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NCBI Reference Sequence: NM_001127299.1
FASTA Graphics
LOCUS NM_001127299 3719 bp mRNA linear ROD 03-APR-2024 DEFINITION Rattus norvegicus LRAT domain containing 1 (Lratd1), mRNA. ACCESSION NM_001127299 XM_001073672 XM_234036 VERSION NM_001127299.1 KEYWORDS RefSeq; RefSeq Select. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE 1 (bases 1 to 3719) AUTHORS Kobayashi,T., Masaki,T., Sugiyama,M., Atomi,Y., Furukawa,Y. and Nakamura,Y. TITLE A gene encoding a family with sequence similarity 84, member A (FAM84A) enhanced migration of human colon cancer cells JOURNAL Int J Oncol 29 (2), 341-347 (2006) PUBMED 16820875 COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CH473947.1. On or before May 11, 2008 this sequence version replaced XM_234036.4, XM_001073672.1. ##RefSeq-Attributes-START## RefSeq Select criteria :: based on single protein-coding transcript ##RefSeq-Attributes-END## FEATURES Location/Qualifiers source 1..3719 /organism="Rattus norvegicus" /mol_type="mRNA" /db_xref="taxon:10116" /chromosome="6" /map="6q15" gene 1..3719 /gene="Lratd1" /gene_synonym="Fam84a; RGD1305779" /note="LRAT domain containing 1" /db_xref="GeneID:313969" /db_xref="RGD:1305779" exon 1..310 /gene="Lratd1" /gene_synonym="Fam84a; RGD1305779" /inference="alignment:Splign:2.1.0" exon 311..468 /gene="Lratd1" /gene_synonym="Fam84a; RGD1305779" /inference="alignment:Splign:2.1.0" exon 469..567 /gene="Lratd1" /gene_synonym="Fam84a; RGD1305779" /inference="alignment:Splign:2.1.0" misc_feature 517..519 /gene="Lratd1" /gene_synonym="Fam84a; RGD1305779" /note="upstream in-frame stop codon" CDS 520..1482 /gene="Lratd1" /gene_synonym="Fam84a; RGD1305779" /note="protein FAM84A; family with sequence similarity 84, member A" /codon_start=1 /product="protein LRATD1" /protein_id="NP_001120771.1" /db_xref="GeneID:313969" /db_xref="RGD:1305779" /translation="MPANQSVIVQGAVRDGISVPGPGLAASLMGNQLDRITHLNYSEL PTGDPSGIEKDELRVGVAYFFSDEEEDLDERGQPDKFGVKGPPGCSPCPESPSRHHHH LLHQLVLNETQFSAFRGQECIFSKVTGGPQGADLSVYAVTALPAICEPGDLLELLWLQ PATEQPAPAPHWAVYVGGGQIIHLHQGEIRQDSLYQAGAANVGRVVNSWYRYRPLVAE LVVQNACGHLGLKSEEICWTNSESFAAWCRFGKREFKAGGEVPAGTQPPQQQYYLKVH LEENKVHTARFHSLEDLIREKRRIDASGRLRVLQELEDFVDDKE" exon 568..3719 /gene="Lratd1" /gene_synonym="Fam84a; RGD1305779" /inference="alignment:Splign:2.1.0" ORIGIN 1 tagccaatgg gcgcgttccg gggcgggcct ggaaaacggc tgttcagggg atttaagagt 61 cgtccgcgcg gctgtaggaa agccgagtgg agccaggact tgccaggtgg agcagacgcc 121 caagccagcg tagacacgga gcgcaccctc accgctctgg gtacctcacc tcactgcttg 181 tctccggata gatctgaacc gcagtcccac gcgcctccag gacccactcg ccactgccgc 241 ctccacagca cccatgggga cctggagact ttaaaaggag tttggggttt cgggcgcagg 301 gaaatcacgg cagcctcgcc ctggcgcagt ccgattggct ctatgagaag gcaagcaagg 361 agagggcaga gtgtacctgc ctgcgtgggc aggtgtgccc cggtgcttga gtgtacgtgc 421 aagtgtgcag gcatacgtcc ggaattgtgt aggaattggg ggtagatact tgtcagtgtc 481 tggactccaa gtgtgcaaaa tgttgctgat gtcaattgaa tgcctgcaaa ccagtctgtc 541 attgtgcaag gcgctgtaag ggatgggatc tcagttcctg gccctggcct cgccgcgtca 601 ttgatgggca accaactgga tcgcatcacc cacctcaact acagcgagtt gcccactggg 661 gacccatctg ggattgagaa ggacgagctg cgagtcgggg ttgcctactt cttctcggat 721 gaggaggagg acctggacga acgcgggcag ccggacaagt ttggtgtgaa gggccctcca 781 ggttgtagcc cttgcccaga gagccccagc cgccaccatc accacctgct gcaccagctc 841 gtcctcaacg agactcagtt ctccgccttc cgaggccagg aatgcatctt ttccaaagtg 901 accggcggcc ctcagggcgc cgacttgagt gtatacgcgg tcactgcgct gcccgcgatc 961 tgcgagccgg gcgatctgct agagctcttg tggctacagc cggcgaccga gcagcccgcg 1021 ccagcccctc actgggccgt ctacgtgggc ggcgggcaga tcatccacct gcaccaaggc 1081 gagatccgcc aggacagcct gtaccaggcg ggcgcggcca acgtgggccg ggtggtgaat 1141 agctggtacc gctaccgccc gctggtggcc gagttggtgg tgcagaacgc ctgtggccac 1201 ctgggcctca agagcgagga gatctgctgg acgaactccg agagcttcgc tgcctggtgc 1261 cgctttggaa agcgcgagtt caaggctgga ggggaggttc ccgcaggaac gcagcctccg 1321 caacagcagt attatctcaa ggtgcatcta gaggagaaca aagtccatac ggctcggttc 1381 cacagcctgg aggacctcat ccgcgagaag cgtcgcatag acgccagtgg ccgccttcga 1441 gtgcttcagg agcttgagga ctttgtggat gacaaggagt agcctccgag ggaccgcccg 1501 gcgcgccagt tcccacgccc ggagctccct tccagtcccc gcagttctgc actccacgcc 1561 cccctaacgc gcccgcccag gaccagcgtc tagaagcttc aagaactaac caacccccgc 1621 actgggcgag cgcagctgca cacccctaag acagcccggg tgttggtgac cgtgccaggg 1681 taacccagcc tgcacctctc ccctgggttg tgaagggaaa gagggagtgg gcaaaagggg 1741 agcaaggaca ctacctttcc agcgagccaa gggtcagtga ctcttcagca gacagggcaa 1801 atatccttag tcacagggaa ccgtcaccac tatccccaga tgcgcacaca cagaccagac 1861 ggaggtgaga attagtcttt tggggacaca attcaactcc cgagtggaga gtggtgtgtc 1921 ctgggatatc agaattccca tgaaaccgag cctgtctctg tgtacttggg agcacttcag 1981 ggactccagg ttaccctgag gctgcccagc actgtcctgc agctctccag ccccagagtc 2041 tcctgacaaa gcattccagg cttccggctg agctagatag gtttggcttc ccgtttgtac 2101 aactggaagt agatgccatc cccggcttga ccaacacttg ccagaaagaa agccttctgg 2161 gtcccgggag gaaaatggct gaagcacttc tttgggagag gagggcttgc cggctccgga 2221 aaaggagcta attcacctgg tgtgtgggca cttgaactta ggaaggagga ggctttttgc 2281 ccatgattgc ttccctcctc actcacagag tcctgttttc tgagggactg aagaagaggg 2341 aggcagggaa gatctacaac attccagaaa ccagcattag gacagcctag ccagtgtctt 2401 tagtttggct tttcctaacc agaagatctt agaaggcggg gggaggtgga gattgtttgt 2461 aaaatgaaac agcagttttc caacgatatc aacaaagcct acagtgtcga cgcttctctt 2521 gatcattttt agcaacatgc taatgaaatt tcaaattgaa atttttattt tcatggcttt 2581 aatccatgat agcttaaata ccgggggcca ttaggagtgg aatttagcta agaccttagc 2641 tgacattgct ttcactctgg tttttctcaa ctcttatgag aattctgttt gggggatatt 2701 atagttatta cttttttttt cctggcttta caaagcaggc ctgcaacggt ggagctgttc 2761 attagtgtgt atattatact gaatttttgt cagttcaagg gtctgctgct ttggtgaaaa 2821 ttgctagcaa gttccacgag gggtcttttc tttatgctgt atatcattac catttcatct 2881 ttgcattgcc ctcccccttg tcctcacctc ttgattcccc ttgaaaggaa tctagagttc 2941 atgggattcg ggggccctct tttgtagctt gtcctgctgt ttatttctga gaacagggaa 3001 gcgctcttag aagcaggaca gaatgtgtgt ctttcaaaac gtgaaggtta tgtgaagctc 3061 cttcctttgg gcaagagttt gtggattttt ctccaagggg tacaacccca gcctaactga 3121 tcgttacttg attctatgtg ctagacacat tttagaaggt atacattctc tcttgaggga 3181 gttcatcaga aaatggtgtt tagctaatgg tcgcaagcaa ttgaacacta tggtttagtt 3241 gaacagcaaa cactacgtcc aaagccactc tcttggcatt tcaaaaatga tgcaataaaa 3301 actaatggaa gttagccgac agggaaatgc catttcaatg gtaaatagtt tgtttctgtt 3361 ttctggggat ttttgttgtt ttatttcatt tcatcttgtt ttcatgctgg attcattctc 3421 tgatcctgag tcaaaaggtc aaatcaatga aatatgaact aaagtatttt ttctgaagcc 3481 aatcgagtga tttatttttt gaaactgcta tgcttttctt tcagcacata caacagcaaa 3541 acttttgtaa caactaaact taacctttgc atgtatggag aacttactta ctctttaggc 3601 aaatgacaga ttgatgacca taaaccaaaa ttctttcttg tgtctacaca caacatatcc 3661 tttcctgtgt cctattactg tatcttggct ccctgctgaa ttaaacacca tcctaagca //
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