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Arabidopsis thaliana Leucine-rich repeat protein kinase family protein (SUB), mRNA

NCBI Reference Sequence: NM_001331960.1

FASTA Graphics 

LOCUS       NM_001331960            2522 bp    mRNA    linear   PLN 20-OCT-2022
DEFINITION  Arabidopsis thaliana Leucine-rich repeat protein kinase family
            protein (SUB), mRNA.
ACCESSION   NM_001331960
VERSION     NM_001331960.1
DBLINK      BioProject: PRJNA116
            BioSample: SAMN03081427
KEYWORDS    RefSeq.
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 2522)
  AUTHORS   Theologis,A., Ecker,J.R., Palm,C.J., Federspiel,N.A., Kaul,S.,
            White,O., Alonso,J., Altafi,H., Araujo,R., Bowman,C.L.,
            Brooks,S.Y., Buehler,E., Chan,A., Chao,Q., Chen,H., Cheuk,R.F.,
            Chin,C.W., Chung,M.K., Conn,L., Conway,A.B., Conway,A.R.,
            Creasy,T.H., Dewar,K., Dunn,P., Etgu,P., Feldblyum,T.V., Feng,J.,
            Fong,B., Fujii,C.Y., Gill,J.E., Goldsmith,A.D., Haas,B.,
            Hansen,N.F., Hughes,B., Huizar,L., Hunter,J.L., Jenkins,J.,
            Johnson-Hopson,C., Khan,S., Khaykin,E., Kim,C.J., Koo,H.L.,
            Kremenetskaia,I., Kurtz,D.B., Kwan,A., Lam,B., Langin-Hooper,S.,
            Lee,A., Lee,J.M., Lenz,C.A., Li,J.H., Li,Y., Lin,X., Liu,S.X.,
            Liu,Z.A., Luros,J.S., Maiti,R., Marziali,A., Militscher,J.,
            Miranda,M., Nguyen,M., Nierman,W.C., Osborne,B.I., Pai,G.,
            Peterson,J., Pham,P.K., Rizzo,M., Rooney,T., Rowley,D., Sakano,H.,
            Salzberg,S.L., Schwartz,J.R., Shinn,P., Southwick,A.M., Sun,H.,
            Tallon,L.J., Tambunga,G., Toriumi,M.J., Town,C.D., Utterback,T.,
            Van Aken,S., Vaysberg,M., Vysotskaia,V.S., Walker,M., Wu,D., Yu,G.,
            Fraser,C.M., Venter,J.C. and Davis,R.W.
  TITLE     Sequence and analysis of chromosome 1 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 408 (6814), 816-820 (2000)
   PUBMED   11130712
REFERENCE   2  (bases 1 to 2522)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 2522)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-JUL-2017) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   4  (bases 1 to 2522)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   5  (bases 1 to 2522)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
            This record is derived from an annotated genomic sequence
            (NC_003070).
FEATURES             Location/Qualifiers
     source          1..2522
                     /organism="Arabidopsis thaliana"
                     /mol_type="mRNA"
                     /db_xref="taxon:3702"
                     /chromosome="1"
                     /ecotype="Columbia"
     gene            1..2522
                     /gene="SUB"
                     /locus_tag="AT1G11130"
                     /gene_synonym="AT1G11140; SCM; SCRAMBLED; SRF9;
                     STRUBBELIG; STRUBBELIG-RECEPTOR FAMILY 9; T19D16.8"
                     /note="Encodes a receptor-like kinase protein with a
                     predicted extracellular domain of six leucine-rich repeats
                     and an intracellular serine-threonine kinase domain
                     expressed throughout the developing root. Regulates
                     expression of GLABRA2, CAPRICE, WEREWOLF, and ENHANCER OF
                     GLABRA3. Required for floral organ shape, the development
                     of the outer integument of ovules, and stem development.
                     Regulates cell shape and cell division planes in the L2
                     layer of floral meristems and the L1-derived outer
                     integument of ovules. Controls specification of epidermal
                     root hairs. Participates in the coordination of cell
                     morphogenesis between cell layers during floral
                     development."
                     /db_xref="Araport:AT1G11130"
                     /db_xref="GeneID:837654"
                     /db_xref="TAIR:AT1G11130"
     CDS             178..2250
                     /gene="SUB"
                     /locus_tag="AT1G11130"
                     /gene_synonym="AT1G11140; SCM; SCRAMBLED; SRF9;
                     STRUBBELIG; STRUBBELIG-RECEPTOR FAMILY 9; T19D16.8"
                     /codon_start=1
                     /product="Leucine-rich repeat protein kinase family
                     protein"
                     /protein_id="NP_001321706.1"
                     /db_xref="Araport:AT1G11130"
                     /db_xref="GeneID:837654"
                     /db_xref="TAIR:AT1G11130"
                     /translation="MKVGGGLSDTLADFSSIQVMDFSSNHISGTIPQALPSSIRNLSL
                     SSNRFTGNIPFTLSFLSDLSELSLGSNLLSGEIPDYFQQLSKLTKLDLSSNILEGHLP
                     SSMGDLASLKILYLQDNKLTGTLDVIEDLFLTDLNVENNLFSGPIPPNLLKIPNFKKD
                     GTPFNTSIITPPPPPVVDPPPATHRAPPVPRIPPVSGVPPAPFAPFAPLQPQQHPPPS
                     PPLVWSPPSSDNGGGDPWNSVSGQPTLQISPPSGSGSGKFWSTQRIILVVSSVAIIVL
                     VSGLCVTLWRCCRSKIYNRYYSGARKDLQRPYFNKPPSQPTPTMGKVSREPMVKPFDG
                     YGAGDRKYGYPMPQRAEESRRAMPPTSYYNKDVNTPQKPLQQPPRQFQSNDTASKRAA
                     HFPPGLNSSSSATVFTIASLQQYTNNFSEENIIGEGSIGNVYRAELRHGKFLAVKKLS
                     NTINRTQSDGEFLNLVSNVLKLKRGHILELLGYCNEFGQRLLVYEYCPNGSLQDALHL
                     DRKLHKKLTWNVRINIALGASKALQFLHEVCQPPVVHQNFKSSKVLLDGKLSVRVADS
                     GLAYMLPPRPTSQMAGYAAPEVEYGSYTCQSDVFSLGVVMLELLTGRRPFDRTRPRGH
                     QTLAQWAIPRLHDIDALTRMVDPSLHGAYPMKSLSRFADIISRSLQMEPGFRPPISEI
                     VQDLQHMI"
ORIGIN      
        1 gatgtgtttg tctgttgttt aataacttct gcagtttcgg cgattaataa cttgtatatc
       61 actttgggag caccatctct acatcattgg cttgcttttg gaggagaccc ttgtggagaa
      121 aagtggcaag gtgtggtgtg tgactcctca aacatcacag aaataaggat acctggcatg
      181 aaggtaggtg gaggcttaag tgatactctg gctgattttt catctatcca agtcatggac
      241 ttcagtagca atcatatttc agggacaatt ccgcaggctt tgccttcttc catccgaaac
      301 ctatctctct caagcaatcg cttcactggg aacattccct ttacattgtc ctttctatcc
      361 gatttgtctg aactgtcatt gggaagcaat cttctatcag gagagatacc agattacttt
      421 cagcagctat caaaactgac aaaactggac ttatcgtcta acatactgga ggggcattta
      481 ccttcttcca tgggagactt agcttctctt aagatattgt atttgcagga caacaagctc
      541 acaggaacac ttgatgttat agaggatctt ttcttaaccg atttgaatgt agaaaacaac
      601 ttattctcgg gacctatacc gccaaatcta ttgaaaattc caaacttcaa aaaagatgga
      661 actccgttca atacatcgat tataacacca ccgcctccgc ctgtggttga tcctcctccc
      721 gctactcacc gtgctcctcc tgttccccgt atccctcctg tttctggtgt tcccccagca
      781 ccttttgctc cttttgctcc actgcaacca caacaacatc caccaccatc accacctctg
      841 gtctggtcac caccttcttc tgataatgga ggaggagatc cctggaactc tgtgtcaggg
      901 caacctacct tgcaaatatc acctccttca ggttcaggat caggaaaatt ctggtccact
      961 caaagaatca ttctagtagt ttcttcagtg gccataattg ttcttgtatc cggtttgtgt
     1021 gttacacttt ggagatgttg cagaagtaaa atatataacc gatattacag tggagctcgt
     1081 aaagatttac aacgaccata cttcaataag cctccatctc aaccaacccc cactatggga
     1141 aaagtttctc gggagcctat ggttaagcct ttcgatggat atggagctgg agacaggaaa
     1201 tatgggtatc caatgccaca gcgggctgaa gagagccgga gagcaatgcc tcctacttca
     1261 tattataata aggatgttaa tacacctcaa aagccgctgc aacaaccacc gaggcagttc
     1321 cagtccaatg atactgcttc aaagagagcg gctcatttcc ccccgggctt gaattcctca
     1381 tcttctgcta ctgttttcac cattgcttca cttcagcaat acacaaataa tttctcagaa
     1441 gagaatataa tcggggaagg gtcgattggt aatgtctaca gagctgagct tcgtcatgga
     1501 aagtttcttg cggtgaagaa gctgagcaat accatcaaca gaacacagag tgacggcgaa
     1561 ttcctcaatc tagtctccaa tgtgttgaag cttaaacgcg gtcatatatt ggagcttctt
     1621 ggttactgta acgagtttgg tcaaaggtta cttgtgtatg agtactgtcc taatggatca
     1681 cttcaagatg cactacattt ggatcgcaag ttgcacaaga agctcacttg gaatgtacgt
     1741 ataaatattg cattaggagc ttcaaaggca ttgcagtttc ttcatgaggt atgtcaaccg
     1801 ccggttgttc accagaattt caagtcttcc aaggttcttc ttgatggaaa gctctcagta
     1861 cgtgttgcag acagcggttt ggcttatatg ttaccaccac gcccaacgag tcagatggcg
     1921 ggttatgccg ctcctgaggt tgagtatgga agctacactt gtcagagcga cgtatttagc
     1981 cttggggttg taatgttaga actgctcact ggacgcagac catttgacag gacaaggccg
     2041 aggggacatc aaacactagc tcagtgggcg attcctcggc ttcatgacat cgatgcgttg
     2101 acaagaatgg ttgatccgtc attacacgga gcgtatccaa tgaaatcatt gtcacgtttt
     2161 gcagatatca tatcacgttc actgcagatg gaaccaggat ttagaccgcc gatatcagaa
     2221 atagtccaag atcttcaaca tatgatctaa gatacacaac cttggactaa gacgcagaag
     2281 caatagttta ttgtcagatt cttgttcttt gtcctttgat gaatgaaagt atttcttttg
     2341 tattataata acactttatg tatgttgttg gctgtatgaa atgagctatg ggatcatcat
     2401 tatgtaaccc caatcccatt accggctcaa acattattca ccaacctgat catgtattta
     2461 gattctattt tctgaaaagg ataaacattt tttgaatcaa aagacattaa aattcaagaa
     2521 ca
//
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