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Arabidopsis thaliana Serine/Threonine-kinase ULK4-like protein (AT1G33940), partial mRNA

NCBI Reference Sequence: NM_001160919.1

FASTA Graphics 

LOCUS       NM_001160919            1629 bp    mRNA    linear   PLN 20-OCT-2022
DEFINITION  Arabidopsis thaliana Serine/Threonine-kinase ULK4-like protein
            (AT1G33940), partial mRNA.
ACCESSION   NM_001160919
VERSION     NM_001160919.1
DBLINK      BioProject: PRJNA116
            BioSample: SAMN03081427
KEYWORDS    RefSeq.
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 1629)
  AUTHORS   Theologis,A., Ecker,J.R., Palm,C.J., Federspiel,N.A., Kaul,S.,
            White,O., Alonso,J., Altafi,H., Araujo,R., Bowman,C.L.,
            Brooks,S.Y., Buehler,E., Chan,A., Chao,Q., Chen,H., Cheuk,R.F.,
            Chin,C.W., Chung,M.K., Conn,L., Conway,A.B., Conway,A.R.,
            Creasy,T.H., Dewar,K., Dunn,P., Etgu,P., Feldblyum,T.V., Feng,J.,
            Fong,B., Fujii,C.Y., Gill,J.E., Goldsmith,A.D., Haas,B.,
            Hansen,N.F., Hughes,B., Huizar,L., Hunter,J.L., Jenkins,J.,
            Johnson-Hopson,C., Khan,S., Khaykin,E., Kim,C.J., Koo,H.L.,
            Kremenetskaia,I., Kurtz,D.B., Kwan,A., Lam,B., Langin-Hooper,S.,
            Lee,A., Lee,J.M., Lenz,C.A., Li,J.H., Li,Y., Lin,X., Liu,S.X.,
            Liu,Z.A., Luros,J.S., Maiti,R., Marziali,A., Militscher,J.,
            Miranda,M., Nguyen,M., Nierman,W.C., Osborne,B.I., Pai,G.,
            Peterson,J., Pham,P.K., Rizzo,M., Rooney,T., Rowley,D., Sakano,H.,
            Salzberg,S.L., Schwartz,J.R., Shinn,P., Southwick,A.M., Sun,H.,
            Tallon,L.J., Tambunga,G., Toriumi,M.J., Town,C.D., Utterback,T.,
            Van Aken,S., Vaysberg,M., Vysotskaia,V.S., Walker,M., Wu,D., Yu,G.,
            Fraser,C.M., Venter,J.C. and Davis,R.W.
  TITLE     Sequence and analysis of chromosome 1 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 408 (6814), 816-820 (2000)
   PUBMED   11130712
REFERENCE   2  (bases 1 to 1629)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 1629)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-JUL-2017) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   4  (bases 1 to 1629)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   5  (bases 1 to 1629)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
            This record is derived from an annotated genomic sequence
            (NC_003070).
            COMPLETENESS: incomplete on the 5' end.
FEATURES             Location/Qualifiers
     source          1..1629
                     /organism="Arabidopsis thaliana"
                     /mol_type="mRNA"
                     /db_xref="taxon:3702"
                     /chromosome="1"
                     /ecotype="Columbia"
     gene            <1..1629
                     /locus_tag="AT1G33940"
                     /gene_synonym="T3M13.4; T3M13_4"
                     /db_xref="Araport:AT1G33940"
                     /db_xref="GeneID:840291"
                     /db_xref="TAIR:AT1G33940"
     CDS             1..1494
                     /locus_tag="AT1G33940"
                     /gene_synonym="T3M13.4; T3M13_4"
                     /inference="Similar to RNA sequence,
                     EST:INSD:EG490311.1,INSD:EG423297.1,INSD:EG490179.1"
                     /note="FUNCTIONS IN: molecular_function unknown; INVOLVED
                     IN: biological_process unknown; LOCATED IN:
                     cellular_component unknown; BEST Arabidopsis thaliana
                     protein match is: Protein kinase family protein with ARM
                     repeat domain (TAIR:AT5G18700.1); Has 128 Blast hits to 95
                     proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa
                     - 37; Fungi - 0; Plants - 78; Viruses - 0; Other
                     Eukaryotes - 13 (source: NCBI BLink)."
                     /codon_start=1
                     /product="Serine/Threonine-kinase ULK4-like protein"
                     /protein_id="NP_001154391.1"
                     /db_xref="Araport:AT1G33940"
                     /db_xref="GeneID:840291"
                     /db_xref="TAIR:AT1G33940"
                     /translation="MELDFDENDDDEGLDESEGTENTSCAQEERVMSQNEGHRRQGVI
                     SSNVPDENSSANEIPTSGEARDCHAEQSEPMDVSAAPLSASPQLKTHRGREISGSARE
                     QQVCLNLLNMAMIGSHHTFTSFGRHLVTLTEEKNLFPSLLSIIEQGTEVLRGKAPLFV
                     AFLCKNSRRWLTNFFCNARFLPVVDRLAKEKDSYLQQCLEAFVNVITSIIPGLLDTIT
                     NDIQQLMTGRRHGPVSPLNSRASVKTNAHLFPVVLHLLGSSLFKNKMVTPQVLRQLAN
                     LTKLVEASFQLKVVRRIGNLFEFVNAKDMEDFLEPTLSLCRAFLLRSLGNKIGLSSNY
                     TKEPMLLSETSFTFEVDPQECIRDIADFGSNIGLFLHFAGLDDDTSIAVADIASECVV
                     LLLKAASREATTGFLTNLPKITQILDSWRRRKSTELHLLVLKRVLHCLGYACKQYLSQ
                     AMILSISGHDISKINAIVSEMKNSDVAGLNSVASLVAMELQRLPRCV"
ORIGIN      
        1 atggaacttg attttgatga aaacgatgat gatgagggac ttgatgaatc agaaggaacc
       61 gagaacacct cttgtgcaca agaagaaaga gttatgagcc aaaatgaggg tcacagaaga
      121 caaggagtta taagcagtaa tgtccccgat gagaactcgt ctgcaaatga aataccaacc
      181 tcgggtgaag caagagattg ccatgcagag cagtcagagc caatggacgt gtcagctgcg
      241 ccacttagtg ctagtcctca acttaaaact caccgaggaa gagaaatttc tggcagtgca
      301 cgagagcagc aagtctgctt aaatcttctg aacatggcta tgattggaag tcatcataca
      361 ttcacaagct ttggaaggca tctcgtgaca ttgacagagg agaaaaatct tttccctagt
      421 ttactctcca tcatagagca aggaacggaa gttctgaggg ggaaagctcc tctctttgtt
      481 gcatttctct gcaaaaacag taggcgttgg ctgacaaatt tcttctgcaa tgcaagattt
      541 cttcctgtgg tggacagatt agctaaagag aaagacagtt acctgcaaca atgtcttgag
      601 gcatttgtga atgtaatcac ctccataata ccggggttgc tggatacaat aaccaatgat
      661 atccaacagc tgatgactgg aagacgccat ggacctgtct ctccccttaa cagtcgagct
      721 tctgtaaaga ctaatgcaca cctgttccct gtggttcttc accttctcgg aagctctttg
      781 tttaagaaca agatggtaac tccacaagtc ctaaggcagt tggcaaatct tacaaaactt
      841 gtggaagcat cgtttcagct caaagtagtg aggagaatcg gaaatctgtt tgaattcgtg
      901 aatgccaaag acatggaaga tttcctagaa cccactttaa gtctctgcag agcttttctg
      961 ctacggtcac ttgggaacaa gataggtctc agctccaact acacgaaaga gccaatgctt
     1021 ttatcagaga catcgtttac attcgaggtt gatccacagg aatgcataag agacattgca
     1081 gatttcggta gcaacattgg cctattctta cactttgcag gtttagatga cgacacaagc
     1141 atcgcagtcg cagatattgc ctctgaatgt gttgtgttgc tactcaaagc cgcttcgaga
     1201 gaagccacga caggattttt aaccaatctt cctaagatca cacagattct ggactcatgg
     1261 cgcaggagga agagcacaga gctacacttg ttggttctga agagagtctt gcattgtttg
     1321 ggttatgctt gcaagcagta tctatcgcag gcgatgattt tgtcgatatc gggacacgat
     1381 atctcgaaga tcaacgccat tgtctcggag atgaagaact cagacgtcgc tggtcttaat
     1441 agtgtcgctt cactcgttgc catggagttg cagagattac ctcgttgtgt ttgaagtcat
     1501 ctgaacaaag gattaacgac aatgacgctg agctgtagat tttgaaaccc agaatcaaga
     1561 tttgtctctt ttaatgtgta tttctcttca ttacaacttt tgtaccacta gttcaatcta
     1621 cttccttag
//
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