LOCUS NM_128253 1285 bp mRNA linear PLN 20-OCT-2022
DEFINITION Arabidopsis thaliana myb domain protein 81 (MYB81), partial mRNA.
ACCESSION NM_128253
VERSION NM_128253.2
DBLINK BioProject: PRJNA116
BioSample: SAMN03081427
KEYWORDS RefSeq.
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 1285)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 1285)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (19-OCT-2022) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 1285)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
REFERENCE 4 (bases 1 to 1285)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
COMMENT REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
This record is derived from an annotated genomic sequence
(NC_003071).
On Apr 18, 2007 this sequence version replaced NM_128253.1.
COMPLETENESS: incomplete on the 3' end.
FEATURES Location/Qualifiers
source 1..1285
/organism="Arabidopsis thaliana"
/mol_type="mRNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
gene 1..>1285
/gene="MYB81"
/locus_tag="AT2G26960"
/gene_synonym="AtMYB81; myb domain protein 81; T20P8.1;
T20P8_1"
/note="Member of the R2R3 factor gene family."
/db_xref="Araport:AT2G26960"
/db_xref="GeneID:817237"
/db_xref="TAIR:AT2G26960"
CDS 2..1285
/gene="MYB81"
/locus_tag="AT2G26960"
/gene_synonym="AtMYB81; myb domain protein 81; T20P8.1;
T20P8_1"
/inference="Similar to RNA sequence, EST:INSD:DR751311.1"
/inference="similar to RNA sequence,
mRNA:INSD:AF062911.1,INSD:DQ446571.1"
/note="myb domain protein 81 (MYB81); FUNCTIONS IN: DNA
binding, sequence-specific DNA binding transcription
factor activity; INVOLVED IN: regulation of transcription,
DNA-dependent, regulation of transcription; CONTAINS
InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005),
Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding
(InterPro:IPR014778), HTH transcriptional regulator,
Myb-type, DNA-binding (InterPro:IPR017930),
Homeodomain-related (InterPro:IPR012287), Myb
transcription factor (InterPro:IPR015495); BEST
Arabidopsis thaliana protein match is: myb domain protein
104 (TAIR:AT2G26950.1); Has 8679 Blast hits to 8043
proteins in 475 species: Archae - 0; Bacteria - 0; Metazoa
- 712; Fungi - 479; Plants - 5750; Viruses - 3; Other
Eukaryotes - 1735 (source: NCBI BLink)."
/codon_start=1
/product="myb domain protein 81"
/protein_id="NP_180264.1"
/db_xref="Araport:AT2G26960"
/db_xref="GeneID:817237"
/db_xref="TAIR:AT2G26960"
/translation="MGKVRQDSGSDDDNSIKKSFTKGPWTQAEDNLLIAYVDKHGDGN
WNAVQNNSGLSRCGKSCRLRWVNHLRPDLKKGAFTEKEEKRVIELHALLGNKWARMAE
ELPGRTDNEIKNFWNTRLKRLQRLGLPVYPDEVREHAMNAATHSGLNTDSLDGHHSQE
YMEADTVEIPEVDFEHLPLNRSSSYYQSMLRHVPPTNVFVRQKPCFFQPPNVYNLIPP
SPYMSTGKRPREPETAFPCPGGYTMNEQSPRLWNYPFVENVSEQLPDSHLLGNAAYSS
PPGPLVHGVENFEFPSFQYHEEPGGWGADQPNPMPEHESDNTLVQSPLTAQTPSDCPS
SSLYDGLLESVVYGSSGEKPATDTDSESSLFQSFTPANENITGKTCFLTLYALHALHC
LCNQFKKSPLLHLHDKLNWCNKFRFNSFKSGTHIL"
ORIGIN
1 gatggggaaa gttcgtcaag attcaggatc agacgatgac aattcaataa agaaatcttt
61 tactaaaggt ccttggacac aagcagaaga caatcttttg atagcttacg ttgataaaca
121 tggtgatgga aactggaacg ctgttcaaaa caactcgggc ctttctcgtt gtggtaaaag
181 ttgtcgcctt cgttgggtaa atcatctgag accagatttg aaaaaaggcg cttttacaga
241 gaaagaagag aaacgtgtca tcgaacttca tgctttgtta gggaacaaat gggcacgaat
301 ggctgaagaa ctaccgggac gaacagataa tgagatcaag aacttctgga atacaagact
361 taagagactg caacgacttg gtttacctgt ttaccccgat gaagttcgag agcatgcgat
421 gaatgcagcg acacattccg gtctaaacac tgattcattg gatggtcatc atagtcaaga
481 atatatggag gcagatactg ttgagattcc tgaagtggat ttcgagcatt taccactcaa
541 tcgatcttct tcatactacc agtcaatgct tcgacatgtt cctcccacta acgtctttgt
601 gagacaaaaa ccgtgtttct ttcagccgcc taatgtgtat aacttgatac caccatctcc
661 ttacatgtct accggaaaac gtcctagaga accagaaacc gcgtttcctt gcccgggtgg
721 atataccatg aacgagcaaa gccctcggct ctggaactat ccttttgttg agaacgtttc
781 agaacagtta ccggatagtc atttgcttgg taatgctgct tattcttctc ctcctggacc
841 tcttgttcac ggggttgaga atttcgagtt cccttcattc caatatcatg aagagcctgg
901 cggttgggga gcagatcaac ctaacccaat gccggaacat gagtcagata acactttggt
961 tcaatctcct ctgacagctc aaacaccatc agattgtcca tcatcatcac tctatgatgg
1021 actgttggaa tcagttgtct atggatcatc aggggagaaa ccggcaaccg ataccgattc
1081 agaatcttca ctgtttcagt catttacacc agccaatgaa aacataaccg gtaaaacttg
1141 ttttcttact ctttatgcat tacatgcact tcattgtttg tgtaatcaat tcaagaagtc
1201 tcctcttctc catctgcatg acaaacttaa ttggtgtaac aaatttaggt tcaactcctt
1261 caaatcaggg acacacatcc tttga
//