LOCUS NM_001160919 1629 bp mRNA linear PLN 20-OCT-2022
DEFINITION Arabidopsis thaliana Serine/Threonine-kinase ULK4-like protein
(AT1G33940), partial mRNA.
ACCESSION NM_001160919
VERSION NM_001160919.1
DBLINK BioProject: PRJNA116
BioSample: SAMN03081427
KEYWORDS RefSeq.
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 1629)
AUTHORS Theologis,A., Ecker,J.R., Palm,C.J., Federspiel,N.A., Kaul,S.,
White,O., Alonso,J., Altafi,H., Araujo,R., Bowman,C.L.,
Brooks,S.Y., Buehler,E., Chan,A., Chao,Q., Chen,H., Cheuk,R.F.,
Chin,C.W., Chung,M.K., Conn,L., Conway,A.B., Conway,A.R.,
Creasy,T.H., Dewar,K., Dunn,P., Etgu,P., Feldblyum,T.V., Feng,J.,
Fong,B., Fujii,C.Y., Gill,J.E., Goldsmith,A.D., Haas,B.,
Hansen,N.F., Hughes,B., Huizar,L., Hunter,J.L., Jenkins,J.,
Johnson-Hopson,C., Khan,S., Khaykin,E., Kim,C.J., Koo,H.L.,
Kremenetskaia,I., Kurtz,D.B., Kwan,A., Lam,B., Langin-Hooper,S.,
Lee,A., Lee,J.M., Lenz,C.A., Li,J.H., Li,Y., Lin,X., Liu,S.X.,
Liu,Z.A., Luros,J.S., Maiti,R., Marziali,A., Militscher,J.,
Miranda,M., Nguyen,M., Nierman,W.C., Osborne,B.I., Pai,G.,
Peterson,J., Pham,P.K., Rizzo,M., Rooney,T., Rowley,D., Sakano,H.,
Salzberg,S.L., Schwartz,J.R., Shinn,P., Southwick,A.M., Sun,H.,
Tallon,L.J., Tambunga,G., Toriumi,M.J., Town,C.D., Utterback,T.,
Van Aken,S., Vaysberg,M., Vysotskaia,V.S., Walker,M., Wu,D., Yu,G.,
Fraser,C.M., Venter,J.C. and Davis,R.W.
TITLE Sequence and analysis of chromosome 1 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 816-820 (2000)
PUBMED 11130712
REFERENCE 2 (bases 1 to 1629)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (19-OCT-2022) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 1629)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (18-JUL-2017) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
REFERENCE 4 (bases 1 to 1629)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
REFERENCE 5 (bases 1 to 1629)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
COMMENT REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
This record is derived from an annotated genomic sequence
(NC_003070).
COMPLETENESS: incomplete on the 5' end.
FEATURES Location/Qualifiers
source 1..1629
/organism="Arabidopsis thaliana"
/mol_type="mRNA"
/db_xref="taxon:3702"
/chromosome="1"
/ecotype="Columbia"
gene <1..1629
/locus_tag="AT1G33940"
/gene_synonym="T3M13.4; T3M13_4"
/db_xref="Araport:AT1G33940"
/db_xref="GeneID:840291"
/db_xref="TAIR:AT1G33940"
CDS 1..1494
/locus_tag="AT1G33940"
/gene_synonym="T3M13.4; T3M13_4"
/inference="Similar to RNA sequence,
EST:INSD:EG490311.1,INSD:EG423297.1,INSD:EG490179.1"
/note="FUNCTIONS IN: molecular_function unknown; INVOLVED
IN: biological_process unknown; LOCATED IN:
cellular_component unknown; BEST Arabidopsis thaliana
protein match is: Protein kinase family protein with ARM
repeat domain (TAIR:AT5G18700.1); Has 128 Blast hits to 95
proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa
- 37; Fungi - 0; Plants - 78; Viruses - 0; Other
Eukaryotes - 13 (source: NCBI BLink)."
/codon_start=1
/product="Serine/Threonine-kinase ULK4-like protein"
/protein_id="NP_001154391.1"
/db_xref="Araport:AT1G33940"
/db_xref="GeneID:840291"
/db_xref="TAIR:AT1G33940"
/translation="MELDFDENDDDEGLDESEGTENTSCAQEERVMSQNEGHRRQGVI
SSNVPDENSSANEIPTSGEARDCHAEQSEPMDVSAAPLSASPQLKTHRGREISGSARE
QQVCLNLLNMAMIGSHHTFTSFGRHLVTLTEEKNLFPSLLSIIEQGTEVLRGKAPLFV
AFLCKNSRRWLTNFFCNARFLPVVDRLAKEKDSYLQQCLEAFVNVITSIIPGLLDTIT
NDIQQLMTGRRHGPVSPLNSRASVKTNAHLFPVVLHLLGSSLFKNKMVTPQVLRQLAN
LTKLVEASFQLKVVRRIGNLFEFVNAKDMEDFLEPTLSLCRAFLLRSLGNKIGLSSNY
TKEPMLLSETSFTFEVDPQECIRDIADFGSNIGLFLHFAGLDDDTSIAVADIASECVV
LLLKAASREATTGFLTNLPKITQILDSWRRRKSTELHLLVLKRVLHCLGYACKQYLSQ
AMILSISGHDISKINAIVSEMKNSDVAGLNSVASLVAMELQRLPRCV"
ORIGIN
1 atggaacttg attttgatga aaacgatgat gatgagggac ttgatgaatc agaaggaacc
61 gagaacacct cttgtgcaca agaagaaaga gttatgagcc aaaatgaggg tcacagaaga
121 caaggagtta taagcagtaa tgtccccgat gagaactcgt ctgcaaatga aataccaacc
181 tcgggtgaag caagagattg ccatgcagag cagtcagagc caatggacgt gtcagctgcg
241 ccacttagtg ctagtcctca acttaaaact caccgaggaa gagaaatttc tggcagtgca
301 cgagagcagc aagtctgctt aaatcttctg aacatggcta tgattggaag tcatcataca
361 ttcacaagct ttggaaggca tctcgtgaca ttgacagagg agaaaaatct tttccctagt
421 ttactctcca tcatagagca aggaacggaa gttctgaggg ggaaagctcc tctctttgtt
481 gcatttctct gcaaaaacag taggcgttgg ctgacaaatt tcttctgcaa tgcaagattt
541 cttcctgtgg tggacagatt agctaaagag aaagacagtt acctgcaaca atgtcttgag
601 gcatttgtga atgtaatcac ctccataata ccggggttgc tggatacaat aaccaatgat
661 atccaacagc tgatgactgg aagacgccat ggacctgtct ctccccttaa cagtcgagct
721 tctgtaaaga ctaatgcaca cctgttccct gtggttcttc accttctcgg aagctctttg
781 tttaagaaca agatggtaac tccacaagtc ctaaggcagt tggcaaatct tacaaaactt
841 gtggaagcat cgtttcagct caaagtagtg aggagaatcg gaaatctgtt tgaattcgtg
901 aatgccaaag acatggaaga tttcctagaa cccactttaa gtctctgcag agcttttctg
961 ctacggtcac ttgggaacaa gataggtctc agctccaact acacgaaaga gccaatgctt
1021 ttatcagaga catcgtttac attcgaggtt gatccacagg aatgcataag agacattgca
1081 gatttcggta gcaacattgg cctattctta cactttgcag gtttagatga cgacacaagc
1141 atcgcagtcg cagatattgc ctctgaatgt gttgtgttgc tactcaaagc cgcttcgaga
1201 gaagccacga caggattttt aaccaatctt cctaagatca cacagattct ggactcatgg
1261 cgcaggagga agagcacaga gctacacttg ttggttctga agagagtctt gcattgtttg
1321 ggttatgctt gcaagcagta tctatcgcag gcgatgattt tgtcgatatc gggacacgat
1381 atctcgaaga tcaacgccat tgtctcggag atgaagaact cagacgtcgc tggtcttaat
1441 agtgtcgctt cactcgttgc catggagttg cagagattac ctcgttgtgt ttgaagtcat
1501 ctgaacaaag gattaacgac aatgacgctg agctgtagat tttgaaaccc agaatcaaga
1561 tttgtctctt ttaatgtgta tttctcttca ttacaacttt tgtaccacta gttcaatcta
1621 cttccttag
//