U.S. flag

An official website of the United States government

Mus musculus desmoglein 2, mRNA (cDNA clone MGC:150161 IMAGE:40110531), complete cds

GenBank: BC131654.1

FASTA Graphics 

LOCUS       BC131654                3582 bp    mRNA    linear   ROD 30-JAN-2007
DEFINITION  Mus musculus desmoglein 2, mRNA (cDNA clone MGC:150161
            IMAGE:40110531), complete cds.
ACCESSION   BC131654
VERSION     BC131654.1
KEYWORDS    MGC.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3582)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 3582)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (29-JAN-2007) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Baylor Human Genome Sequencing Center
            cDNA Library Preparation: Baylor Human Genome Sequencing Center
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAM Plate: 28 Row: k Column: 4.
FEATURES             Location/Qualifiers
     source          1..3582
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /clone="MGC:150161 IMAGE:40110531"
                     /tissue_type="PCR rescued clones"
                     /clone_lib="NIH_MGC_284"
                     /note="Vector: pCR-Blunt II-TOPO; Clone identification
                     sequence tag: GTTCTAT sequenced from the reverse primer"
     gene            1..3582
                     /gene="Dsg2"
                     /db_xref="GeneID:13511"
                     /db_xref="MGI:MGI:1196466"
     CDS             146..3514
                     /gene="Dsg2"
                     /codon_start=1
                     /product="desmoglein 2"
                     /protein_id="AAI31655.1"
                     /db_xref="GeneID:13511"
                     /db_xref="MGI:MGI:1196466"
                     /translation="MARSPGDRCALLLLVQLLAVVCLDFGNGLHLEVFSPRNEGKPFP
                     KHTHLVRQKRAWITAPVALREGEDLSRKNPIAKIHSDLAEEKGIKITYKYTGKGITEP
                     PFGIFVFDRNTGELNITSILDREETPYFLLTGYALDSRGNNLEKPLELRIKVLDINDN
                     EPVFTQEVFVGSIEELSAAHTLVMKITATDADDPETLNAKVSYRIVSQEPANSHMFYL
                     NKDTGEIYTTSFTLDREEHSSYSLTVEARDGNGQITDKPVQQAQVQIRILDVNDNIPV
                     VENKMYEGTVEENQVNVEVMRIKVTDADEVGSDNWLANFTFASGNEGGYFHIETDTQT
                     NEGIVTLVKEVDYEEMKKLDLSIIVTNKAAFHKSILSKYKATPIPITVKVKNVVEGIH
                     FKSSVVSFRASEAMDRSSLSRSIGNFQVFDEDTGQAAKVTYVKVQDTDNWVSVDSVTS
                     EIKLVKIPDFESRYVQNGTYTAKVVAISKEHPQKTITGTIVITVEDVNDNCPVLVDSV
                     RSVCEDEPYVNVTAEDLDGAQNSAPFSFSIIDQPPGTAQKWKITHQESTSVLLQQSER
                     KRGRSEIPFLISDSQGFSCPERQVLQLTVCECLKGGGCVAAQYDNYVGLGPAAIALMI
                     LALLLLLLVPLLLLICHCGGGAKGFTPIPGTIEMLHPWNNEGAPPEDKVVPSLLVADH
                     AESSAVRGGVGGAMLKEGMMKGSSSASVTKGQHELSEVDGRWEEHRSLLTAGATHHVR
                     TAGTIAANEAVRTRATGSSRDMSGARGAVAVNEEFLRSYFTEKAASYNGEDDLHMAKD
                     CLLVYSQEDTASLRGSVGCCSFIEGELDDLFLDDLGLKFKTLAEVCLGRKIDLDVDIE
                     QRQKPVREASVSAASGSHYEQAVTSSESAYSSNTGFPAPKPLHEVHTEKVTQEIVTES
                     SVSSRQSQKVVPPPDPVASGNIIVTETSYAKGSAVPPSTVLLAPRQPQSLIVTERVYA
                     PTSTLVDQHYANEEKVLVTERVIQPNGGIPKPLEVTQHLKDAQYVMVRERESILAPSS
                     GVQPTLAMPSVAAGGQNVTVTERILTPASTLQSSYQIPSETSITARNTVLSSVGSIGP
                     LPNLDLEESDRPNSTITTSSTRVTKHSTMQHSYS"
ORIGIN      
        1 ggctaccctt tctgacccgg gcacacctgg aaccgcaccc cgggtcccgc agagtcagag
       61 aagggcggcc ccgggaggga cctgcccagg aggatccgca gggcgccggc gaggcccgga
      121 ggcgagggcg cggcggatcg aggcgatggc gcggagcccg ggtgaccggt gcgccctgct
      181 gctgctggtg cagctgctgg cggtggtctg cttggacttt ggaaacggac ttcacttaga
      241 ggtcttcagc ccaagaaatg aaggcaaacc gttccctaag cacactcact tggttcgtca
      301 aaagagggcc tggatcactg cccctgtggc tctgcgggag ggcgaagacc tgtccagaaa
      361 gaacccgatt gccaagatac actctgacct tgcagaagaa aaagggataa aaatcacgta
      421 caagtacact gggaagggaa ttacagaacc gcctttcggc atattcgtct ttgatagaaa
      481 cacaggagaa ctgaacatca ctagcattct tgaccgggaa gaaacaccat attttctgct
      541 gacaggctat gcattggact ccagaggaaa caacctggaa aagcccttgg aactacgcat
      601 caaagttctg gacatcaatg acaacgagcc agtgttcaca caggaggtct ttgttgggtc
      661 cattgaggaa ttgagtgcag cacatacact tgtgatgaaa atcaccgcca cagatgcaga
      721 tgacccggag actctgaatg ctaaagtctc ctacagaatt gtctctcagg agcctgcaaa
      781 tagtcatatg ttctacctaa ataaagacac gggggagatc tatacgacca gttttacttt
      841 ggacagagag gaacacagca gctattcctt gacggtggaa gcaagagatg gtaacgggca
      901 gataacagac aagccagtcc agcaagctca agttcagatc cgtatattgg atgtcaatga
      961 caatatacct gtggtagaaa acaaaatgta tgaggggaca gtggaagaaa accaggtcaa
     1021 tgtagaagtc atgcggatca aagtgaccga tgcagatgaa gtgggctctg ataactggct
     1081 agcaaacttt acatttgcat caggaaatga agggggctat ttccacattg agactgacac
     1141 acagactaat gaagggattg tgacccttgt caaggaagtg gactatgaag aaatgaagaa
     1201 gctagacttg agcatcattg tcactaacaa agcagctttc cacaagtcca ttctgagcaa
     1261 gtacaaggcc acgcccattc ccatcactgt caaggtcaag aacgtggttg aaggcattca
     1321 tttcaagagc agcgtagtct ctttccgagc tagtgaggca atggatagat ccagcctcag
     1381 caggtcgatt ggaaattttc aagtttttga tgaagacact ggtcaagcag ctaaagtaac
     1441 atatgtaaaa gtgcaagaca ctgacaactg ggtctctgtg gactccgtca cttcagagat
     1501 taagcttgta aagattcctg actttgaatc tagatatgtc caaaatggta cctacactgc
     1561 aaaggttgtg gccatatcca aagaacatcc tcaaaaaacc atcactggca ccatcgttat
     1621 cactgttgaa gacgtcaatg acaattgtcc cgtgctggtg gactctgtac ggagtgtctg
     1681 tgaggatgaa ccatatgtga atgtcactgc agaggatttg gatggggccc agaacagtgc
     1741 gccattcagc ttctccatca ttgaccagcc tcctggaacg gcacagaagt ggaaaataac
     1801 gcaccaggaa agtaccagtg tgctgctgca gcagagcgag cggaaacgcg ggagaagtga
     1861 gattcccttc ctcatttccg acagccaggg cttcagctgc cccgaaaggc aggtccttca
     1921 gctcactgta tgcgagtgtc tgaagggcgg tggctgtgtg gctgcacagt atgacaacta
     1981 cgtcgggttg ggccctgccg ccatcgctct catgattcta gcactcctgc tcctgctcct
     2041 ggtgccgctc ttgctgttga tatgccactg tggagggggc gccaaaggct tcacccccat
     2101 tcctgggaca atagagatgc tgcacccttg gaataatgaa ggggcacctc ctgaggacaa
     2161 ggtggtgcca tcgcttctgg tggccgatca tgcagagagc tcggcagtga gaggcggcgt
     2221 aggaggtgcg atgctcaagg aaggcatgat gaaaggcagc agctcagctt ccgttaccaa
     2281 agggcagcat gagctgtctg aggttgacgg aagatgggaa gaacacagaa gcctcctcac
     2341 cgctggggcc actcaccatg taaggacagc aggaaccatc gctgccaacg aagccgtaag
     2401 gacaagagcc acggggtctt ccagagacat gagtggggct cgaggagccg ttgccgtgaa
     2461 tgaggaattc ttaagaagtt acttcacaga gaaagcggcc tcctacaatg gggaagacga
     2521 ccttcacatg gccaaagact gccttctcgt ttactctcag gaagacacgg cctccctccg
     2581 aggctcggtc gggtgctgca gtttcatcga gggagaactc gatgacctgt tcctggatga
     2641 tcttggcctt aaattcaaga ccctagctga agtttgccta ggtcgaaaga tcgatctgga
     2701 tgtggacatt gaacagaggc agaagccggt cagagaagcg agcgtgagtg cagcttctgg
     2761 ctcgcactat gagcaagcgg taaccagctc agagagcgcg tactcctcta acaccggctt
     2821 ccccgccccc aaacctctgc acgaagtgca cacagagaaa gtcacacagg aaatcgtcac
     2881 tgagagctct gtatcttcca ggcagagtca gaaggtagta ccgccacctg atcctgtggc
     2941 ttctggtaat attatagtga cggaaacttc ctatgccaaa ggctcagcag tgccacccag
     3001 cactgtgctc ctggctccca gacagccaca gagcctgatc gtgacagaga gggtgtatgc
     3061 tccaacctcc accttggtgg atcagcatta tgccaatgaa gaaaaagtcc ttgttaccga
     3121 acgagtgatc cagcctaatg ggggcatccc taagcccctt gaggtcaccc agcatctgaa
     3181 agatgcacag tatgtaatgg tgagggaaag agagagcatc cttgctccca gctcaggcgt
     3241 gcagcccact ctggcaatgc ccagcgtggc agcaggagga cagaatgtca ccgtgacaga
     3301 aagaatacta actcctgctt ccactctgca gtccagctac cagattccca gtgaaacctc
     3361 catcacggct aggaacactg tgctctctag tgtgggaagc ataggtcctc tgcccaattt
     3421 agatctagag gaatctgatc gtcccaattc tactataacc acatcttcca ccagggtcac
     3481 caagcatagc accatgcaac attcttactc ctaaagagaa gccagccgca gtcggatctg
     3541 gaccttaact agcatccact ggatgtgtgt gtccatgccc ca
//
Feature
Display: FASTA GenBank Help
Details

Supplemental Content

Change region shown

Customize view

Reference sequence information

  • RefSeq mRNA
    See reference mRNA sequence for the Dsg2 gene (NM_007883.4).

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
External link. Please review our privacy policy.