LOCUS BC168929 2720 bp mRNA linear ROD 26-JUL-2016
DEFINITION Rattus norvegicus F-box protein 33, mRNA (cDNA clone
IMAGE:9032509), partial cds.
ACCESSION BC168929
VERSION BC168929.1
KEYWORDS .
SOURCE Rattus norvegicus (Norway rat)
ORGANISM Rattus norvegicus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Rattus.
REFERENCE 1 (bases 1 to 2720)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2720)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-AUG-2008) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: SAIC
cDNA Library Preparation: Express Genomics
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 341 Row: n Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi:
157820016.
FEATURES Location/Qualifiers
source 1..2720
/organism="Rattus norvegicus"
/mol_type="mRNA"
/db_xref="taxon:10116"
/clone="IMAGE:9032509"
/tissue_type="Heart, 12 day embryo, pool of 36, mixed sex,
strain BN/Mcwi"
/clone_lib="NIH_MGC_420"
/lab_host="DH10B"
/note="Vector: pExpress1"
gene <1..2720
/gene="Fbxo33"
/db_xref="GeneID:314157"
/db_xref="RGD:1307543"
CDS <1..1666
/gene="Fbxo33"
/codon_start=2
/product="Fbxo33 protein"
/protein_id="AAI68929.1"
/db_xref="GeneID:314157"
/db_xref="RGD:1307543"
/translation="PRPPGARTRAGAARVVRWRRRQRLRLRQLRRLRGLLRGLRGRSG
TSGRRRSRMALCGQAAGAASLPSELIVHIFSFLPAPDRLRASASCSHWRECLFYPALW
PQLRICLRVSPAEQPRLEFLMRKCGWFVRELRVEFAAENYLSGGGGPGDGGGSGGGTD
TGNGGEESEALQLSSRWLEVLRIYLELVLCVLLSIRNNRNLQKFSLFGDISVVQQQGS
LSSTYLSRVDPDGKKIKQIQQLFEEILSNSRQLKWLSCGFMLEIVTPSSLSSLSNSIA
NTMEHLSLLDNNIPGNSTLITAVELERFVNLRSLALDFCDFTAEMARVLTDSNHVPLQ
RLSLLVHNASVMLKSLDNMPNDEHWKALSRKSSSLRVYLMAFDVKSEDMLKILKPSIP
LERVHFDSYVTCVSGAIVDLISRQYDKFLTHFILMNDMIDTSGFPDLSDNRNEDPLVL
LAWRCTKLTLLAIHGYTVWAHNLIAIARLRGSDLKVLEVTEESIDFDQGELADQDVDP
VHNLLEQVSLGLGQSWHAVLDIESLSVFTEPNRHFYREMQSFSEDI"
ORIGIN
1 gccccgaccg ccgggagcgc gaacccgagc cggggccgcc cgggtggtgc ggtggcggcg
61 gcggcagcgg ctgcggctgc ggcagctgcg ccggctgcgg gggctgctgc gaggactgcg
121 cgggcggtcg gggacgagcg gccggcggcg gagccggatg gctctgtgcg ggcaggcggc
181 cggcgccgcg tcgctgccca gcgaactcat cgtgcacatc ttctcctttc tgccggcgcc
241 cgaccggctg cgggcctcgg cctcctgctc gcactggcgg gagtgcctct tctacccagc
301 cctgtggccc cagctccgca tctgcctccg cgtctcgcca gcggagcagc cgcggctcga
361 gtttctcatg cgcaagtgcg gctggttcgt acgggagcta cgggttgagt tcgccgcgga
421 gaattatctg agcggaggcg gcggcccggg cgacggtggc ggaagcggcg ggggcaccga
481 cacgggcaac ggaggggaag aaagtgaggc cctgcaactc tcctcccgct ggctagaagt
541 gctgcgcatc tacttggagc tggtgttgtg cgtgctgctc agcatccgga acaacaggaa
601 cctccagaag tttagtcttt ttggagatat aagtgtcgtt cagcagcaag gaagtctgtc
661 cagcacatac ctcagcagag tagaccctga cggcaagaag attaagcaaa ttcagcagct
721 gtttgaagaa atactgagca atagtaggca actaaaatgg ctgtcctgtg ggtttatgct
781 ggaaatagta accccatcat cactgtcgtc tctgtctaac tccattgcca acaccatgga
841 acacctgagt ttactggaca acaacattcc tggtaacagc acgctcatca ccgcagtcga
901 actagagcgc tttgtaaatc tgcgctcact tgccctggat ttctgtgact ttacagctga
961 gatggcgaga gtcctgaccg acagcaacca tgtgcctttg cagcgactgt ctcttctggt
1021 ccacaatgct tcagtgatgc tcaagtcatt agacaacatg ccaaacgatg agcactggaa
1081 ggccctgtca cgaaagagct ccagcctccg ggtctatcta atggcttttg atgttaaaag
1141 tgaagacatg ctaaagattc tgaaacccag tataccactt gagagggttc actttgacag
1201 ctacgtcact tgtgtctcag gggctattgt tgatcttata tccaggcagt atgacaagtt
1261 cctcacccat tttatattga tgaatgatat gattgatacg tctggttttc cggatcttag
1321 tgacaaccga aatgaagatc cattggtttt attggcatgg cggtgcacaa agctcactct
1381 tttggcaatt catggttaca ccgtgtgggc acacaacctc attgccattg ctcgtcttcg
1441 tggctctgac ctaaaagtgc ttgaagtcac cgaagaaagc attgattttg accaaggtga
1501 actagccgac caggatgtgg atcccgtaca taaccttctt gagcaggtat ccctgggcct
1561 tggtcagtct tggcacgcag tcttggacat cgaatcactc agtgtcttca ctgaaccaaa
1621 tcgtcatttt tacagagaga tgcaaagctt cagcgaagac atttagcttt tttaaaatgt
1681 ataattcctg tggctacata tgcaagtagg gtcccattat gtttttttca ttagtggaaa
1741 ctaatccttt tgtgctgtgt ttaatcagta ttagctttat agaattataa atgtatattc
1801 tacttcttga tcaaagaacg tagtcgggta ttggttttag aagttcaaag tgacactgta
1861 tagggctttc acggttaatg ggattgttag caaatcttaa ggacatacag ccaatgatta
1921 tctgaggtta ctggctaact gtttttcact gagttactct gcctttttga catttttatt
1981 ctttgtttgt cagaatccag agctcaggag ccaaatattt ttatacgtat atatatatat
2041 atataaatat ccataagcct ggtggatttg tatgcaatgc actgcatcta tgtattctga
2101 tagcatctca ttgatttttg tttgaaatag aaagaaagat agtatcccaa atgagttatc
2161 tttaacagaa agctgagttt aacttttatt acctatataa taattgatat tgccaattac
2221 cattctgaat ttcatatagt ataagttaga cattgcttaa tcccctttta aatgtattta
2281 catagacatg aacactcaaa ttgctggatt ttttaaatat atctgacata atttttttca
2341 tctgttacat tcaagttagc ttgtttagcc cagatttcag aatagtaaag gaggaaagga
2401 accgcattcc agggaaacct ctgaggccaa gtcagagtcc agaactgtaa acgcacaggc
2461 ctgcaagcca acattagtcg tgaaatccct aacacgtcac tggattctct ctgtcagcgc
2521 aagtgtcagc tgccaaagaa tagacttaca tgaagaagtg cccacatgct ggcaggggct
2581 ggccggctcc ggccagcaga cactgctaga ttgtaatatt taaggtcgag tttcgacctg
2641 tggtacacag ctgtgctgtg ctcagtcagc aacctcagaa ctctgaaaaa aacataaaaa
2701 aaaaaaaaaa aaaaaaaaaa
//