LOCUS BY336999 339 bp mRNA linear EST 11-DEC-2002
DEFINITION BY336999 RIKEN full-length enriched, whole joints Mus musculus cDNA
clone L230004K10 5', mRNA sequence.
ACCESSION BY336999
VERSION BY336999.1
DBLINK BioSample: SAMN00171926
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 339)
AUTHORS Okazaki,Y., Furuno,M., Kasukawa,T., Adachi,J., Bono,H., Kondo,S.,
Nikaido,I., Osato,N., Saito,R., Suzuki,H., Yamanaka,I.,
Kiyosawa,H., Yagi,K., Tomaru,Y., Hasegawa,Y., Nogami,A.,
Schonbach,C., Gojobori,T., Baldarelli,R., Hill,D.P., Bult,C.,
Hume,D.A., Quackenbush,J., Schriml,L.M., Kanapin,A., Matsuda,H.,
Batalov,S., Beisel,K.W., Blake,J.A., Bradt,D., Brusic,V.,
Chothia,C., Corbani,L.E., Cousins,S., Dalla,E., Dragani,T.A.,
Fletcher,C.F., Forrest,A., Frazer,K.S., Gaasterland,T.,
Gariboldi,M., Gissi,C., Godzik,A., Gough,J., Grimmond,S.,
Gustincich,S., Hirokawa,N., Jackson,I.J., Jarvis,E.D., Kanai,A.,
Kawaji,H., Kawasawa,Y., Kedzierski,R.M., King,B.L., Konagaya,A.,
Kurochkin,I.V., Lee,Y., Lenhard,B., Lyons,P.A., Maglott,D.R.,
Maltais,L., Marchionni,L., McKenzie,L., Miki,H., Nagashima,T.,
Numata,K., Okido,T., Pavan,W.J., Pertea,G., Pesole,G.,
Petrovsky,N., Pillai,R., Pontius,J.U., Qi,D., Ramachandran,S.,
Ravasi,T., Reed,J.C., Reed,D.J., Reid,J., Ring,B.Z., Ringwald,M.,
Sandelin,A., Schneider,C., Semple,C.A., Setou,M., Shimada,K.,
Sultana,R., Takenaka,Y., Taylor,M.S., Teasdale,R.D., Tomita,M.,
Verardo,R., Wagner,L., Wahlestedt,C., Wang,Y., Watanabe,Y.,
Wells,C., Wilming,L.G., Wynshaw-Boris,A., Yanagisawa,M., Yang,I.,
Yang,L., Yuan,Z., Zavolan,M., Zhu,Y., Zimmer,A., Carninci,P.,
Hayatsu,N., Hirozane-Kishikawa,T., Konno,H., Nakamura,M.,
Sakazume,N., Sato,K., Shiraki,T., Waki,K., Kawai,J., Aizawa,K.,
Arakawa,T., Fukuda,S., Hara,A., Hashizume,W., Imotani,K., Ishii,Y.,
Itoh,M., Kagawa,I., Miyazaki,A., Sakai,K., Sasaki,D., Shibata,K.,
Shinagawa,A., Yasunishi,A., Yoshino,M., Waterston,R., Lander,E.S.,
Rogers,J., Birney,E. and Hayashizaki,Y.
TITLE Analysis of the mouse transcriptome based on functional annotation
of 60,770 full-length cDNAs
JOURNAL Nature 420, 563-573 (2002)
PUBMED 12466851
COMMENT Contact: Yoshihide Hayashizaki
Omics Science Center, RIKEN Yokohama Institute
The Institute of Physical and Chemical Research (RIKEN)
1-7-22 Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan
Email: URL:http://www.osc.riken.jp/
Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S.,
Hirozane,T., Imotani,K., Ishii,Y., Itoh,M., Kawai,J., Konno,H.,
Miyazaki,A., Murata,M., Nakamura,M., Nomura,K., Numazaki,R.,
Ohno,M., Sakai,K., Sakazume,N., Sasaki,D., Sato,K., Shibata,K.,
Shiraki,T., Tagami,M., Waki,K., Watahiki,A., Muramatsu,M. and
Hayashizaki,Y. Direct Submission
Computational Analysis of Full-Length Mouse cDNAs Compared with
Human Genome Sequences Mamm. Genome. 12, 673-677 (2001)
Normalization and subtraction of cap-trapper-selected cDNAs to
prepare full-length cDNA libraries for rapid discovery of new
genes. Genome Res. 10 (10), 1617-1630 (2000)
RIKEN integrated sequence analysis (RISA) system--384-format
sequencing pipeline with 384 multicapillary sequencer. Genome Res.
10 (11), 1757-1771 (2000)
Computer-based methods for the mouse full-length cDNA
encyclopedia: real-time sequence clustering for construction of a
nonredundant cDNA library. Genome Res. 11 (2), 281-289 (2001)
cDNA library was prepared and sequenced in Mouse Genome
Encyclopedia Project of Genome Exploration Research Group in Riken
Genomic Sciences Center and Genome Science Laboratory in RIKEN.
Division of Experimental Animal Research in Riken contributed to
prepare mouse tissues.
Tissues were provided by Vassilis Aidinis ( Biomedical Sciences
Research Center 'Al. Fleming' Institute of Immunology 14-16 Al.
Fleming street 16672 Vari,Greece ) whose assistance we gratefully
acknowledge.
Please visit our web site (http://genome.gsc.riken.go.jp) for
further details.
FEATURES Location/Qualifiers
source 1..339
/organism="Mus musculus"
/mol_type="mRNA"
/db_xref="taxon:10090"
/clone="L230004K10"
/tissue_type="whole joints"
/clone_lib="SAMN00171926 RIKEN full-length enriched, whole
joints"
ORIGIN
1 ggcgtcactt cccccgcgac ttcctcggcc gaacatggca gcgctgagca atgtccgctg
61 gctgacccga gcggtgctcg ccgctcggaa ctccggggca tggagaggtc tcggaacatc
121 tacggctcac gccgcttccc agagccaggc acaagatgtg agggtggagg gtgcctttcc
181 tgtgaccatg ctgcctggag acggcgtggg gccagagctc atgcatgctg tcaaggaagt
241 gttcaaggct gctgctgtcc ctgtggaatt taaggagcat catctgagcg aggtgcagaa
301 tatggcttct gaggagaagc tggagcaggt gctgacttc
//