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PREDICTED: Glycine max 40S ribosomal protein S3-3 (LOC100799156), transcript variant X2, mRNA

NCBI Reference Sequence: XM_003535938.4

FASTA Graphics 

LOCUS       XM_003535938            1014 bp    mRNA    linear   PLN 19-APR-2021
DEFINITION  PREDICTED: Glycine max 40S ribosomal protein S3-3 (LOC100799156),
            transcript variant X2, mRNA.
ACCESSION   XM_003535938
VERSION     XM_003535938.4
DBLINK      BioProject: PRJNA48389
KEYWORDS    RefSeq.
SOURCE      Glycine max (soybean)
  ORGANISM  Glycine max
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50
            kb inversion clade; NPAAA clade; indigoferoid/millettioid clade;
            Phaseoleae; Glycine; Glycine subgen. Soja.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_038246.2) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 19, 2021 this sequence version replaced XM_003535938.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Glycine max Annotation Release 104
            Annotation Version          :: 104
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1014
                     /organism="Glycine max"
                     /mol_type="mRNA"
                     /cultivar="Williams 82"
                     /db_xref="taxon:3847"
                     /chromosome="10"
                     /tissue_type="callus"
     gene            1..1014
                     /gene="LOC100799156"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 64 ESTs, 370 long SRA reads, 37
                     Proteins, and 99% coverage of the annotated genomic
                     feature by RNAseq alignments, including 119 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:100799156"
     CDS             155..865
                     /gene="LOC100799156"
                     /codon_start=1
                     /product="40S ribosomal protein S3-3 isoform X2"
                     /protein_id="XP_003535986.1"
                     /db_xref="GeneID:100799156"
                     /translation="MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPM
                     RTEIIIRATRTQAVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQA
                     ESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISS
                     GQPVKDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPKTPLPDLVTIHSPKEEEE
                     YIQPAPVLAANDIEVPVA"
ORIGIN      
        1 atattctgtt taatttctat ttttgtatcg tctttgcagt gtgtcggcct ctacctatat
       61 attccactca ctacccagaa actagggttt agcgccacac cccaatcgta gccgtcgcac
      121 tctgtgtttt cagcgccgtc tccgatctcc gacaatggcg acccaaatga gcaagaagag
      181 aaagttcgta gctgatggag tgttcttcgc tgaactgaac gaggttctga caagagagtt
      241 ggccgaggac ggttactccg gcgtggaagt tagggttacg ccgatgcgca ccgaaatcat
      301 aattagagcc accagaaccc aagctgttct cggtgagaag ggaaggagaa taagggaact
      361 tacctctgtg gttcagaaga ggttcaagtt tcccgagaac agtgtcgaac tttatgctga
      421 aaaggtcaac aataggggtc tttgcgctat tgctcaggct gagtctcttc gatacaagct
      481 ccttggtgga ctcgctgtgc gcagggcctg ctatggtgtt ttgaggtttg ttatggagag
      541 tggtgctaag ggatgcgagg tcattgtgag tggaaaattg agagcccaga gagccaaatc
      601 tatgaagttt aaggatgggt acatgatttc ttctgggcaa cctgtcaaag attacattga
      661 ctctgcagtg agacatgtgc tcctgagaca gggtgttctt ggcattaagg tgaagatcat
      721 gcttgattgg gatcctaagg ggaaacaggg tcctaaaact cccctccctg atcttgtcac
      781 aatccattct ccaaaggagg aagaagaata catccagcct gctccagttt tggctgctaa
      841 tgatattgag gtccctgttg cttgaaaagt tatacgctgg aggagtaatt catattagct
      901 tagtgcctag tttttcttgt atgcaatgtt tgttgttgaa gacatgttca aaattttgaa
      961 gaaattgtta tactcagtta caagtatttt aagtcatttg ttttatcttt ctca
//
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