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Rattus norvegicus transmembrane protein 106B, mRNA (cDNA clone MGC:94135 IMAGE:7127112), complete cds

GenBank: BC079127.1

FASTA Graphics 

LOCUS       BC079127                1879 bp    mRNA    linear   ROD 15-JUL-2006
DEFINITION  Rattus norvegicus transmembrane protein 106B, mRNA (cDNA clone
            MGC:94135 IMAGE:7127112), complete cds.
ACCESSION   BC079127
VERSION     BC079127.1
KEYWORDS    MGC.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1879)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1879)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-AUG-2004) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Howard Jacobs
            cDNA Library Preparation: Express Genomics
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 183 Row: o Column: 7
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 51948501.
FEATURES             Location/Qualifiers
     source          1..1879
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /clone="MGC:94135 IMAGE:7127112"
                     /tissue_type="Kidney, rat (Brown Norway)"
                     /clone_lib="NIH_MGC_236"
                     /lab_host="DH10B"
                     /note="Vector: pExpress1"
     gene            1..1879
                     /gene="Tmem106b"
                     /gene_synonym="MGC94135"
                     /db_xref="GeneID:312132"
                     /db_xref="RGD:1303037"
     CDS             122..949
                     /gene="Tmem106b"
                     /gene_synonym="MGC94135"
                     /codon_start=1
                     /product="transmembrane protein 106B"
                     /protein_id="AAH79127.1"
                     /db_xref="GeneID:312132"
                     /db_xref="RGD:1303037"
                     /translation="MGKSLSHLPLHSNKEDGYDGVTSTDNMRNGLVSSEVRNEDGRSG
                     DVSQFPYVEFTGRDSVTCPTCQGTGRIPRGQENQLVALIPYSDQRLRPRRTKLYVMAS
                     VFVCLLLSGLAVFFLFPRSIDVKYIGVKSAYVSYDSQKRMIYLNITNTLNITNNNYYS
                     VEVENITAQVQFSKTVIGKARLSNITNIGPLDMKQIDYTVPTVIAEEMSYMYDFCTLP
                     SIKVHNIVLMMQVTVTTAYFGHSEQISQERYQYVDCGRNTTYQLAQSEYLNVLQPQQ"
ORIGIN      
        1 cgcagcactc cgcgtgcgga gcatctgaga accgtgttga gttcacagga ccgcgacata
       61 aacattgaga gcctggggag gaaacgaagg ggatctagca ttccttttaa aaacctcaaa
      121 catgggaaag tctctttctc atttaccttt gcattccaat aaagaagatg gctatgatgg
      181 ggtcacatca acagacaata tgaggaatgg attggttagc agtgaggtgc gtaacgaaga
      241 cggaagaagt ggagacgtct ctcagtttcc atacgtggag tttactggaa gagatagtgt
      301 cacttgtccc acttgtcaag ggacaggaag aatccctagg gggcaagaaa accaactggt
      361 ggcattgatt ccatatagtg atcaacggtt acgaccaaga agaacaaagc tgtatgtgat
      421 ggcatctgtg tttgtctgcc tgctcctgtc tggattggct gtgttttttc ttttccctcg
      481 atctattgac gtgaagtaca ttggtgtaaa atcagcctat gttagttacg actctcaaaa
      541 gcgaatgata tatttaaaca tcacgaacac actaaatata acaaataata actattattc
      601 tgttgaagtt gaaaacatca ctgctcaagt tcagttttca aaaacagtga ttgggaaggc
      661 acggttaagc aacataacta acattggccc acttgatatg aagcagattg attatacggt
      721 acccacagtt attgccgagg aaatgagcta catgtatgat ttctgtacac tgccctccat
      781 caaagtacac aacatagtac tcatgatgca agttactgta acaacagcat actttggaca
      841 ctctgagcag atatctcagg agaggtacca gtatgttgac tgtggaagga acacgactta
      901 ccagttggcc cagtctgagt atctaaatgt ccttcagcca caacaataaa ctctaaagga
      961 gatgtggtta gacccagcac cacacctgag acatggtcag agctgtcagt gaggaggtac
     1021 tgcctctaag gacatcttta attgagcatg tctaaagttt acactgggat gttggcgatc
     1081 cagctaacag aatttggtcc ttatgcagtt cctggactct gttttctgtg ttgacgattt
     1141 gctcccacca cgagcttttc ctccatccaa tgttaactga ttggctttct tctcaccttt
     1201 gttcccaagg tgaaaaattg agacttcctt agaatacaat aaatgattat ataaaagtca
     1261 tagatttaat ctatatatct attgataata tagttcaatc ctgaacataa tttgaaaaat
     1321 aacttctgaa gatttttata tattactgaa agcctattat tcatggagaa cttttaaaaa
     1381 ctgacctgtt ttataaattc ccattcttac atagtaaact ttcaactata tgaataactt
     1441 agctattagc taaatgtttt tagcctttaa tttcttcaaa ttctacaggt ttgcatgttt
     1501 cgtcttattt ctagctaatg gttgcataat attcaccaac cataacagtc tgccaaattc
     1561 tgtcctacat tttataagaa cctctcagta tgtgtttcat gtatagcttt gtgaacttcc
     1621 tgtgtgatct tcaaacactt taatgtacaa tattgtaaat aaactgcatg gcttttatac
     1681 agctttgata aatgtcaaat gaagtggtac agattaagaa gtaaagcaag ttgctcataa
     1741 aaaataaagt aggaaaatga aattcagaaa cctatgaagt atcagtaggt tccagctaca
     1801 tgttggatct ggcataaaat agatgcacaa taaaacactt tgctgctctc tctaaaaaaa
     1861 aaaaaaaaaa aaaaaaaaa
//
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