LOCUS BC131654 3582 bp mRNA linear ROD 30-JAN-2007
DEFINITION Mus musculus desmoglein 2, mRNA (cDNA clone MGC:150161
IMAGE:40110531), complete cds.
ACCESSION BC131654
VERSION BC131654.1
KEYWORDS MGC.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 3582)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3582)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-JAN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 28 Row: k Column: 4.
FEATURES Location/Qualifiers
source 1..3582
/organism="Mus musculus"
/mol_type="mRNA"
/db_xref="taxon:10090"
/clone="MGC:150161 IMAGE:40110531"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_284"
/note="Vector: pCR-Blunt II-TOPO; Clone identification
sequence tag: GTTCTAT sequenced from the reverse primer"
gene 1..3582
/gene="Dsg2"
/db_xref="GeneID:13511"
/db_xref="MGI:MGI:1196466"
CDS 146..3514
/gene="Dsg2"
/codon_start=1
/product="desmoglein 2"
/protein_id="AAI31655.1"
/db_xref="GeneID:13511"
/db_xref="MGI:MGI:1196466"
/translation="MARSPGDRCALLLLVQLLAVVCLDFGNGLHLEVFSPRNEGKPFP
KHTHLVRQKRAWITAPVALREGEDLSRKNPIAKIHSDLAEEKGIKITYKYTGKGITEP
PFGIFVFDRNTGELNITSILDREETPYFLLTGYALDSRGNNLEKPLELRIKVLDINDN
EPVFTQEVFVGSIEELSAAHTLVMKITATDADDPETLNAKVSYRIVSQEPANSHMFYL
NKDTGEIYTTSFTLDREEHSSYSLTVEARDGNGQITDKPVQQAQVQIRILDVNDNIPV
VENKMYEGTVEENQVNVEVMRIKVTDADEVGSDNWLANFTFASGNEGGYFHIETDTQT
NEGIVTLVKEVDYEEMKKLDLSIIVTNKAAFHKSILSKYKATPIPITVKVKNVVEGIH
FKSSVVSFRASEAMDRSSLSRSIGNFQVFDEDTGQAAKVTYVKVQDTDNWVSVDSVTS
EIKLVKIPDFESRYVQNGTYTAKVVAISKEHPQKTITGTIVITVEDVNDNCPVLVDSV
RSVCEDEPYVNVTAEDLDGAQNSAPFSFSIIDQPPGTAQKWKITHQESTSVLLQQSER
KRGRSEIPFLISDSQGFSCPERQVLQLTVCECLKGGGCVAAQYDNYVGLGPAAIALMI
LALLLLLLVPLLLLICHCGGGAKGFTPIPGTIEMLHPWNNEGAPPEDKVVPSLLVADH
AESSAVRGGVGGAMLKEGMMKGSSSASVTKGQHELSEVDGRWEEHRSLLTAGATHHVR
TAGTIAANEAVRTRATGSSRDMSGARGAVAVNEEFLRSYFTEKAASYNGEDDLHMAKD
CLLVYSQEDTASLRGSVGCCSFIEGELDDLFLDDLGLKFKTLAEVCLGRKIDLDVDIE
QRQKPVREASVSAASGSHYEQAVTSSESAYSSNTGFPAPKPLHEVHTEKVTQEIVTES
SVSSRQSQKVVPPPDPVASGNIIVTETSYAKGSAVPPSTVLLAPRQPQSLIVTERVYA
PTSTLVDQHYANEEKVLVTERVIQPNGGIPKPLEVTQHLKDAQYVMVRERESILAPSS
GVQPTLAMPSVAAGGQNVTVTERILTPASTLQSSYQIPSETSITARNTVLSSVGSIGP
LPNLDLEESDRPNSTITTSSTRVTKHSTMQHSYS"
ORIGIN
1 ggctaccctt tctgacccgg gcacacctgg aaccgcaccc cgggtcccgc agagtcagag
61 aagggcggcc ccgggaggga cctgcccagg aggatccgca gggcgccggc gaggcccgga
121 ggcgagggcg cggcggatcg aggcgatggc gcggagcccg ggtgaccggt gcgccctgct
181 gctgctggtg cagctgctgg cggtggtctg cttggacttt ggaaacggac ttcacttaga
241 ggtcttcagc ccaagaaatg aaggcaaacc gttccctaag cacactcact tggttcgtca
301 aaagagggcc tggatcactg cccctgtggc tctgcgggag ggcgaagacc tgtccagaaa
361 gaacccgatt gccaagatac actctgacct tgcagaagaa aaagggataa aaatcacgta
421 caagtacact gggaagggaa ttacagaacc gcctttcggc atattcgtct ttgatagaaa
481 cacaggagaa ctgaacatca ctagcattct tgaccgggaa gaaacaccat attttctgct
541 gacaggctat gcattggact ccagaggaaa caacctggaa aagcccttgg aactacgcat
601 caaagttctg gacatcaatg acaacgagcc agtgttcaca caggaggtct ttgttgggtc
661 cattgaggaa ttgagtgcag cacatacact tgtgatgaaa atcaccgcca cagatgcaga
721 tgacccggag actctgaatg ctaaagtctc ctacagaatt gtctctcagg agcctgcaaa
781 tagtcatatg ttctacctaa ataaagacac gggggagatc tatacgacca gttttacttt
841 ggacagagag gaacacagca gctattcctt gacggtggaa gcaagagatg gtaacgggca
901 gataacagac aagccagtcc agcaagctca agttcagatc cgtatattgg atgtcaatga
961 caatatacct gtggtagaaa acaaaatgta tgaggggaca gtggaagaaa accaggtcaa
1021 tgtagaagtc atgcggatca aagtgaccga tgcagatgaa gtgggctctg ataactggct
1081 agcaaacttt acatttgcat caggaaatga agggggctat ttccacattg agactgacac
1141 acagactaat gaagggattg tgacccttgt caaggaagtg gactatgaag aaatgaagaa
1201 gctagacttg agcatcattg tcactaacaa agcagctttc cacaagtcca ttctgagcaa
1261 gtacaaggcc acgcccattc ccatcactgt caaggtcaag aacgtggttg aaggcattca
1321 tttcaagagc agcgtagtct ctttccgagc tagtgaggca atggatagat ccagcctcag
1381 caggtcgatt ggaaattttc aagtttttga tgaagacact ggtcaagcag ctaaagtaac
1441 atatgtaaaa gtgcaagaca ctgacaactg ggtctctgtg gactccgtca cttcagagat
1501 taagcttgta aagattcctg actttgaatc tagatatgtc caaaatggta cctacactgc
1561 aaaggttgtg gccatatcca aagaacatcc tcaaaaaacc atcactggca ccatcgttat
1621 cactgttgaa gacgtcaatg acaattgtcc cgtgctggtg gactctgtac ggagtgtctg
1681 tgaggatgaa ccatatgtga atgtcactgc agaggatttg gatggggccc agaacagtgc
1741 gccattcagc ttctccatca ttgaccagcc tcctggaacg gcacagaagt ggaaaataac
1801 gcaccaggaa agtaccagtg tgctgctgca gcagagcgag cggaaacgcg ggagaagtga
1861 gattcccttc ctcatttccg acagccaggg cttcagctgc cccgaaaggc aggtccttca
1921 gctcactgta tgcgagtgtc tgaagggcgg tggctgtgtg gctgcacagt atgacaacta
1981 cgtcgggttg ggccctgccg ccatcgctct catgattcta gcactcctgc tcctgctcct
2041 ggtgccgctc ttgctgttga tatgccactg tggagggggc gccaaaggct tcacccccat
2101 tcctgggaca atagagatgc tgcacccttg gaataatgaa ggggcacctc ctgaggacaa
2161 ggtggtgcca tcgcttctgg tggccgatca tgcagagagc tcggcagtga gaggcggcgt
2221 aggaggtgcg atgctcaagg aaggcatgat gaaaggcagc agctcagctt ccgttaccaa
2281 agggcagcat gagctgtctg aggttgacgg aagatgggaa gaacacagaa gcctcctcac
2341 cgctggggcc actcaccatg taaggacagc aggaaccatc gctgccaacg aagccgtaag
2401 gacaagagcc acggggtctt ccagagacat gagtggggct cgaggagccg ttgccgtgaa
2461 tgaggaattc ttaagaagtt acttcacaga gaaagcggcc tcctacaatg gggaagacga
2521 ccttcacatg gccaaagact gccttctcgt ttactctcag gaagacacgg cctccctccg
2581 aggctcggtc gggtgctgca gtttcatcga gggagaactc gatgacctgt tcctggatga
2641 tcttggcctt aaattcaaga ccctagctga agtttgccta ggtcgaaaga tcgatctgga
2701 tgtggacatt gaacagaggc agaagccggt cagagaagcg agcgtgagtg cagcttctgg
2761 ctcgcactat gagcaagcgg taaccagctc agagagcgcg tactcctcta acaccggctt
2821 ccccgccccc aaacctctgc acgaagtgca cacagagaaa gtcacacagg aaatcgtcac
2881 tgagagctct gtatcttcca ggcagagtca gaaggtagta ccgccacctg atcctgtggc
2941 ttctggtaat attatagtga cggaaacttc ctatgccaaa ggctcagcag tgccacccag
3001 cactgtgctc ctggctccca gacagccaca gagcctgatc gtgacagaga gggtgtatgc
3061 tccaacctcc accttggtgg atcagcatta tgccaatgaa gaaaaagtcc ttgttaccga
3121 acgagtgatc cagcctaatg ggggcatccc taagcccctt gaggtcaccc agcatctgaa
3181 agatgcacag tatgtaatgg tgagggaaag agagagcatc cttgctccca gctcaggcgt
3241 gcagcccact ctggcaatgc ccagcgtggc agcaggagga cagaatgtca ccgtgacaga
3301 aagaatacta actcctgctt ccactctgca gtccagctac cagattccca gtgaaacctc
3361 catcacggct aggaacactg tgctctctag tgtgggaagc ataggtcctc tgcccaattt
3421 agatctagag gaatctgatc gtcccaattc tactataacc acatcttcca ccagggtcac
3481 caagcatagc accatgcaac attcttactc ctaaagagaa gccagccgca gtcggatctg
3541 gaccttaact agcatccact ggatgtgtgt gtccatgccc ca
//