LOCUS AY074845 1848 bp mRNA linear PLN 11-FEB-2002
DEFINITION Arabidopsis thaliana AT5g55220/MCO15_17 mRNA, complete cds.
ACCESSION AY074845
VERSION AY074845.1
KEYWORDS FLI_CDNA.
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 1848)
AUTHORS Shinn,P., Chen,H., Cheuk,R., Kim,C.J., Meyers,M.C., Banh,J.,
Bowser,L., Carninci,P., Chang,E., Dale,J.M., Goldsmith,A.D.,
Hayashizaki,Y., Ishida,J., Jones,T., Kamiya,A., Karlin-Neumann,G.,
Kawai,J., Lam,B., Lee,J.M., Lin,J., Miranda,M., Narusaka,M.,
Nguyen,M., Onodera,C.S., Palm,C.J., Quach,H.L., Sakurai,T.,
Satou,M., Seki,M., Southwick,A., Tang,C.C., Toriumi,M., Wu,H.C.,
Yamada,K., Yamamura,Y., Yu,G., Yu,S., Shinozaki,K., Davis,R.W.,
Theologis,A. and Ecker,J.R.
TITLE Arabidopsis cDNA clones
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 1848)
AUTHORS Shinn,P., Chen,H., Cheuk,R., Kim,C.J., Meyers,M.C., Banh,J.,
Bowser,L., Carninci,P., Chang,E., Dale,J.M., Goldsmith,A.D.,
Hayashizaki,Y., Ishida,J., Jones,T., Kamiya,A., Karlin-Neumann,G.,
Kawai,J., Lam,B., Lee,J.M., Lin,J., Miranda,M., Narusaka,M.,
Nguyen,M., Onodera,C.S., Palm,C.J., Quach,H.L., Sakurai,T.,
Satou,M., Seki,M., Southwick,A., Tang,C.C., Toriumi,M., Wu,H.C.,
Yamada,K., Yamamura,Y., Yu,G., Yu,S., Shinozaki,K., Davis,R.W.,
Theologis,A. and Ecker,J.R.
TITLE Direct Submission
JOURNAL Submitted (14-JAN-2002) Salk Institute Genomic Analysis Laboratory
(SIGnAL), Plant Biology Laboratory, The Salk Institute for
Biological Studies, 10010 N. Torrey Pines Road, La Jolla, CA 92037,
USA
COMMENT RIKEN Genomic Sciences Center (GSC) members carried out the
collection and clustering of RAFL cDNAs (RAFL cDNA : 'RIKEN
Arabidopsis Full-Length cDNA') : Seki,M., Narusaka,M., Ishida,J.,
Satou,M., Kamiya,A., Sakurai,T., Carninci,P., Kawai,J.,
Hayashizaki,Y. and Shinozaki,K.
The Salk, Stanford, PGEC (SSP) Consortium members carried out the
sequencing and annotation of the RAFL cDNAs: Shinn,P., Chen,H.,
Cheuk,R., Kim,C.J., Meyers,M.C., Banh,J. Bowser,L., Chang,E.,
Dale,J.M., Goldsmith,A.D., Jones,T., Karlin-Neumann,G., Lam,B.,
Lee,J.M., Lin,J., Miranda,M., Nguyen,M., Onodera,C.S., Palm,C.J.,
Quach,H.L., Southwick,A., Tang,C.C., Toriumi,M., Wu,H.C.,
Yamada,K., Yamamura, Y., Yu,G., Yu,S., Davis,R.W., Theologis,A.,
and Ecker,J.R.
Shinn,P. (SSP/Salk) and Seki,M. (RIKEN GSC) contributed equally to
this work. Shinozaki,K. (RIKEN GSC) and Ecker,J.R. (SSP/Salk)
contributed equally to this work as PIs.
FEATURES Location/Qualifiers
source 1..1848
/organism="Arabidopsis thaliana"
/mol_type="mRNA"
/db_xref="taxon:3702"
/chromosome="5"
/clone="RAFL05-17-D18(R21533)"
/ecotype="Columbia"
5'UTR 1..61
CDS 62..1705
/note="trigger factor-like protein"
/codon_start=1
/product="AT5g55220/MCO15_17"
/protein_id="AAL75898.1"
/translation="MELCVISTTTTVKAINPFLPSITRRVSSRLFQSDSVLQFGGRLK
KPISRPLDMSCVSRKIGFFGDFMSHGGNFRLFAAASPAVETSVKEDKLPADLKVTETV
QANSSVKLSVEVPEIVCEDCYQRVLTEFMKLSKVPGFRPKTRVPENIIVGFVGRQYVL
RATVESILKRTLPHAMESVTGRALKDSIQIVSSFPDMEKAYSKLKTLSYEVVVDVVPE
LKWNPEDGYKNMKVVVELGDEIDAKKACERQLRQKYKSLGALKIVTERGLQVGDLAVV
DISATTIDEDGSTGQAIPDAESKGFHFDTEEGNRLLPGFLDAIIGIRAGESKSFTLVF
PESWKQESLRGQRAQFTVDCKELFYRDLPTLDDSLADKLLPGCTTLKEVEETLAKRCQ
EMEQEAKEQATDNAILEQIRKMVEVEIPQSLFEEQGRQFYGARLLEIQGNMKLNEDQL
ASLSSQKAVNEFLETQRESITNIIKQNIAVGDIFKRENLEFSTDELVKEVENSISEFK
KHKQEFDEERVKDQVQEILEGAKVLEWLKDRAEIQYITR"
3'UTR 1706..1848
ORIGIN
1 aagaagaagt ggcgcttcat tcattagctc tgttcagtat aagcaagaag agagagcgaa
61 aatggagctc tgtgttatca gcacgactac gacggtgaag gcaattaatc cgtttcttcc
121 gtctattaca cgtcgtgtta gttcccgtct cttccaatca gatagtgtgc tacagtttgg
181 tgggaggttg aagaaaccaa ttagcaggcc tttggacatg tcttgtgtct ctagaaaaat
241 tggatttttc ggagatttta tgtcacatgg tggtaatttt aggctattcg cggcggcttc
301 tccagcggtt gaaactagtg taaaggaaga caaacttcca gctgatctta aggtcacgga
361 gactgtacag gcgaattcaa gtgtgaaatt gagtgtggaa gttccagaaa ttgtctgtga
421 agattgttac caacgagtcc ttaccgaatt catgaaactc tcaaaggtgc ctggattccg
481 tcctaaaaca agagttccag agaatattat tgttggtttc gttgggaggc aatatgttct
541 gagagcaact gttgaatcta tcttaaagag aacacttcct cacgccatgg aatcagtgac
601 tggaagggct ttaaaagact cgatacagat tgtaagcagt tttccagata tggagaaggc
661 ttattctaag ctcaagactc ttagttatga ggtggttgtt gatgttgtac ctgaactaaa
721 atggaatcct gaggatgggt ataaaaatat gaaggtcgtt gtagaactag gcgatgagat
781 agatgcaaaa aaagcttgtg aaagacaact aagacagaaa tacaagtctc ttggtgcgtt
841 gaagattgta accgagcgag ggctacaggt gggagatcta gcagttgttg atatttctgc
901 tacaactata gatgaggacg ggtcaacggg tcaagcgatt ccagatgctg aaagcaaagg
961 ttttcacttt gacactgaag aagggaatag attacttcct ggattccttg atgcaatcat
1021 aggaattcga gcaggcgaat caaagtcatt cacgcttgtg tttcctgaat catggaaaca
1081 agaaagtcta cgtggccaac gtgctcaatt cactgttgac tgcaaggaac ttttctacag
1141 agatttacca acattagatg actcactcgc tgataaattg cttcctggat gcaccacttt
1201 aaaggaggtt gaagaaactc tggctaaaag atgtcaagag atggagcagg aagccaagga
1261 gcaagcgaca gacaacgcca tccttgagca gattcgaaag atggttgaag tagagattcc
1321 tcaatcttta tttgaggaac aaggaagaca gttttatgga gctaggcttc tagagattca
1381 gggaaacatg aagcttaacg aagaccagtt ggcttctctt tcaagtcaaa aagcagtaaa
1441 tgagtttcta gaaactcaaa gagagagcat caccaacata atcaagcaga atatagctgt
1501 tggagatatc ttcaagcgcg aaaacttaga gttctcaaca gatgaactag ttaaagaggt
1561 cgaaaactcg atctcagaat tcaagaaaca taaacaagag ttcgacgagg agcgtgtgaa
1621 agatcaggta caagagattt tagaaggagc aaaagtgctt gaatggttaa aagaccgagc
1681 cgagattcaa tacatcactc gttgattagc atataggtaa tgtatgtatg attggcatgt
1741 tctgtttttg tatgagcaat ttggttttga tgtacaatta tgattgattt tgtcagaaga
1801 agagaacttt gactatattt gaattgatag gtgcaataaa ttattaac
//