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Arabidopsis thaliana AT5g26000/T1N24_7 mRNA, complete cds

GenBank: AY045681.1

FASTA Graphics 

LOCUS       AY045681                1803 bp    mRNA    linear   PLN 24-JUL-2001
DEFINITION  Arabidopsis thaliana AT5g26000/T1N24_7 mRNA, complete cds.
ACCESSION   AY045681
VERSION     AY045681.1
KEYWORDS    FLI_CDNA.
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 1803)
  AUTHORS   Kim,C.J., Chen,H., Cheuk,R., Koesema,E., Meyers,M.C., Banh,J.,
            Bowser,L., Carninci,P., Dale,J.M., Gibson,H.A., Goldsmith,A.D.,
            Hayashizaki,Y., Ishida,J., Jiang,P.X., Jones,T., Kamiya,A.,
            Karlin-Neumann,G., Kawai,J., Lam,B., Lee,J.M., Lin,J., Liu,S.X.,
            Miranda,M., Narusaka,M., Nguyen,M., Onodera,C.S., Palm,C.J.,
            Pham,P.K., Quach,H.L., Sakurai,T., Satou,M., Seki,M., Southwick,A.,
            Tang,C.C., Toriumi,M., Yamada,K., Yu,G., Yu,S., Shinozaki,K.,
            Davis,R.W., Theologis,A. and Ecker,J.R.
  TITLE     Arabidopsis cDNA clones
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1803)
  AUTHORS   Kim,C.J., Chen,H., Cheuk,R., Koesema,E., Meyers,M.C., Banh,J.,
            Bowser,L., Carninci,P., Dale,J.M., Gibson,H.A., Goldsmith,A.D.,
            Hayashizaki,Y., Ishida,J., Jiang,P.X., Jones,T., Kamiya,A.,
            Karlin-Neumann,G., Kawai,J., Lam,B., Lee,J.M., Lin,J., Liu,S.X.,
            Miranda,M., Narusaka,M., Nguyen,M., Onodera,C.S., Palm,C.J.,
            Pham,P.K., Quach,H.L., Sakurai,T., Satou,M., Seki,M., Southwick,A.,
            Tang,C.C., Toriumi,M., Yamada,K., Yu,G., Yu,S., Shinozaki,K.,
            Davis,R.W., Theologis,A. and Ecker,J.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-JUL-2001) Salk Institute Genomic Analysis Laboratory
            (SIGnAL), Plant Biology Laboratory, The Salk Institute for
            Biological Studies, 10010 N. Torrey Pines Road, La Jolla, CA 92037,
            USA
COMMENT     RIKEN Genomic Sciences Center (GSC) members carried out the
            collection and clustering of RAFL cDNAs (RAFL cDNA : 'RIKEN
            Arabidopsis Full-Length cDNA') :  Seki,M., Narusaka,M., Ishida,J.,
            Satou,M., Kamiya,A., Sakurai,T., Carninci,P.,  Kawai,J.,
            Hayashizaki,Y. and Shinozaki,K.
            
            The Salk, Stanford, PGEC (SSP) Consortium members carried out the
            sequencing and annotation of the RAFL cDNAs: Kim,C.J., Chen,H.,
            Cheuk,R., Koesema,E., Meyers,M.C., Shinn,P., Banh,J. Bowser,L.,
            Dale,J.M., Gibson,H.A., Goldsmith,A.D., Jiang,P.X., Jones,T.,
            Karlin-Neumann,G., Lam,B., Lee,J.M., Lin,J., Liu,S.X., Miranda,M.,
            Nguyen,M., Onodera,C.S., Palm,C.J., Pham,P.K., Quach,H.L.,
            Southwick,A., Tang,C.C., Toriumi,M., Yamada,K., Yu,G., Yu,S.,
            Davis,R.W.,  Theologis,A., and Ecker,J.R.
            
            Kim,C.J. (SSP/Salk) and Seki,M. (RIKEN GSC) contributed equally to
            this work.  Shinozaki,K. (RIKEN GSC) and Ecker,J.R. (SSP/Salk)
            contributed equally to this work as PIs.
FEATURES             Location/Qualifiers
     source          1..1803
                     /organism="Arabidopsis thaliana"
                     /mol_type="mRNA"
                     /db_xref="taxon:3702"
                     /chromosome="5"
                     /clone="RAFL03-01-G05(R13011)"
                     /ecotype="Columbia"
     5'UTR           1..31
     CDS             32..1657
                     /note="myrosinase precursor"
                     /codon_start=1
                     /product="AT5g26000/T1N24_7"
                     /protein_id="AAK74039.1"
                     /translation="MKLLMLAFVFLLALATCKGDEFVCEENEPFTCNQTKLFNSGNFE
                     KGFIFGVASSAYQVEGGRGRGLNVWDSFTHRFPEKGGADLGNGDTTCDSYTLWQKDID
                     VMDELNSTGYRFSIAWSRLLPKGKRSRGVNPGAIKYYNGLIDGLVAKNMTPFVTLFHW
                     DLPQTLQDEYNGFLNKTIVDDFKDYADLCFELFGDRVKNWITINQLYTVPTRGYALGT
                     DAPGRCSPKIDVRCPGGNSSTEPYIVAHNQLLAHAAAVDVYRTKYKDDQKGMIGPVMI
                     TRWFLPFDHSQESKDATERAKIFFHGWFMGPLTEGKYPDIMREYVGDRLPEFSETEAA
                     LVKGSYDFLGLNYYVTQYAQNNQTIVPSDVHTALMDSRTTLTSKNATGHAPGPPFNAA
                     SYYYPKGIYYVMDYFKTTYGDPLIYVTENGFSTPGDEDFEKATADYKRIDYLCSHLCF
                     LSKVIKEKNVNVKGYFAWSLGDNYEFCNGFTVRFGLSYVDFANITGDRDLKASGKWFQ
                     KFINVTDEDSTNQDLLRSSVSSKNRDRKSLADA"
     3'UTR           1658..1803
ORIGIN      
        1 aacacaaaaa catacacact actaataaac catgaagctt cttatgctcg cctttgtttt
       61 tctattagct ttggcgactt gtaaaggtga cgagtttgtt tgtgaagaga acgagccatt
      121 cacatgtaac caaactaaac ttttcaacag tggcaatttc gaaaaaggct tcatcttcgg
      181 tgttgcatct tctgcttacc aggtggaagg cggtagaggc cgtggactta acgtttggga
      241 tagcttcact caccgattcc cagagaaagg tggagctgat ttgggaaatg gagacactac
      301 ttgtgactca tatactcttt ggcagaaaga tatagacgtg atggacgagc tcaactctac
      361 tggctacaga ttctccattg cgtggtcaag actccttcca aaaggaaaga ggagcagggg
      421 agtgaaccca ggagctatta agtactacaa cggtctcata gatggcctcg tcgcaaagaa
      481 tatgacgccc tttgttaccc tctttcattg ggaccttcct caaacactac aagatgaata
      541 taacggtttc ttgaacaaaa cgatcgtaga cgatttcaag gattacgcgg atctatgttt
      601 cgagttattt ggtgataggg taaagaactg gatcaccatc aaccagctat acacagtgcc
      661 tactagagga tatgcattgg gaacagatgc acccggtcga tgttctccta agattgacgt
      721 tagatgtccc ggcggaaatt cgtcaacaga accctatatt gttgcacata accagcttct
      781 tgctcatgca gcggccgttg atgtttacag gacgaaatat aaggatgacc aaaaaggtat
      841 gattggacca gtgatgataa ctagatggtt tcttccattt gatcatagtc aagagagcaa
      901 agatgcaact gagcgggcta aaatattttt ccatggatgg ttcatggggc ctctaacaga
      961 aggtaaatac ccagacatca tgagggaata tgttggtgat cggcttccag agttcagtga
     1021 aacagaagcc gcacttgtaa agggttcata tgattttctt ggtctcaact attacgtcac
     1081 tcaatacgcc caaaataatc agacgattgt tccttcggac gtacacactg ccttgatgga
     1141 ctcacgcaca actctcacat ctaaaaatgc aactggtcat gctcctggtc caccgttcaa
     1201 tgcagccagt tactactacc caaaaggcat ttactacgta atggattact tcaaaaccac
     1261 ttacggtgac cctttaatat atgtcactga gaatggattt agtaccccag gtgatgagga
     1321 ctttgagaag gctactgccg attacaagcg gattgattat ctctgtagtc atctctgttt
     1381 cctcagtaaa gtcatcaagg agaagaatgt caacgtgaaa ggatattttg cttggtctct
     1441 tggggataat tacgaattct gtaacggatt taccgtcaga ttcggactaa gttacgttga
     1501 tttcgcaaat atcactggtg atagagacct caaagcatct ggcaaatggt tccagaagtt
     1561 cataaacgtt accgacgaag actctacgaa ccaagatcta ctccgctcaa gcgtctcctc
     1621 caagaaccgt gatcggaaga gtcttgcaga tgcatgaaat atccaatcca ctatatgtcc
     1681 accaagatca tcttcatgtt tcctctttct acttgctcca tagataagga gctttttcta
     1741 ccatatgtat taaaataaaa tcctaataaa agatgatcaa taataataaa gactttgttt
     1801 act
//
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