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Arabidopsis thaliana Amidohydrolase family (LAF3), mRNA

NCBI Reference Sequence: NM_001339749.1

FASTA Graphics 

LOCUS       NM_001339749            2867 bp    mRNA    linear   PLN 20-OCT-2022
DEFINITION  Arabidopsis thaliana Amidohydrolase family (LAF3), mRNA.
ACCESSION   NM_001339749
VERSION     NM_001339749.1
DBLINK      BioProject: PRJNA116
            BioSample: SAMN03081427
KEYWORDS    RefSeq.
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 2867)
  AUTHORS   Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
            Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
            Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
            Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
            Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
            Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
            Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
            Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
            Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
            Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
            Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
            Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
            Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
            Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
            Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
            Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
            Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
            Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
            Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
            Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
            Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
            Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
            Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
            Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
            Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
            Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
            Yamada,M., Yasuda,M. and Tabata,S.
  CONSRTM   European Union Chromosome 3 Arabidopsis Sequencing Consortium;
            Institute for Genomic Research; Kazusa DNA Research Institute
  TITLE     Sequence and analysis of chromosome 3 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 408 (6814), 820-822 (2000)
   PUBMED   11130713
REFERENCE   2  (bases 1 to 2867)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 2867)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   4  (bases 1 to 2867)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
            This record is derived from an annotated genomic sequence
            (NC_003074).
FEATURES             Location/Qualifiers
     source          1..2867
                     /organism="Arabidopsis thaliana"
                     /mol_type="mRNA"
                     /db_xref="taxon:3702"
                     /chromosome="3"
                     /ecotype="Columbia"
     gene            1..2867
                     /gene="LAF3"
                     /locus_tag="AT3G55850"
                     /gene_synonym="LAF3 ISF1; LAF3 ISF2; LAF3 ISOFORM 2; LONG
                     AFTER FAR-RED 3; LONG AFTER FAR-RED 3 ISOFORM 1"
                     /note="Encodes a product that might regulate
                     nucleo-cytoplasmic trafficking of an intermediate(s)
                     involved in phyA signal transduction. Differs from isoform
                     2 only in the first few N-terminal amino acids."
                     /db_xref="Araport:AT3G55850"
                     /db_xref="GeneID:824751"
                     /db_xref="TAIR:AT3G55850"
     CDS             1191..2603
                     /gene="LAF3"
                     /locus_tag="AT3G55850"
                     /gene_synonym="LAF3 ISF1; LAF3 ISF2; LAF3 ISOFORM 2; LONG
                     AFTER FAR-RED 3; LONG AFTER FAR-RED 3 ISOFORM 1"
                     /codon_start=1
                     /product="Amidohydrolase family"
                     /protein_id="NP_001326016.1"
                     /db_xref="GeneID:824751"
                     /db_xref="Araport:AT3G55850"
                     /db_xref="TAIR:AT3G55850"
                     /translation="MCNKKKLDAKEGSWILGGGWNNDFWGGELPSASWIDEISPRNPV
                     WLIRMDGHMALANSLALKIAGVISLTEDPVGGTIMRMPSGEPTGLLIDAAMELVTPWV
                     KEISVDERREALFRASKYALTRGVTTVIDLGRYFPGTTDELSWKDFQDVYLYADSSKK
                     MMIRTCLFFPITTWSRLLDLKLQKGSVLSEWLYLGGVKAFIDGSLGSNSALFYEEYID
                     TPNNYGLEVMDPEKLSNFTMAADKSGLQVAIHAIGDKANDMILDMYESVAAANGDRDR
                     RFRIEHAQHLAPGSANRFGQLHIVASVQPDHLLDDADSVAKKLGSERAVKESYLFQSL
                     LNGNALLALGSDWPVCFRKSLHIYNVFTYSQTLLRLFSLQVADINPLHSIRTAVKRIP
                     PKWDHAWIPSERISFTDALIAQTISAARAAFLDHHLGSLSPGKLADFVILSTNSWDEF
                     SKDVSASVLATYVGGKQLYP"
ORIGIN      
        1 tgtggtgagc acaaagcgaa ctattctttc gccttttact aaagaatacc gtgtgctctc
       61 cacgctaagt ggcatacgcc tatttttgga gggatctcac ttcacagtgg gacccaacat
      121 ttacactagt ctgaaatctt aatgactcaa aactccgttt gttagttatt gggccttaag
      181 tttaatgagc taacgggctt taggctaatt taacggaatt gaatttaacc tgtaagttgg
      241 atttgttatt tgagagaaag ttcagcattg tatcaacttc cggttatgac cggttggtat
      301 gagtttccgg ttatgatcgg ttttgtttca ggtgggacga aatccacttc gtcatactgt
      361 agttgttgtt gtttctgttt taagaatttc tccggcgact gactatgaac ctcttcgtca
      421 tcgtttcagc tgccgtgttc ctccttatct ccgtcgcgta tcttcctttg ctcaacgact
      481 tatattggtc aactctcaag tctcttacac caccggctgg tatcgtggcg gatttgttag
      541 tgaccaatgg aacaatcttc accagcgata gctctttgcc ttttgccgat tccatggcga
      601 ttcgtaatgg caggattctt aaagttggaa gctttgccac tctcaagggt tttataggag
      661 atggaactat ggaggtgaat ctggagggga agattgtagt gcctggactt attgattcac
      721 atgttcatct gatttctggg ggattacagg tgataatggc atagtgcaaa cttatttctg
      781 tgttctttct tcttgcaatg atatgtaatt atgtatattg ttaagttaac ctgagattag
      841 atgattacat gccattgttt gatcaggttt agatatgaag aagtatacta tactctcgtt
      901 taccttatat cttttccttt tgcttttaat gtcttatcgc ttgagcatag atggcccaag
      961 ttggacttcg tggagtgagt caaaaagatg agttttgtaa aatggtgaag gacgctgtgc
     1021 agagtaatta atatttcatt attatatgaa caatcatatt gtggttacac ttctttattg
     1081 gtgtctgttt ttagttatga tttacagtgt acagtgtaca ttgaacattt tttgcttacg
     1141 ttggggttct tagtagtggg agagtattta aattactatg ctgcttttat atgtgtaaca
     1201 aaaaaaaatt agatgcaaaa gaaggctcat ggattttggg tggtggctgg aacaatgatt
     1261 tctggggagg agaattgccc tctgcatcat ggattgatga aatctcccct cgtaatcctg
     1321 tttggttgat taggatggat ggtcatatgg cattggcaaa ttcccttgcg ctcaagattg
     1381 ctggtgttat aagtttaacg gaagatccag ttggtggaac gataatgagg atgcctagtg
     1441 gcgagccgac aggacttttg atcgatgctg ctatggagct tgtcaccccc tgggttaaag
     1501 aaatctcagt ggatgaacgt agggaagcac tatttagagc tagcaaatat gctttgacta
     1561 gaggcgtgac aactgttatt gatcttggaa gatactttcc tggcaccaca gatgagctct
     1621 cctggaaaga ctttcaagat gtctatctat atgctgattc ctcgaagaag atgatgatac
     1681 ggacttgctt gttttttccc atcacaacgt ggtcacgttt attggatctt aagctgcaga
     1741 agggatctgt actgagtgaa tggttatatc tcggtggcgt caaagcattt attgatggct
     1801 ctctaggttc caacagtgca cttttttacg aggaatatat tgatacacct aataattatg
     1861 ggttagaagt gatggatcct gaaaaacttt ccaacttcac aatggcagca gacaaatcag
     1921 ggcttcaggt tgctatccat gctataggcg acaaagcaaa tgacatgatc cttgacatgt
     1981 acgaatccgt tgctgcagcc aatggagacc gagatagaag atttaggata gagcatgccc
     2041 aacatttggc accaggatca gccaaccggt tcggtcaact tcacattgtt gcttcagttc
     2101 agccagacca tttgcttgat gatgctgatt ctgttgctaa gaagctcggt tctgaaagag
     2161 ccgtaaagga gtcttatcta ttccaatctc tcttaaatgg caatgcactc ttggcacttg
     2221 gctcagactg gcctgtatgt tttcgaaaat ctctacacat atacaatgtt tttacatata
     2281 gtcaaacttt gcttcgtttg ttttccctcc aggtagcaga cattaacccg ttgcacagta
     2341 tcagaaccgc ggttaaaaga atacctccca agtgggatca cgcttggatt ccatctgaac
     2401 gcatctcttt tacggatgcg ctgattgcgc agacgatatc agcggcaaga gcagcgtttt
     2461 tggatcatca cttggggtct ttatctccag gaaaactagc agattttgtc atattgtcaa
     2521 caaattcttg ggatgagttc tcaaaagacg tttctgcatc agtgttagca acgtatgtag
     2581 gaggaaagca attgtatcca tgaatcatga tgatgcagtc tttatctaat taagaaacaa
     2641 actttacaca cttagagtat ctgatcattt atctgtttgt ctaggcgtta tcaatgtaca
     2701 tatgtatgac atctggctta tcaattagat atgcatttca tattcaagga aaatgtttgg
     2761 tgtgtcggcc aaaggaaata ggaaaaggtg gttgttggta tttgtattta ttgggatgca
     2821 aaaaggtaat gttggtgagt ggcccaagca cgagccaatg tcatgaa
//
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