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PREDICTED: Mus musculus hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 (Hsd3b1), transcript variant X1, mRNA

NCBI Reference Sequence: XM_006501036.3

FASTA Graphics 

LOCUS       XM_006501036            1647 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus hydroxy-delta-5-steroid dehydrogenase, 3
            beta- and steroid delta-isomerase 1 (Hsd3b1), transcript variant
            X1, mRNA.
ACCESSION   XM_006501036
VERSION     XM_006501036.3
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000069.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Aug 8, 2019 this sequence version replaced XM_006501036.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1647
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="3"
     gene            1..1647
                     /gene="Hsd3b1"
                     /gene_synonym="3-beta-HSD I; D3Ertd383e"
                     /note="hydroxy-delta-5-steroid dehydrogenase, 3 beta- and
                     steroid delta-isomerase 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 27
                     ESTs, 1 long SRA read, 25 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 5 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:15492"
                     /db_xref="MGI:MGI:96233"
     CDS             371..1492
                     /gene="Hsd3b1"
                     /gene_synonym="3-beta-HSD I; D3Ertd383e"
                     /codon_start=1
                     /product="3 beta-hydroxysteroid dehydrogenase/Delta
                     5-->4-isomerase type 1 isoform X1"
                     /protein_id="XP_006501099.1"
                     /db_xref="GeneID:15492"
                     /db_xref="MGI:MGI:96233"
                     /translation="MAGWSCLVTGAGGFVGQRIIKMLVQEKELQEVRALDKVFRPETK
                     EEFSKLQTKTKVTVLEGDILDAQCLRRACQGISVVIHTAAVIDVTGVIPRQTILDVNL
                     KGTQNLLEACVQASVPAFIFCSSVDVAGPNSYKKIVLNGHEEQNHESTWSDPYPYSKK
                     MAEKAVLAANGSMLKNGGTLNTCALRPMYIYGERSPFIFNAIIRALKNKGILCVTGKF
                     SIANPVYVENVAWAHILAARGLRDPKKSTSIQGQFYYISDDTPHQSYDDLNYTLSKEW
                     GLRPNASWSLPLPLLYWLAFLLETVSFLLRPVYRYRPLFNRHLITLSNSTFTFSYKKA
                     QRDLGYEPLVNWEEAKQKTSEWIGTIVEQHREILDTKCQ"
ORIGIN      
        1 gtaatccttg aagctgcccc tgatcttttc agccaccacc atctcagact tttgagaggc
       61 ttttgctctc tcagttgtga ccatttccta cattctgaac tgagcggctg ctgcacagga
      121 ataaaggaca taaggtttat caatcactgg gaaggacaga ccacagaaaa gaataaatat
      181 ggtcacgaag caggcatgcg tcaagatatg ataagtcagc agactagaga ttaaaacact
      241 agtcctgatc tgagggctga ggagatcagc atccagacac tctcatctga cttttaacaa
      301 tttaacagcc ctcctaaggg ttaccctata tcataccagc tcccactgtc atctgtttcc
      361 tgtgttgacc atggctggat ggagctgcct ggtgacagga gcaggagggt ttgtgggcca
      421 gaggatcatc aagatgttgg tgcaggagaa agaactgcag gaggtcagag ctctggacaa
      481 agtattccga ccagaaacca aggaggaatt ctccaagctg cagacaaaga ccaaggtgac
      541 agtgttggaa ggagacattc tggatgccca gtgcctgagg agagcctgcc agggcatctc
      601 tgttgtcatc cacactgctg ctgtcattga tgtcacaggt gtcattccca ggcagaccat
      661 cctagatgtc aatctgaaag gtacccagaa cctattggag gcctgtgttc aagcaagtgt
      721 gccagccttc atcttctgca gctcagttga tgttgcaggg cccaactcgt acaagaagat
      781 cgtcctgaat ggccacgagg aacagaatca tgaaagcaca tggtctgatc catacccata
      841 cagcaaaaag atggctgaga aggcagtact ggcagccaat gggagcatgc tgaaaaatgg
      901 tggcactttg aatacttgtg ccttaagacc catgtacatt tatggggaga gaagtccatt
      961 catttttaat gcaataatta gggccctcaa aaataagggt attctgtgtg ttactggcaa
     1021 attctccata gccaacccag tatatgtgga aaatgtggcc tgggcacaca ttctggcagc
     1081 caggggcctt cgagacccca agaagtctac aagcatccaa ggacagttct actacatctc
     1141 agatgacacc cctcaccaaa gctatgatga tttaaattac accctgagta aggaatgggg
     1201 gctccgccct aatgccagct ggagccttcc tctgcccctg ctctactggc ttgccttcct
     1261 gctggaaact gtgagcttcc tgctacgtcc agtctacagg tatagacctc tctttaaccg
     1321 ccacttgatc acactgtcaa atagcacgtt cactttttct tacaagaaag ctcagcgaga
     1381 tctgggctat gagccacttg tcaactggga ggaagcaaag cagaaaacct cagagtggat
     1441 agggacaata gtggaacagc acagggagat attggacaca aagtgccagt gatggaaaaa
     1501 gggcaggtac atggctctgg gagttataag gtcctgtagc aagtacagag gcacaagcca
     1561 ggtcctgctg cctcctgtag acacagagac caacttggta tctttctcaa gtcaccagaa
     1621 gccttgccag tcactaaccc actcaca
//
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