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Arabidopsis thaliana K+ efflux antiporter 5 (KEA5), mRNA

NCBI Reference Sequence: NM_124550.2

FASTA Graphics 

LOCUS       NM_124550               2291 bp    mRNA    linear   PLN 20-OCT-2022
DEFINITION  Arabidopsis thaliana K+ efflux antiporter 5 (KEA5), mRNA.
ACCESSION   NM_124550
VERSION     NM_124550.2
DBLINK      BioProject: PRJNA116
            BioSample: SAMN03081427
KEYWORDS    RefSeq.
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 2291)
  AUTHORS   Tabata,S., Kaneko,T., Nakamura,Y., Kotani,H., Kato,T., Asamizu,E.,
            Miyajima,N., Sasamoto,S., Kimura,T., Hosouchi,T., Kawashima,K.,
            Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
            Nakazaki,N., Naruo,K., Okumura,S., Shinpo,S., Takeuchi,C., Wada,T.,
            Watanabe,A., Yamada,M., Yasuda,M., Sato,S., de la Bastide,M.,
            Huang,E., Spiegel,L., Gnoj,L., O'Shaughnessy,A., Preston,R.,
            Habermann,K., Murray,J., Johnson,D., Rohlfing,T., Nelson,J.,
            Stoneking,T., Pepin,K., Spieth,J., Sekhon,M., Armstrong,J.,
            Becker,M., Belter,E., Cordum,H., Cordes,M., Courtney,L.,
            Courtney,W., Dante,M., Du,H., Edwards,J., Fryman,J., Haakensen,B.,
            Lamar,E., Latreille,P., Leonard,S., Meyer,R., Mulvaney,E.,
            Ozersky,P., Riley,A., Strowmatt,C., Wagner-McPherson,C., Wollam,A.,
            Yoakum,M., Bell,M., Dedhia,N., Parnell,L., Shah,R., Rodriguez,M.,
            See,L.H., Vil,D., Baker,J., Kirchoff,K., Toth,K., King,L.,
            Bahret,A., Miller,B., Marra,M., Martienssen,R., McCombie,W.R.,
            Wilson,R.K., Murphy,G., Bancroft,I., Volckaert,G., Wambutt,R.,
            Dusterhoft,A., Stiekema,W., Pohl,T., Entian,K.D., Terryn,N.,
            Hartley,N., Bent,E., Johnson,S., Langham,S.A., McCullagh,B.,
            Robben,J., Grymonprez,B., Zimmermann,W., Ramsperger,U., Wedler,H.,
            Balke,K., Wedler,E., Peters,S., van Staveren,M., Dirkse,W.,
            Mooijman,P., Lankhorst,R.K., Weitzenegger,T., Bothe,G., Rose,M.,
            Hauf,J., Berneiser,S., Hempel,S., Feldpausch,M., Lamberth,S.,
            Villarroel,R., Gielen,J., Ardiles,W., Bents,O., Lemcke,K.,
            Kolesov,G., Mayer,K., Rudd,S., Schoof,H., Schueller,C.,
            Zaccaria,P., Mewes,H.W., Bevan,M. and Fransz,P.
  CONSRTM   Kazusa DNA Research Institute; Cold Spring Harbor and Washington
            University in St Louis Sequencing Consortium; European Union
            Arabidopsis Genome Sequencing Consortium
  TITLE     Sequence and analysis of chromosome 5 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 408 (6814), 823-826 (2000)
   PUBMED   11130714
REFERENCE   2  (bases 1 to 2291)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 2291)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   4  (bases 1 to 2291)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
            This record is derived from an annotated genomic sequence
            (NC_003076).
            
            On Sep 12, 2016 this sequence version replaced NM_124550.1.
FEATURES             Location/Qualifiers
     source          1..2291
                     /organism="Arabidopsis thaliana"
                     /mol_type="mRNA"
                     /db_xref="taxon:3702"
                     /chromosome="5"
                     /ecotype="Columbia"
     gene            1..2291
                     /gene="KEA5"
                     /locus_tag="AT5G51710"
                     /gene_synonym="ARABIDOPSIS THALIANA K+ EFFLUX ANTIPORTER
                     5; ATKEA5; K+ efflux antiporter 5; MIO24.16; MIO24_16"
                     /note="member of Putative potassium proton antiporter
                     family"
                     /db_xref="Araport:AT5G51710"
                     /db_xref="GeneID:835245"
                     /db_xref="TAIR:AT5G51710"
     CDS             270..1976
                     /gene="KEA5"
                     /locus_tag="AT5G51710"
                     /gene_synonym="ARABIDOPSIS THALIANA K+ EFFLUX ANTIPORTER
                     5; ATKEA5; K+ efflux antiporter 5; MIO24.16; MIO24_16"
                     /inference="Similar to RNA sequence,
                     EST:INSD:BP635850.1,INSD:DR279599.1,INSD:DR380095.1,
                     INSD:BP858326.1,INSD:ES027460.1,INSD:AV829168.1,
                     INSD:DR279597.1,INSD:DR287084.1,INSD:EL265613.1,
                     INSD:BP626465.1,INSD:ES080263.1,INSD:DR279596.1,
                     INSD:AV804739.1,INSD:DR279598.1"
                     /inference="similar to RNA sequence,
                     mRNA:INSD:AY084820.1,INSD:AY070064.1"
                     /note="K+ efflux antiporter 5 (KEA5); FUNCTIONS IN:
                     potassium:hydrogen antiporter activity, potassium ion
                     transmembrane transporter activity; INVOLVED IN: potassium
                     ion transport, cation transport, transmembrane transport;
                     LOCATED IN: endomembrane system, integral to membrane;
                     EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15
                     growth stages; CONTAINS InterPro DOMAIN/s: Cation/H+
                     exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana
                     protein match is: K+ efflux antiporter 6
                     (TAIR:AT5G11800.1); Has 30201 Blast hits to 17322 proteins
                     in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
                     17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
                     Eukaryotes - 2996 (source: NCBI BLink)."
                     /codon_start=1
                     /product="K+ efflux antiporter 5"
                     /protein_id="NP_568763.1"
                     /db_xref="GeneID:835245"
                     /db_xref="TAIR:AT5G51710"
                     /db_xref="Araport:AT5G51710"
                     /translation="MARFAVIGLTFLLLLGTSLSARSDEETRERFYGNVVNSTAPGNG
                     EGSIAKMFDRVLEKEFSENDSPEGSDGASFNSSVADQQAEIETVAKVTHEKGKRNDTQ
                     ENNGTRPFQLQDVFSLENEDSDDMTLIDKKNNVFVMSNKKSKYPILQVDLRLISDLVV
                     IIVFAAIGGIVFSCLGQPVIVGYLLAGSIIGPGGLKFISEMVQVETVAQFGVVFLLFA
                     LGLEFSMTKLKVVGPVAVLGGLLQIVLLMFLCGVTALLCGARLSEGIFVGAFLSMSST
                     AVVVKFLVERNSTSSLHGQVTIGILIFQDCVVGLLFALLPVLGGNSGLLQGIISMGKL
                     LLILSIYLTVASLLTWSFVPRFLKLMIQLSSQTNELYQLAAVAFCLLSAWCSDKLGLS
                     LELGSFVAGVMLSTTEFAQHTLEQVEPIRNLFAALFLSSIGMLINVHFLWNHVDILLA
                     SVILVIVIKTAIAAVVVKAFRYNMRISFHVGVLLAQIGEFAFVLLSRASNLHVIEGKM
                     YLLLLGTTALSLVTTPLLFKLIPSAMNLGVLLRWFPSENSSPNESLQEKASLIEVHNR
                     TK"
ORIGIN      
        1 gcaaaacgga ctagttctct tctctctcac gacgagactt taataagaac ccaaaacaag
       61 ttcgcattga cacgtactac actaattaaa caacaactat taacaaccat tcaacacaaa
      121 aactctttcc cattgattca atttcaaaat tttggatcta ataaaaccaa aactctcatt
      181 aaaaaaaaaa ataaaaaaat caaatctgat ttctgaaacg tttttgattc gcgacgattc
      241 ccaaattcct gggaaaatat ctctgatcga tggcgagatt cgcagtgatt ggattaacgt
      301 tcctcctttt acttggtacg tccttatcag cgagatctga tgaagaaaca cgcgagcgat
      361 tttacggcaa cgtcgtgaac tcgacggctc cgggaaacgg tgaaggaagt atcgctaaaa
      421 tgttcgatcg agttctggag aaagaatttt ccgaaaacga ttcgcctgaa ggatctgatg
      481 gagctagctt taacagcagt gttgctgatc aacaagctga aatagagact gttgctaaag
      541 taactcatga gaagggcaaa agaaatgata cacaagaaaa taatggtacg agaccgtttc
      601 aacttcaaga tgtgttttcc ctggagaatg aagattctga tgatatgact cttattgaca
      661 agaagaataa tgtttttgtc atgtcaaaca agaaatctaa gtatccgata cttcaagtag
      721 atttgagatt aatatcagat ttggtggtca ttattgtttt tgctgcaatt ggtggcatcg
      781 tcttctcttg tcttggacaa ccggtcattg ttggatatct tcttgcgggg tcaatcattg
      841 ggccaggagg attgaaattc attagtgaaa tggttcaggt tgaaaccgta gcacagtttg
      901 gtgttgtttt ccttctgttt gctttgggtt tggaattctc aatgactaag ctgaaagtcg
      961 ttggcccagt tgctgtcctt ggagggcttc ttcaaattgt cttactcatg tttttgtgtg
     1021 gtgtaactgc cttgttgtgt ggagcaaggt tgtcagaggg tatttttgtt ggtgcctttt
     1081 tatctatgtc atcaactgca gtggtggtaa agtttttggt agaacggaac agtacaagtt
     1141 ctcttcatgg tcaagttact atagggatac ttatctttca ggactgtgtt gttggtttac
     1201 tattcgcctt gcttccagtt ttgggtggta acagtggttt actacaagga attatatcaa
     1261 tgggaaagct gctactgata ttgtccatat atctcactgt ggcatctcta ttaacgtggt
     1321 catttgtacc tcgttttctg aagctaatga ttcaattatc atctcaaaca aatgaacttt
     1381 accagttagc tgctgtggca ttctgcttac tatctgcatg gtgcagtgac aagctgggtc
     1441 ttagtcttga gttgggatca tttgtggctg gcgttatgtt gtctacgact gaatttgctc
     1501 aacatacact agagcaggtg gaaccaattc gtaatctgtt tgccgctctc tttctatcta
     1561 gtatcgggat gctcattaat gttcactttc tatggaacca cgtggatatc cttctagcgt
     1621 cggtgattct agtgatagtt attaagacag caattgcagc agtagttgtt aaggctttta
     1681 ggtacaacat gaggatatct ttccatgtcg gggtactgct tgctcagatt ggagagttcg
     1741 cctttgttct tctaagccga gcgtcaaacc tacacgtaat cgaggggaaa atgtatctac
     1801 tccttttggg cacaactgct ctaagtctcg taacgactcc gttgctattc aagttaatac
     1861 cgagtgcaat gaacctcggt gtcctgcttc gatggttccc ttctgagaac agttctccga
     1921 acgagagttt gcaggagaaa gcatcattga tagaagtaca taacagaacc aagtgatctc
     1981 tcttttgtac attgactgaa gatttaagaa gaaaaaacag attttgatcc gatatactca
     2041 actaggaggc agaaaaaaca tttgaaactg accaaatcag atccaagact tgctttttgt
     2101 attttcttaa ctctttattt tttgtaatat cgtatatatt tagtattcac taccttcttg
     2161 tgtagttcaa gcgcttatag cttgttttac ttggtgtaaa cgttgtaacg atattagcct
     2221 tatatgctgt tgtttcttta atgttcatca caaataagaa tctcaataga aaccacagag
     2281 ttctataatt g
//
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