Omics Science Center, RIKEN Yokohama Institute
The Institute of Physical and Chemical Research (RIKEN)
1-7-22 Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan
Email: URL:http://www.osc.riken.jp/
Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S.,
Hirozane,T., Imotani,K., Ishii,Y., Itoh,M., Kawai,J., Konno,H.,
Miyazaki,A., Murata,M., Nakamura,M., Nomura,K., Numazaki,R.,
Ohno,M., Sakai,K., Sakazume,N., Sasaki,D., Sato,K., Shibata,K.,
Shiraki,T., Tagami,M., Waki,K., Watahiki,A., Muramatsu,M. and
Hayashizaki,Y. Direct Submission
Computational Analysis of Full-Length Mouse cDNAs Compared with
Human Genome Sequences Mamm. Genome. 12, 673-677 (2001)
Normalization and subtraction of cap-trapper-selected cDNAs to
prepare full-length cDNA libraries for rapid discovery of new
genes. Genome Res. 10 (10), 1617-1630 (2000)
RIKEN integrated sequence analysis (RISA) system--384-format
sequencing pipeline with 384 multicapillary sequencer. Genome Res.
10 (11), 1757-1771 (2000)
Computer-based methods for the mouse full-length cDNA
encyclopedia: real-time sequence clustering for construction of a
nonredundant cDNA library. Genome Res. 11 (2), 281-289 (2001)
cDNA library was prepared and sequenced in Mouse Genome
Encyclopedia Project of Genome Exploration Research Group in Riken
Genomic Sciences Center and Genome Science Laboratory in RIKEN.
Division of Experimental Animal Research in Riken contributed to
prepare mouse tissues.
Please visit our web site (http://genome.gsc.riken.go.jp) for
further details.
FEATURES Location/Qualifiers
source 1..413
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="taxon:10090"
/clone="I920088I21"
/tissue_type="kidney"
/clone_lib="SAMN00171876 RIKEN full-length enriched, 16
days embryo kidney"
/dev_stage="16 days embryo"
ORIGIN
1 ttaatttgag aaagttactt tcttcagtgg gaagggaaga agggaagaat cccaaaaatg
61 ttggtgcccc cgaaaactac cctcttgaag ggctttcccc ctttcccaag ttccaggatt
121 ggaagctccc ttggaaccct ttaacttttt aaatgtccca gctaagggcc ccaaagtttg
181 taagctattg tgcttgtgtt atttctgtgt ttctcattag attttgtctt actggtttct
241 ctactaagga actccttttt aaatgtgggt ttgttattgt agcccctttt accgaaggaa
301 acaaaactgg accagtatta acctgaacaa actttatgaa gctgtcctct gaattaattt
361 taatgtggaa tttcgtaccc tgtcatgtcc tgtaaataaa gattaaagtt ccc
//