LOCUS NM_120710 1639 bp mRNA linear PLN 20-OCT-2022
DEFINITION Arabidopsis thaliana uncharacterized protein (AT5G06270), mRNA.
ACCESSION NM_120710
VERSION NM_120710.3
DBLINK BioProject: PRJNA116
BioSample: SAMN03081427
KEYWORDS RefSeq.
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 1639)
AUTHORS Tabata,S., Kaneko,T., Nakamura,Y., Kotani,H., Kato,T., Asamizu,E.,
Miyajima,N., Sasamoto,S., Kimura,T., Hosouchi,T., Kawashima,K.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Naruo,K., Okumura,S., Shinpo,S., Takeuchi,C., Wada,T.,
Watanabe,A., Yamada,M., Yasuda,M., Sato,S., de la Bastide,M.,
Huang,E., Spiegel,L., Gnoj,L., O'Shaughnessy,A., Preston,R.,
Habermann,K., Murray,J., Johnson,D., Rohlfing,T., Nelson,J.,
Stoneking,T., Pepin,K., Spieth,J., Sekhon,M., Armstrong,J.,
Becker,M., Belter,E., Cordum,H., Cordes,M., Courtney,L.,
Courtney,W., Dante,M., Du,H., Edwards,J., Fryman,J., Haakensen,B.,
Lamar,E., Latreille,P., Leonard,S., Meyer,R., Mulvaney,E.,
Ozersky,P., Riley,A., Strowmatt,C., Wagner-McPherson,C., Wollam,A.,
Yoakum,M., Bell,M., Dedhia,N., Parnell,L., Shah,R., Rodriguez,M.,
See,L.H., Vil,D., Baker,J., Kirchoff,K., Toth,K., King,L.,
Bahret,A., Miller,B., Marra,M., Martienssen,R., McCombie,W.R.,
Wilson,R.K., Murphy,G., Bancroft,I., Volckaert,G., Wambutt,R.,
Dusterhoft,A., Stiekema,W., Pohl,T., Entian,K.D., Terryn,N.,
Hartley,N., Bent,E., Johnson,S., Langham,S.A., McCullagh,B.,
Robben,J., Grymonprez,B., Zimmermann,W., Ramsperger,U., Wedler,H.,
Balke,K., Wedler,E., Peters,S., van Staveren,M., Dirkse,W.,
Mooijman,P., Lankhorst,R.K., Weitzenegger,T., Bothe,G., Rose,M.,
Hauf,J., Berneiser,S., Hempel,S., Feldpausch,M., Lamberth,S.,
Villarroel,R., Gielen,J., Ardiles,W., Bents,O., Lemcke,K.,
Kolesov,G., Mayer,K., Rudd,S., Schoof,H., Schueller,C.,
Zaccaria,P., Mewes,H.W., Bevan,M. and Fransz,P.
CONSRTM Kazusa DNA Research Institute; Cold Spring Harbor and Washington
University in St Louis Sequencing Consortium; European Union
Arabidopsis Genome Sequencing Consortium
TITLE Sequence and analysis of chromosome 5 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 823-826 (2000)
PUBMED 11130714
REFERENCE 2 (bases 1 to 1639)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (19-OCT-2022) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 1639)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
REFERENCE 4 (bases 1 to 1639)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
COMMENT REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
This record is derived from an annotated genomic sequence
(NC_003076).
On Sep 12, 2016 this sequence version replaced NM_120710.2.
FEATURES Location/Qualifiers
source 1..1639
/organism="Arabidopsis thaliana"
/mol_type="mRNA"
/db_xref="taxon:3702"
/chromosome="5"
/ecotype="Columbia"
gene 1..1639
/locus_tag="AT5G06270"
/gene_synonym="MHF15.21; MHF15_21"
/db_xref="Araport:AT5G06270"
/db_xref="GeneID:830515"
/db_xref="TAIR:AT5G06270"
CDS 806..1174
/locus_tag="AT5G06270"
/gene_synonym="MHF15.21; MHF15_21"
/inference="Similar to RNA sequence,
EST:INSD:EL302615.1,INSD:EG452195.1,INSD:EL328064.1,
INSD:ES112520.1,INSD:DR264767.1,INSD:ES118727.1,
INSD:EL239590.1,INSD:EL310944.1,INSD:ES077838.1,
INSD:EH805929.1,INSD:EL285972.1,INSD:DR264769.1,
INSD:EH897477.1,INSD:EL235050.1,INSD:BP847261.1,
INSD:ES178323.1,INSD:EL264036.1,INSD:EH908486.1,
INSD:ES064067.1,INSD:EL056129.1,INSD:EL115988.1,
INSD:EL314177.1,INSD:DR378981.1,INSD:AU227510.1,
INSD:ES183780.1,INSD:EH830200.1,INSD:EH847424.1,
INSD:EL162087.1,INSD:ES059348.1,INSD:EL998373.1,
INSD:ES136070.1,INSD:DR264770.1,INSD:AU236558.1,
INSD:ES184166.1,INSD:ES116360.1,INSD:EH873180.1"
/inference="similar to RNA sequence,
mRNA:INSD:BX833304.1,INSD:BT003828.1,INSD:AY084326.1,
INSD:BT005129.1,INSD:BX830226.1"
/note="unknown protein; FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED
IN: chloroplast; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 11 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G11600.1); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink)."
/codon_start=1
/product="uncharacterized protein"
/protein_id="NP_196245.1"
/db_xref="GeneID:830515"
/db_xref="TAIR:AT5G06270"
/db_xref="Araport:AT5G06270"
/translation="MSRRSPKLELKLNLSPPTSSQRRMVRSPSRSATTSPTSPPSSCV
SSEMNQDEPSVRYSTSPETTSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHEN
ATNANANAAAASSGRKTRRN"
ORIGIN
1 gccaggaggt ggttcacttt atatatttgc attgtatttg ggttctctgt accaattctg
61 gtgtgttgcc atttaatttt gtttgtgttt ctttaatttc aatttaattt ctttgactgt
121 acatttttta ctttcgaaat tatgattttt cttcttcttc ttccaatttc aacttttatt
181 ataaacatct aattcaagtt ggttgcccat ttaatttctt ggttccatat attaactcct
241 atgaagaaaa taaaaataaa taatggttgt tctgttgagt atttaatttg atttctgtgt
301 attagccatt aaacacctct cttgttcttt tcctcctcct atttaataag caatgaattg
361 gattcctgca aatatctaca gattttcttg tgtatttatt aaaatacatt taagaaattt
421 aaattactgg tttgaagttg aaaaaagtaa ttagaattcg atactcttga ggcaaaaatt
481 aaatcaatta acgcaatctg atagtatgta tcgtctagta gtagtatact tcaattcaat
541 ctttatgatt ctctctctct cacacagtcc tttctcactc ataattaaat taagccttaa
601 tgaaaaatct atctatctcc tcctttaatt ttctctctgt gttctttctt gtatataaag
661 gcctaagctc aagcaatcca accaccagtg gtaataagag agaagactct tctttttttt
721 tggtagaaga agactcttct ttgtgataca agtaaccagt ctttgagatc acagaaaacc
781 tccttctcaa accgtaggtt tcaagatgag tcgaagaagt ccaaagctgg aactgaagtt
841 gaatctctcg ccgcctacgt caagccagag gaggatggtt cgatctccaa gccgctcagc
901 gacgacttca ccgacctcac ctccaagctc atgcgtctcg tcggagatga accaggacga
961 gccatctgtg agatactcga caagtccaga gactacctcg atggttcttg tcggatgtcc
1021 tcgttgtctc atgtacgtta tgctctcaga agacgaccct aaatgcccta aatgcaaaag
1081 caccgttctt cttgatttcc tccatgaaaa cgccacaaac gccaacgcaa acgcagccgc
1141 tgcttcctct ggtcgcaaga ctcgaaggaa ctgatgaagg accagtaaaa tcaaaatcct
1201 gttccttctt tatgttattt atttttcttt cgtttttttg cgaatgtagc tgttgttttt
1261 atgagagtag tgctaatcac gctccactct aaaacccgga gaagaaggta ggagaaggaa
1321 attagggttt ccctattcaa gaaaattttc aaaaagagtg gagcgcgaat agcactaact
1381 tttctttttc ttttctctca acatttttct accatttgag ttctctaatg gaagaagaat
1441 ttttaaatat atgtgaaaac atgtgtcatt gtcttcgtat tcctctactc tatctaattt
1501 ctcatactct gtttcggatg ctctgtttct agggcatctc tgttttttgg atgtgtttgt
1561 aaaaagaaaa tagaggtttt gtgtgtacga ctataacaaa agtagacatt cttagcgtag
1621 cagagagatt gcttacaca
//