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Arabidopsis thaliana alpha/beta-Hydrolases superfamily protein (AT1G52470), mRNA

NCBI Reference Sequence: NM_001124003.1

FASTA Graphics 

LOCUS       NM_001124003            1106 bp    mRNA    linear   PLN 20-OCT-2022
DEFINITION  Arabidopsis thaliana alpha/beta-Hydrolases superfamily protein
            (AT1G52470), mRNA.
ACCESSION   NM_001124003
VERSION     NM_001124003.1
DBLINK      BioProject: PRJNA116
            BioSample: SAMN03081427
KEYWORDS    RefSeq.
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 1106)
  AUTHORS   Theologis,A., Ecker,J.R., Palm,C.J., Federspiel,N.A., Kaul,S.,
            White,O., Alonso,J., Altafi,H., Araujo,R., Bowman,C.L.,
            Brooks,S.Y., Buehler,E., Chan,A., Chao,Q., Chen,H., Cheuk,R.F.,
            Chin,C.W., Chung,M.K., Conn,L., Conway,A.B., Conway,A.R.,
            Creasy,T.H., Dewar,K., Dunn,P., Etgu,P., Feldblyum,T.V., Feng,J.,
            Fong,B., Fujii,C.Y., Gill,J.E., Goldsmith,A.D., Haas,B.,
            Hansen,N.F., Hughes,B., Huizar,L., Hunter,J.L., Jenkins,J.,
            Johnson-Hopson,C., Khan,S., Khaykin,E., Kim,C.J., Koo,H.L.,
            Kremenetskaia,I., Kurtz,D.B., Kwan,A., Lam,B., Langin-Hooper,S.,
            Lee,A., Lee,J.M., Lenz,C.A., Li,J.H., Li,Y., Lin,X., Liu,S.X.,
            Liu,Z.A., Luros,J.S., Maiti,R., Marziali,A., Militscher,J.,
            Miranda,M., Nguyen,M., Nierman,W.C., Osborne,B.I., Pai,G.,
            Peterson,J., Pham,P.K., Rizzo,M., Rooney,T., Rowley,D., Sakano,H.,
            Salzberg,S.L., Schwartz,J.R., Shinn,P., Southwick,A.M., Sun,H.,
            Tallon,L.J., Tambunga,G., Toriumi,M.J., Town,C.D., Utterback,T.,
            Van Aken,S., Vaysberg,M., Vysotskaia,V.S., Walker,M., Wu,D., Yu,G.,
            Fraser,C.M., Venter,J.C. and Davis,R.W.
  TITLE     Sequence and analysis of chromosome 1 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 408 (6814), 816-820 (2000)
   PUBMED   11130712
REFERENCE   2  (bases 1 to 1106)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 1106)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-JUL-2017) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   4  (bases 1 to 1106)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   5  (bases 1 to 1106)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
            This record is derived from an annotated genomic sequence
            (NC_003070).
FEATURES             Location/Qualifiers
     source          1..1106
                     /organism="Arabidopsis thaliana"
                     /mol_type="mRNA"
                     /db_xref="taxon:3702"
                     /chromosome="1"
                     /ecotype="Columbia"
     gene            1..1106
                     /locus_tag="AT1G52470"
                     /gene_synonym="F6D8.31; F6D8_31"
                     /db_xref="Araport:AT1G52470"
                     /db_xref="GeneID:841678"
                     /db_xref="TAIR:AT1G52470"
     CDS             134..676
                     /locus_tag="AT1G52470"
                     /gene_synonym="F6D8.31; F6D8_31"
                     /inference="Similar to RNA sequence,
                     EST:INSD:EG441554.1,INSD:EG441565.1,INSD:EG458813.1,
                     INSD:EG458806.1,INSD:EG441576.1,INSD:EG458812.1"
                     /note="alpha/beta-Hydrolases superfamily protein; INVOLVED
                     IN: biological_process unknown; LOCATED IN:
                     cellular_component unknown; EXPRESSED IN: flower;
                     EXPRESSED DURING: 4 anthesis; BEST Arabidopsis thaliana
                     protein match is: alpha/beta-Hydrolases superfamily
                     protein (TAIR:AT1G52460.1); Has 30201 Blast hits to 17322
                     proteins in 780 species: Archae - 12; Bacteria - 1396;
                     Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
                     Other Eukaryotes - 2996 (source: NCBI BLink)."
                     /codon_start=1
                     /product="alpha/beta-Hydrolases superfamily protein"
                     /protein_id="NP_001117475.1"
                     /db_xref="Araport:AT1G52470"
                     /db_xref="GeneID:841678"
                     /db_xref="TAIR:AT1G52470"
                     /translation="MAASSSRNGANVLDLKCSHFVEPQGDQRASIVWLHDKDEHFTDS
                     VQFVKSLKLKNVNWICPPIVYTNTSYDFGSNIKQDDREALDSAAKFVADLLLREPLNV
                     VKGVGGFGMGAVVALQFATNCALGHYPINPRVVVGINGWLSITGSITSSIEYTVGAVA
                     RAASQKIFFTRGAGNLYFPL"
ORIGIN      
        1 accatcactg gcttccgaaa ctcctctcaa aaatatagaa aagaaaatcc tttaacaaaa
       61 aacagatata gaaaaatctg ctaagtaaaa aaataaaaat aaaagaacta gtcaagtttt
      121 ttctcatcaa aacatggcgg cttctagtag tagaaatgga gcaaatgtac ttgacttaaa
      181 atgcagtcat tttgtggaac ctcaaggaga tcaaagggcc agtatagtat ggctgcatga
      241 taaggatgag catttcactg attcagtgca gtttgtgaaa agtttaaaac ttaaaaatgt
      301 caactggatt tgtccaccta tcgtctacac aaatacatcg tacgacttcg gatctaatat
      361 caaacaagat gatcgagagg cattagattc cgcagctaaa tttgttgctg atcttttatt
      421 gcgtgaacca ctaaatgtcg taaaaggagt aggaggcttt ggcatgggtg cagtagtagc
      481 tctccaattt gcaacaaatt gtgctcttgg acattatcct ataaatcccc gagttgttgt
      541 tggaattaat gggtggcttt ctattacggg gagcataaca agcagcatag aatatacagt
      601 tggggctgta gctcgtgctg catcacagaa aatctttttt acacgtggag caggtaatct
      661 ttattttcct ctttagataa tggtcacaag gtaatgctaa gtctttagtc tttatggttg
      721 tttttgtcgt agagaatcgt ctacttcctt acacccgtga agaagaagtt gttgagtccc
      781 ttagagaggc tggttttgga gacgtctttt tcttaatata ctcatggctt cgacatgaac
      841 atcatttaga catcagagat atgctcaaac tctggctgga actgagtctc ccaatcacca
      901 aaacttcacc tctacgataa agaccgcacg ttgtctagtg atttattatc gtcgtttctt
      961 ttctttatta tgagtaaaat agcgtgagtt ggtactatca agttgtggta actttttatt
     1021 tataaataaa taattcttac ttataagcca tttatttcaa attttactaa ttgtaaaatt
     1081 tcctttctct atacaaattt ttaatt
//
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