LOCUS NM_001124003 1106 bp mRNA linear PLN 20-OCT-2022
DEFINITION Arabidopsis thaliana alpha/beta-Hydrolases superfamily protein
(AT1G52470), mRNA.
ACCESSION NM_001124003
VERSION NM_001124003.1
DBLINK BioProject: PRJNA116
BioSample: SAMN03081427
KEYWORDS RefSeq.
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 1106)
AUTHORS Theologis,A., Ecker,J.R., Palm,C.J., Federspiel,N.A., Kaul,S.,
White,O., Alonso,J., Altafi,H., Araujo,R., Bowman,C.L.,
Brooks,S.Y., Buehler,E., Chan,A., Chao,Q., Chen,H., Cheuk,R.F.,
Chin,C.W., Chung,M.K., Conn,L., Conway,A.B., Conway,A.R.,
Creasy,T.H., Dewar,K., Dunn,P., Etgu,P., Feldblyum,T.V., Feng,J.,
Fong,B., Fujii,C.Y., Gill,J.E., Goldsmith,A.D., Haas,B.,
Hansen,N.F., Hughes,B., Huizar,L., Hunter,J.L., Jenkins,J.,
Johnson-Hopson,C., Khan,S., Khaykin,E., Kim,C.J., Koo,H.L.,
Kremenetskaia,I., Kurtz,D.B., Kwan,A., Lam,B., Langin-Hooper,S.,
Lee,A., Lee,J.M., Lenz,C.A., Li,J.H., Li,Y., Lin,X., Liu,S.X.,
Liu,Z.A., Luros,J.S., Maiti,R., Marziali,A., Militscher,J.,
Miranda,M., Nguyen,M., Nierman,W.C., Osborne,B.I., Pai,G.,
Peterson,J., Pham,P.K., Rizzo,M., Rooney,T., Rowley,D., Sakano,H.,
Salzberg,S.L., Schwartz,J.R., Shinn,P., Southwick,A.M., Sun,H.,
Tallon,L.J., Tambunga,G., Toriumi,M.J., Town,C.D., Utterback,T.,
Van Aken,S., Vaysberg,M., Vysotskaia,V.S., Walker,M., Wu,D., Yu,G.,
Fraser,C.M., Venter,J.C. and Davis,R.W.
TITLE Sequence and analysis of chromosome 1 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 816-820 (2000)
PUBMED 11130712
REFERENCE 2 (bases 1 to 1106)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (19-OCT-2022) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 1106)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (18-JUL-2017) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
REFERENCE 4 (bases 1 to 1106)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
REFERENCE 5 (bases 1 to 1106)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
COMMENT REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
This record is derived from an annotated genomic sequence
(NC_003070).
FEATURES Location/Qualifiers
source 1..1106
/organism="Arabidopsis thaliana"
/mol_type="mRNA"
/db_xref="taxon:3702"
/chromosome="1"
/ecotype="Columbia"
gene 1..1106
/locus_tag="AT1G52470"
/gene_synonym="F6D8.31; F6D8_31"
/db_xref="Araport:AT1G52470"
/db_xref="GeneID:841678"
/db_xref="TAIR:AT1G52470"
CDS 134..676
/locus_tag="AT1G52470"
/gene_synonym="F6D8.31; F6D8_31"
/inference="Similar to RNA sequence,
EST:INSD:EG441554.1,INSD:EG441565.1,INSD:EG458813.1,
INSD:EG458806.1,INSD:EG441576.1,INSD:EG458812.1"
/note="alpha/beta-Hydrolases superfamily protein; INVOLVED
IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: flower;
EXPRESSED DURING: 4 anthesis; BEST Arabidopsis thaliana
protein match is: alpha/beta-Hydrolases superfamily
protein (TAIR:AT1G52460.1); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink)."
/codon_start=1
/product="alpha/beta-Hydrolases superfamily protein"
/protein_id="NP_001117475.1"
/db_xref="Araport:AT1G52470"
/db_xref="GeneID:841678"
/db_xref="TAIR:AT1G52470"
/translation="MAASSSRNGANVLDLKCSHFVEPQGDQRASIVWLHDKDEHFTDS
VQFVKSLKLKNVNWICPPIVYTNTSYDFGSNIKQDDREALDSAAKFVADLLLREPLNV
VKGVGGFGMGAVVALQFATNCALGHYPINPRVVVGINGWLSITGSITSSIEYTVGAVA
RAASQKIFFTRGAGNLYFPL"
ORIGIN
1 accatcactg gcttccgaaa ctcctctcaa aaatatagaa aagaaaatcc tttaacaaaa
61 aacagatata gaaaaatctg ctaagtaaaa aaataaaaat aaaagaacta gtcaagtttt
121 ttctcatcaa aacatggcgg cttctagtag tagaaatgga gcaaatgtac ttgacttaaa
181 atgcagtcat tttgtggaac ctcaaggaga tcaaagggcc agtatagtat ggctgcatga
241 taaggatgag catttcactg attcagtgca gtttgtgaaa agtttaaaac ttaaaaatgt
301 caactggatt tgtccaccta tcgtctacac aaatacatcg tacgacttcg gatctaatat
361 caaacaagat gatcgagagg cattagattc cgcagctaaa tttgttgctg atcttttatt
421 gcgtgaacca ctaaatgtcg taaaaggagt aggaggcttt ggcatgggtg cagtagtagc
481 tctccaattt gcaacaaatt gtgctcttgg acattatcct ataaatcccc gagttgttgt
541 tggaattaat gggtggcttt ctattacggg gagcataaca agcagcatag aatatacagt
601 tggggctgta gctcgtgctg catcacagaa aatctttttt acacgtggag caggtaatct
661 ttattttcct ctttagataa tggtcacaag gtaatgctaa gtctttagtc tttatggttg
721 tttttgtcgt agagaatcgt ctacttcctt acacccgtga agaagaagtt gttgagtccc
781 ttagagaggc tggttttgga gacgtctttt tcttaatata ctcatggctt cgacatgaac
841 atcatttaga catcagagat atgctcaaac tctggctgga actgagtctc ccaatcacca
901 aaacttcacc tctacgataa agaccgcacg ttgtctagtg atttattatc gtcgtttctt
961 ttctttatta tgagtaaaat agcgtgagtt ggtactatca agttgtggta actttttatt
1021 tataaataaa taattcttac ttataagcca tttatttcaa attttactaa ttgtaaaatt
1081 tcctttctct atacaaattt ttaatt
//