LOCUS BC079127 1879 bp mRNA linear ROD 15-JUL-2006
DEFINITION Rattus norvegicus transmembrane protein 106B, mRNA (cDNA clone
MGC:94135 IMAGE:7127112), complete cds.
ACCESSION BC079127
VERSION BC079127.1
KEYWORDS MGC.
SOURCE Rattus norvegicus (Norway rat)
ORGANISM Rattus norvegicus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Rattus.
REFERENCE 1 (bases 1 to 1879)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1879)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-AUG-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Howard Jacobs
cDNA Library Preparation: Express Genomics
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 183 Row: o Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 51948501.
FEATURES Location/Qualifiers
source 1..1879
/organism="Rattus norvegicus"
/mol_type="mRNA"
/db_xref="taxon:10116"
/clone="MGC:94135 IMAGE:7127112"
/tissue_type="Kidney, rat (Brown Norway)"
/clone_lib="NIH_MGC_236"
/lab_host="DH10B"
/note="Vector: pExpress1"
gene 1..1879
/gene="Tmem106b"
/gene_synonym="MGC94135"
/db_xref="GeneID:312132"
/db_xref="RGD:1303037"
CDS 122..949
/gene="Tmem106b"
/gene_synonym="MGC94135"
/codon_start=1
/product="transmembrane protein 106B"
/protein_id="AAH79127.1"
/db_xref="GeneID:312132"
/db_xref="RGD:1303037"
/translation="MGKSLSHLPLHSNKEDGYDGVTSTDNMRNGLVSSEVRNEDGRSG
DVSQFPYVEFTGRDSVTCPTCQGTGRIPRGQENQLVALIPYSDQRLRPRRTKLYVMAS
VFVCLLLSGLAVFFLFPRSIDVKYIGVKSAYVSYDSQKRMIYLNITNTLNITNNNYYS
VEVENITAQVQFSKTVIGKARLSNITNIGPLDMKQIDYTVPTVIAEEMSYMYDFCTLP
SIKVHNIVLMMQVTVTTAYFGHSEQISQERYQYVDCGRNTTYQLAQSEYLNVLQPQQ"
ORIGIN
1 cgcagcactc cgcgtgcgga gcatctgaga accgtgttga gttcacagga ccgcgacata
61 aacattgaga gcctggggag gaaacgaagg ggatctagca ttccttttaa aaacctcaaa
121 catgggaaag tctctttctc atttaccttt gcattccaat aaagaagatg gctatgatgg
181 ggtcacatca acagacaata tgaggaatgg attggttagc agtgaggtgc gtaacgaaga
241 cggaagaagt ggagacgtct ctcagtttcc atacgtggag tttactggaa gagatagtgt
301 cacttgtccc acttgtcaag ggacaggaag aatccctagg gggcaagaaa accaactggt
361 ggcattgatt ccatatagtg atcaacggtt acgaccaaga agaacaaagc tgtatgtgat
421 ggcatctgtg tttgtctgcc tgctcctgtc tggattggct gtgttttttc ttttccctcg
481 atctattgac gtgaagtaca ttggtgtaaa atcagcctat gttagttacg actctcaaaa
541 gcgaatgata tatttaaaca tcacgaacac actaaatata acaaataata actattattc
601 tgttgaagtt gaaaacatca ctgctcaagt tcagttttca aaaacagtga ttgggaaggc
661 acggttaagc aacataacta acattggccc acttgatatg aagcagattg attatacggt
721 acccacagtt attgccgagg aaatgagcta catgtatgat ttctgtacac tgccctccat
781 caaagtacac aacatagtac tcatgatgca agttactgta acaacagcat actttggaca
841 ctctgagcag atatctcagg agaggtacca gtatgttgac tgtggaagga acacgactta
901 ccagttggcc cagtctgagt atctaaatgt ccttcagcca caacaataaa ctctaaagga
961 gatgtggtta gacccagcac cacacctgag acatggtcag agctgtcagt gaggaggtac
1021 tgcctctaag gacatcttta attgagcatg tctaaagttt acactgggat gttggcgatc
1081 cagctaacag aatttggtcc ttatgcagtt cctggactct gttttctgtg ttgacgattt
1141 gctcccacca cgagcttttc ctccatccaa tgttaactga ttggctttct tctcaccttt
1201 gttcccaagg tgaaaaattg agacttcctt agaatacaat aaatgattat ataaaagtca
1261 tagatttaat ctatatatct attgataata tagttcaatc ctgaacataa tttgaaaaat
1321 aacttctgaa gatttttata tattactgaa agcctattat tcatggagaa cttttaaaaa
1381 ctgacctgtt ttataaattc ccattcttac atagtaaact ttcaactata tgaataactt
1441 agctattagc taaatgtttt tagcctttaa tttcttcaaa ttctacaggt ttgcatgttt
1501 cgtcttattt ctagctaatg gttgcataat attcaccaac cataacagtc tgccaaattc
1561 tgtcctacat tttataagaa cctctcagta tgtgtttcat gtatagcttt gtgaacttcc
1621 tgtgtgatct tcaaacactt taatgtacaa tattgtaaat aaactgcatg gcttttatac
1681 agctttgata aatgtcaaat gaagtggtac agattaagaa gtaaagcaag ttgctcataa
1741 aaaataaagt aggaaaatga aattcagaaa cctatgaagt atcagtaggt tccagctaca
1801 tgttggatct ggcataaaat agatgcacaa taaaacactt tgctgctctc tctaaaaaaa
1861 aaaaaaaaaa aaaaaaaaa
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