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Arabidopsis thaliana myb domain protein 81 (MYB81), partial mRNA

NCBI Reference Sequence: NM_128253.2

FASTA Graphics 

LOCUS       NM_128253               1285 bp    mRNA    linear   PLN 20-OCT-2022
DEFINITION  Arabidopsis thaliana myb domain protein 81 (MYB81), partial mRNA.
ACCESSION   NM_128253
VERSION     NM_128253.2
DBLINK      BioProject: PRJNA116
            BioSample: SAMN03081427
KEYWORDS    RefSeq.
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 1285)
  AUTHORS   Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
            Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
            Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
            Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
            Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
            Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
            Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
            Venter,J.C.
  TITLE     Sequence and analysis of chromosome 2 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 402 (6763), 761-768 (1999)
   PUBMED   10617197
REFERENCE   2  (bases 1 to 1285)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 1285)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   4  (bases 1 to 1285)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
            This record is derived from an annotated genomic sequence
            (NC_003071).
            
            On Apr 18, 2007 this sequence version replaced NM_128253.1.
            COMPLETENESS: incomplete on the 3' end.
FEATURES             Location/Qualifiers
     source          1..1285
                     /organism="Arabidopsis thaliana"
                     /mol_type="mRNA"
                     /db_xref="taxon:3702"
                     /chromosome="2"
                     /ecotype="Columbia"
     gene            1..>1285
                     /gene="MYB81"
                     /locus_tag="AT2G26960"
                     /gene_synonym="AtMYB81; myb domain protein 81; T20P8.1;
                     T20P8_1"
                     /note="Member of the R2R3 factor gene family."
                     /db_xref="Araport:AT2G26960"
                     /db_xref="GeneID:817237"
                     /db_xref="TAIR:AT2G26960"
     CDS             2..1285
                     /gene="MYB81"
                     /locus_tag="AT2G26960"
                     /gene_synonym="AtMYB81; myb domain protein 81; T20P8.1;
                     T20P8_1"
                     /inference="Similar to RNA sequence, EST:INSD:DR751311.1"
                     /inference="similar to RNA sequence,
                     mRNA:INSD:AF062911.1,INSD:DQ446571.1"
                     /note="myb domain protein 81 (MYB81); FUNCTIONS IN: DNA
                     binding, sequence-specific DNA binding transcription
                     factor activity; INVOLVED IN: regulation of transcription,
                     DNA-dependent, regulation of transcription; CONTAINS
                     InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005),
                     Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding
                     (InterPro:IPR014778), HTH transcriptional regulator,
                     Myb-type, DNA-binding (InterPro:IPR017930),
                     Homeodomain-related (InterPro:IPR012287), Myb
                     transcription factor (InterPro:IPR015495); BEST
                     Arabidopsis thaliana protein match is: myb domain protein
                     104 (TAIR:AT2G26950.1); Has 8679 Blast hits to 8043
                     proteins in 475 species: Archae - 0; Bacteria - 0; Metazoa
                     - 712; Fungi - 479; Plants - 5750; Viruses - 3; Other
                     Eukaryotes - 1735 (source: NCBI BLink)."
                     /codon_start=1
                     /product="myb domain protein 81"
                     /protein_id="NP_180264.1"
                     /db_xref="Araport:AT2G26960"
                     /db_xref="GeneID:817237"
                     /db_xref="TAIR:AT2G26960"
                     /translation="MGKVRQDSGSDDDNSIKKSFTKGPWTQAEDNLLIAYVDKHGDGN
                     WNAVQNNSGLSRCGKSCRLRWVNHLRPDLKKGAFTEKEEKRVIELHALLGNKWARMAE
                     ELPGRTDNEIKNFWNTRLKRLQRLGLPVYPDEVREHAMNAATHSGLNTDSLDGHHSQE
                     YMEADTVEIPEVDFEHLPLNRSSSYYQSMLRHVPPTNVFVRQKPCFFQPPNVYNLIPP
                     SPYMSTGKRPREPETAFPCPGGYTMNEQSPRLWNYPFVENVSEQLPDSHLLGNAAYSS
                     PPGPLVHGVENFEFPSFQYHEEPGGWGADQPNPMPEHESDNTLVQSPLTAQTPSDCPS
                     SSLYDGLLESVVYGSSGEKPATDTDSESSLFQSFTPANENITGKTCFLTLYALHALHC
                     LCNQFKKSPLLHLHDKLNWCNKFRFNSFKSGTHIL"
ORIGIN      
        1 gatggggaaa gttcgtcaag attcaggatc agacgatgac aattcaataa agaaatcttt
       61 tactaaaggt ccttggacac aagcagaaga caatcttttg atagcttacg ttgataaaca
      121 tggtgatgga aactggaacg ctgttcaaaa caactcgggc ctttctcgtt gtggtaaaag
      181 ttgtcgcctt cgttgggtaa atcatctgag accagatttg aaaaaaggcg cttttacaga
      241 gaaagaagag aaacgtgtca tcgaacttca tgctttgtta gggaacaaat gggcacgaat
      301 ggctgaagaa ctaccgggac gaacagataa tgagatcaag aacttctgga atacaagact
      361 taagagactg caacgacttg gtttacctgt ttaccccgat gaagttcgag agcatgcgat
      421 gaatgcagcg acacattccg gtctaaacac tgattcattg gatggtcatc atagtcaaga
      481 atatatggag gcagatactg ttgagattcc tgaagtggat ttcgagcatt taccactcaa
      541 tcgatcttct tcatactacc agtcaatgct tcgacatgtt cctcccacta acgtctttgt
      601 gagacaaaaa ccgtgtttct ttcagccgcc taatgtgtat aacttgatac caccatctcc
      661 ttacatgtct accggaaaac gtcctagaga accagaaacc gcgtttcctt gcccgggtgg
      721 atataccatg aacgagcaaa gccctcggct ctggaactat ccttttgttg agaacgtttc
      781 agaacagtta ccggatagtc atttgcttgg taatgctgct tattcttctc ctcctggacc
      841 tcttgttcac ggggttgaga atttcgagtt cccttcattc caatatcatg aagagcctgg
      901 cggttgggga gcagatcaac ctaacccaat gccggaacat gagtcagata acactttggt
      961 tcaatctcct ctgacagctc aaacaccatc agattgtcca tcatcatcac tctatgatgg
     1021 actgttggaa tcagttgtct atggatcatc aggggagaaa ccggcaaccg ataccgattc
     1081 agaatcttca ctgtttcagt catttacacc agccaatgaa aacataaccg gtaaaacttg
     1141 ttttcttact ctttatgcat tacatgcact tcattgtttg tgtaatcaat tcaagaagtc
     1201 tcctcttctc catctgcatg acaaacttaa ttggtgtaac aaatttaggt tcaactcctt
     1261 caaatcaggg acacacatcc tttga
//
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