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Arabidopsis thaliana AT5g52970/MNB8_3 mRNA, complete cds

GenBank: AY048216.1

FASTA Graphics 

LOCUS       AY048216                 891 bp    mRNA    linear   PLN 05-AUG-2001
DEFINITION  Arabidopsis thaliana AT5g52970/MNB8_3 mRNA, complete cds.
ACCESSION   AY048216
VERSION     AY048216.1
KEYWORDS    FLI_CDNA.
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 891)
  AUTHORS   Koesema,E., Chen,H., Cheuk,R., Kim,C.J., Meyers,M.C., Shinn,P.,
            Banh,J., Bowser,L., Carninci,P., Dale,J.M., Gibson,H.A.,
            Goldsmith,A.D., Hayashizaki,Y., Ishida,J., Jiang,P.X., Jones,T.,
            Kamiya,A., Karlin-Neumann,G., Kawai,J., Lam,B., Lee,J.M., Lin,J.,
            Liu,S.X., Miranda,M., Narusaka,M., Nguyen,M., Onodera,C.S.,
            Palm,C.J., Pham,P.K., Quach,H.L., Sakurai,T., Satou,M., Seki,M.,
            Southwick,A., Tang,C.C., Toriumi,M., Yamada,K., Yu,G., Yu,S.,
            Shinozaki,K., Davis,R.W., Theologis,A. and Ecker,J.R.
  TITLE     Arabidopsis cDNA clones
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 891)
  AUTHORS   Koesema,E., Chen,H., Cheuk,R., Kim,C.J., Meyers,M.C., Shinn,P.,
            Banh,J., Bowser,L., Carninci,P., Dale,J.M., Gibson,H.A.,
            Goldsmith,A.D., Hayashizaki,Y., Ishida,J., Jiang,P.X., Jones,T.,
            Kamiya,A., Karlin-Neumann,G., Kawai,J., Lam,B., Lee,J.M., Lin,J.,
            Liu,S.X., Miranda,M., Narusaka,M., Nguyen,M., Onodera,C.S.,
            Palm,C.J., Pham,P.K., Quach,H.L., Sakurai,T., Satou,M., Seki,M.,
            Southwick,A., Tang,C.C., Toriumi,M., Yamada,K., Yu,G., Yu,S.,
            Shinozaki,K., Davis,R.W., Theologis,A. and Ecker,J.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-JUL-2001) Salk Institute Genomic Analysis Laboratory
            (SIGnAL), Plant Biology Laboratory, The Salk Institute for
            Biological Studies, 10010 N. Torrey Pines Road, La Jolla, CA 92037,
            USA
COMMENT     RIKEN Genomic Sciences Center (GSC) members carried out the
            collection and clustering of RAFL cDNAs (RAFL cDNA : 'RIKEN
            Arabidopsis Full-Length cDNA') :  Seki,M., Narusaka,M., Ishida,J.,
            Satou,M., Kamiya,A., Sakurai,T., Carninci,P.,  Kawai,J.,
            Hayashizaki,Y. and Shinozaki,K.
            
            The Salk, Stanford, PGEC (SSP) Consortium members carried out the
            sequencing and annotation of the RAFL cDNAs: Koesema,E., Chen,H.,
            Cheuk,R., Kim,C.J., Meyers,M.C., Shinn, P., Banh,J. Bowser,L.,
            Dale,J.M., Goldsmith,A.D., Jiang,P.X., Jones,T., Karlin-Neumann,G.,
            Lam,B., Lee,J.M., Lin,J., Liu,S.X., Miranda,M., Nguyen,M.,
            Onodera,C.S., Palm,C.J., Pham,P.K., Quach,H.L., Southwick,A.,
            Tang,C.C., Toriumi,M., Yamada,K., Yamamura, Y., Yu,G., Yu,S.,
            Davis,R.W., Theologis,A., and Ecker,J.R.
            
            Koesema,E. (SSP/Salk) and Seki,M. (RIKEN GSC) contributed equally
            to this work.  Shinozaki,K. (RIKEN GSC) and Ecker,J.R. (SSP/Salk)
            contributed equally to this work as PIs.
FEATURES             Location/Qualifiers
     source          1..891
                     /organism="Arabidopsis thaliana"
                     /mol_type="mRNA"
                     /db_xref="taxon:3702"
                     /chromosome="5"
                     /clone="RAFL05-15-N23(R13051)"
                     /ecotype="Columbia"
     5'UTR           1..11
     CDS             12..683
                     /note="unknown protein"
                     /codon_start=1
                     /product="AT5g52970/MNB8_3"
                     /protein_id="AAK82479.1"
                     /translation="MAMLFRPPPSQCRSFSPFVFNYSSREVSSSSRLSLKTSGDEENW
                     VSRFRSKSLSLVFSGALALGLSLSGVGFADAKVGVNKPELLPKEFTSVIDVADFLSNG
                     QEKRIAQEIANLEKDTGFKLRVLAQNYPVTPGLAIKDFWQVDDSTIVFVADPTFGNIL
                     NFNVGATVDLDIPRSFWSRLAGKYGNMFYWKEKGEDASIEAAVMAISSCLREPVGRNN
                     CAEIQ"
     3'UTR           684..891
ORIGIN      
        1 aacgaagagt catggcgatg ctttttcgac ctcctccttc acaatgtaga agcttctctc
       61 cttttgtctt caactacagc tccagagaag tttcttcgtc gtctcgtctc tccttgaaaa
      121 cctccggcga cgaagaaaac tgggtttcac gtttccggtc gaaatctctc agtttggtgt
      181 tctctggagc tcttgctctc ggtttatctc tatcaggcgt ggggtttgca gatgcaaaag
      241 ttggtgttaa caaaccagaa ttgcttccta aagagttcac ttctgttata gatgttgctg
      301 atttcctctc taatggtcag gagaagagaa ttgctcaaga aatcgctaat cttgagaaag
      361 atacaggatt caagttgaga gtcttggctc aaaactatcc cgttacccct ggactagcaa
      421 tcaaagattt ctggcaggtg gatgatagca caattgtgtt tgtcgctgac ccgacttttg
      481 ggaacatatt gaatttcaat gttggagcta cggttgattt agacatacct cgtagtttct
      541 ggagtcgact ggctgggaaa tacggcaata tgttttactg gaaagagaag ggagaagatg
      601 catctattga agctgcagtg atggcgatat caagttgctt acgagaacca gttggtcgaa
      661 acaactgtgc agagatccaa tgaagtatat gaccccatca agcgtatatg ttattatcat
      721 aatatcattg tatagattgg caccaaagag atacagaatt tgtaagaatg aatccacgtc
      781 tagtagtaac ctctctccat ttctcagctt cacctactca aacaaacagt ttcaattggt
      841 tacttgtatc ttttaaaaca aacaaataga gaaaccaaaa tcaataaacc g
//
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