LOCUS NM_124550 2291 bp mRNA linear PLN 20-OCT-2022
DEFINITION Arabidopsis thaliana K+ efflux antiporter 5 (KEA5), mRNA.
ACCESSION NM_124550
VERSION NM_124550.2
DBLINK BioProject: PRJNA116
BioSample: SAMN03081427
KEYWORDS RefSeq.
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 2291)
AUTHORS Tabata,S., Kaneko,T., Nakamura,Y., Kotani,H., Kato,T., Asamizu,E.,
Miyajima,N., Sasamoto,S., Kimura,T., Hosouchi,T., Kawashima,K.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Naruo,K., Okumura,S., Shinpo,S., Takeuchi,C., Wada,T.,
Watanabe,A., Yamada,M., Yasuda,M., Sato,S., de la Bastide,M.,
Huang,E., Spiegel,L., Gnoj,L., O'Shaughnessy,A., Preston,R.,
Habermann,K., Murray,J., Johnson,D., Rohlfing,T., Nelson,J.,
Stoneking,T., Pepin,K., Spieth,J., Sekhon,M., Armstrong,J.,
Becker,M., Belter,E., Cordum,H., Cordes,M., Courtney,L.,
Courtney,W., Dante,M., Du,H., Edwards,J., Fryman,J., Haakensen,B.,
Lamar,E., Latreille,P., Leonard,S., Meyer,R., Mulvaney,E.,
Ozersky,P., Riley,A., Strowmatt,C., Wagner-McPherson,C., Wollam,A.,
Yoakum,M., Bell,M., Dedhia,N., Parnell,L., Shah,R., Rodriguez,M.,
See,L.H., Vil,D., Baker,J., Kirchoff,K., Toth,K., King,L.,
Bahret,A., Miller,B., Marra,M., Martienssen,R., McCombie,W.R.,
Wilson,R.K., Murphy,G., Bancroft,I., Volckaert,G., Wambutt,R.,
Dusterhoft,A., Stiekema,W., Pohl,T., Entian,K.D., Terryn,N.,
Hartley,N., Bent,E., Johnson,S., Langham,S.A., McCullagh,B.,
Robben,J., Grymonprez,B., Zimmermann,W., Ramsperger,U., Wedler,H.,
Balke,K., Wedler,E., Peters,S., van Staveren,M., Dirkse,W.,
Mooijman,P., Lankhorst,R.K., Weitzenegger,T., Bothe,G., Rose,M.,
Hauf,J., Berneiser,S., Hempel,S., Feldpausch,M., Lamberth,S.,
Villarroel,R., Gielen,J., Ardiles,W., Bents,O., Lemcke,K.,
Kolesov,G., Mayer,K., Rudd,S., Schoof,H., Schueller,C.,
Zaccaria,P., Mewes,H.W., Bevan,M. and Fransz,P.
CONSRTM Kazusa DNA Research Institute; Cold Spring Harbor and Washington
University in St Louis Sequencing Consortium; European Union
Arabidopsis Genome Sequencing Consortium
TITLE Sequence and analysis of chromosome 5 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 823-826 (2000)
PUBMED 11130714
REFERENCE 2 (bases 1 to 2291)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (19-OCT-2022) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 2291)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
REFERENCE 4 (bases 1 to 2291)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
COMMENT REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
This record is derived from an annotated genomic sequence
(NC_003076).
On Sep 12, 2016 this sequence version replaced NM_124550.1.
FEATURES Location/Qualifiers
source 1..2291
/organism="Arabidopsis thaliana"
/mol_type="mRNA"
/db_xref="taxon:3702"
/chromosome="5"
/ecotype="Columbia"
gene 1..2291
/gene="KEA5"
/locus_tag="AT5G51710"
/gene_synonym="ARABIDOPSIS THALIANA K+ EFFLUX ANTIPORTER
5; ATKEA5; K+ efflux antiporter 5; MIO24.16; MIO24_16"
/note="member of Putative potassium proton antiporter
family"
/db_xref="Araport:AT5G51710"
/db_xref="GeneID:835245"
/db_xref="TAIR:AT5G51710"
CDS 270..1976
/gene="KEA5"
/locus_tag="AT5G51710"
/gene_synonym="ARABIDOPSIS THALIANA K+ EFFLUX ANTIPORTER
5; ATKEA5; K+ efflux antiporter 5; MIO24.16; MIO24_16"
/inference="Similar to RNA sequence,
EST:INSD:BP635850.1,INSD:DR279599.1,INSD:DR380095.1,
INSD:BP858326.1,INSD:ES027460.1,INSD:AV829168.1,
INSD:DR279597.1,INSD:DR287084.1,INSD:EL265613.1,
INSD:BP626465.1,INSD:ES080263.1,INSD:DR279596.1,
INSD:AV804739.1,INSD:DR279598.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY084820.1,INSD:AY070064.1"
/note="K+ efflux antiporter 5 (KEA5); FUNCTIONS IN:
potassium:hydrogen antiporter activity, potassium ion
transmembrane transporter activity; INVOLVED IN: potassium
ion transport, cation transport, transmembrane transport;
LOCATED IN: endomembrane system, integral to membrane;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15
growth stages; CONTAINS InterPro DOMAIN/s: Cation/H+
exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana
protein match is: K+ efflux antiporter 6
(TAIR:AT5G11800.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink)."
/codon_start=1
/product="K+ efflux antiporter 5"
/protein_id="NP_568763.1"
/db_xref="GeneID:835245"
/db_xref="TAIR:AT5G51710"
/db_xref="Araport:AT5G51710"
/translation="MARFAVIGLTFLLLLGTSLSARSDEETRERFYGNVVNSTAPGNG
EGSIAKMFDRVLEKEFSENDSPEGSDGASFNSSVADQQAEIETVAKVTHEKGKRNDTQ
ENNGTRPFQLQDVFSLENEDSDDMTLIDKKNNVFVMSNKKSKYPILQVDLRLISDLVV
IIVFAAIGGIVFSCLGQPVIVGYLLAGSIIGPGGLKFISEMVQVETVAQFGVVFLLFA
LGLEFSMTKLKVVGPVAVLGGLLQIVLLMFLCGVTALLCGARLSEGIFVGAFLSMSST
AVVVKFLVERNSTSSLHGQVTIGILIFQDCVVGLLFALLPVLGGNSGLLQGIISMGKL
LLILSIYLTVASLLTWSFVPRFLKLMIQLSSQTNELYQLAAVAFCLLSAWCSDKLGLS
LELGSFVAGVMLSTTEFAQHTLEQVEPIRNLFAALFLSSIGMLINVHFLWNHVDILLA
SVILVIVIKTAIAAVVVKAFRYNMRISFHVGVLLAQIGEFAFVLLSRASNLHVIEGKM
YLLLLGTTALSLVTTPLLFKLIPSAMNLGVLLRWFPSENSSPNESLQEKASLIEVHNR
TK"
ORIGIN
1 gcaaaacgga ctagttctct tctctctcac gacgagactt taataagaac ccaaaacaag
61 ttcgcattga cacgtactac actaattaaa caacaactat taacaaccat tcaacacaaa
121 aactctttcc cattgattca atttcaaaat tttggatcta ataaaaccaa aactctcatt
181 aaaaaaaaaa ataaaaaaat caaatctgat ttctgaaacg tttttgattc gcgacgattc
241 ccaaattcct gggaaaatat ctctgatcga tggcgagatt cgcagtgatt ggattaacgt
301 tcctcctttt acttggtacg tccttatcag cgagatctga tgaagaaaca cgcgagcgat
361 tttacggcaa cgtcgtgaac tcgacggctc cgggaaacgg tgaaggaagt atcgctaaaa
421 tgttcgatcg agttctggag aaagaatttt ccgaaaacga ttcgcctgaa ggatctgatg
481 gagctagctt taacagcagt gttgctgatc aacaagctga aatagagact gttgctaaag
541 taactcatga gaagggcaaa agaaatgata cacaagaaaa taatggtacg agaccgtttc
601 aacttcaaga tgtgttttcc ctggagaatg aagattctga tgatatgact cttattgaca
661 agaagaataa tgtttttgtc atgtcaaaca agaaatctaa gtatccgata cttcaagtag
721 atttgagatt aatatcagat ttggtggtca ttattgtttt tgctgcaatt ggtggcatcg
781 tcttctcttg tcttggacaa ccggtcattg ttggatatct tcttgcgggg tcaatcattg
841 ggccaggagg attgaaattc attagtgaaa tggttcaggt tgaaaccgta gcacagtttg
901 gtgttgtttt ccttctgttt gctttgggtt tggaattctc aatgactaag ctgaaagtcg
961 ttggcccagt tgctgtcctt ggagggcttc ttcaaattgt cttactcatg tttttgtgtg
1021 gtgtaactgc cttgttgtgt ggagcaaggt tgtcagaggg tatttttgtt ggtgcctttt
1081 tatctatgtc atcaactgca gtggtggtaa agtttttggt agaacggaac agtacaagtt
1141 ctcttcatgg tcaagttact atagggatac ttatctttca ggactgtgtt gttggtttac
1201 tattcgcctt gcttccagtt ttgggtggta acagtggttt actacaagga attatatcaa
1261 tgggaaagct gctactgata ttgtccatat atctcactgt ggcatctcta ttaacgtggt
1321 catttgtacc tcgttttctg aagctaatga ttcaattatc atctcaaaca aatgaacttt
1381 accagttagc tgctgtggca ttctgcttac tatctgcatg gtgcagtgac aagctgggtc
1441 ttagtcttga gttgggatca tttgtggctg gcgttatgtt gtctacgact gaatttgctc
1501 aacatacact agagcaggtg gaaccaattc gtaatctgtt tgccgctctc tttctatcta
1561 gtatcgggat gctcattaat gttcactttc tatggaacca cgtggatatc cttctagcgt
1621 cggtgattct agtgatagtt attaagacag caattgcagc agtagttgtt aaggctttta
1681 ggtacaacat gaggatatct ttccatgtcg gggtactgct tgctcagatt ggagagttcg
1741 cctttgttct tctaagccga gcgtcaaacc tacacgtaat cgaggggaaa atgtatctac
1801 tccttttggg cacaactgct ctaagtctcg taacgactcc gttgctattc aagttaatac
1861 cgagtgcaat gaacctcggt gtcctgcttc gatggttccc ttctgagaac agttctccga
1921 acgagagttt gcaggagaaa gcatcattga tagaagtaca taacagaacc aagtgatctc
1981 tcttttgtac attgactgaa gatttaagaa gaaaaaacag attttgatcc gatatactca
2041 actaggaggc agaaaaaaca tttgaaactg accaaatcag atccaagact tgctttttgt
2101 attttcttaa ctctttattt tttgtaatat cgtatatatt tagtattcac taccttcttg
2161 tgtagttcaa gcgcttatag cttgttttac ttggtgtaaa cgttgtaacg atattagcct
2221 tatatgctgt tgtttcttta atgttcatca caaataagaa tctcaataga aaccacagag
2281 ttctataatt g
//