U.S. flag

An official website of the United States government

PREDICTED: Mus musculus villin-like (Vill), transcript variant X3, mRNA

NCBI Reference Sequence: XM_006512061.2

FASTA Graphics 

LOCUS       XM_006512061            2722 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus villin-like (Vill), transcript variant X3,
            mRNA.
ACCESSION   XM_006512061
VERSION     XM_006512061.2
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000075.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jun 22, 2016 this sequence version replaced XM_006512061.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2722
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="9"
     gene            1..2722
                     /gene="Vill"
                     /gene_synonym="Villp"
                     /note="villin-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 mRNA, 16 ESTs, 13 long
                     SRA reads, 1 Protein, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 15 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:22351"
                     /db_xref="MGI:MGI:1201781"
     CDS             107..2638
                     /gene="Vill"
                     /gene_synonym="Villp"
                     /codon_start=1
                     /product="villin-like protein isoform X2"
                     /protein_id="XP_006512124.1"
                     /db_xref="GeneID:22351"
                     /db_xref="MGI:MGI:1201781"
                     /translation="MDINQDLPAIDSHRALQIWITENLKMLPLPERAHGNFFEECCYV
                     VLHVPQSPKATQGGFSDLHYWIGKDASAEAREAAVSFVQCLQEDLGDQTVLHRESQGH
                     ESDCFHSYFHPGVIYRKGGRDSALKFAETNMYNVQRLLHIRGRKHVSATEVALSWNSF
                     NKGDIFLLDLGKVMIQWNGPKASISEKARALTLTCNLRDRERGGRAQIAVVDAENEAT
                     NLLRIMEAVLGCRSGSLCPSVPSNSVSQLQKANVRLYHVCEKGTDLVVQELATRPLTQ
                     DLLQEDGCYLLDQGGFKIYMWQGRKSSPQEKKAALSRAVGFIQAKGYPNYTNVEVVND
                     GAESTAFQQLFWSWSKELDRKKHPEKSKLVQGNLEVGKLHTQPELAAQLRMVDDGSGK
                     VEVWYIQDLQRQPVHPKYYGQLCSGNCYLVLYTYQKLGCVQYLLYLWQGHQSTVEDTK
                     ALNCSAEELDLMHQGALAQGHVTMGSEPPHFLAIFQGRLVVFQGNAGNKGERPPVSDT
                     RLFHVQGTESHNTRTMEVPARASSLTSGDVFFLITSHVCYLWFGKGCHGDQREMARTV
                     VSVFPGNNKETVLEGQEPLYFWEALGGRAPYPSNKRLPEEVWSIQPRLFECSSHAGCL
                     VLTEVLFFGQEDLDKYDIMLLDTCQEASSVAQIFLWLGEAAGEWKKEAVAWGLEYLRT
                     HPAERSLATPIFVVKQGHEPATFTGWFVTWDPYKWMNSQSYEEMVGNSLGPGSAISEM
                     TAAFKGSQDSPENELGLDLRVDGANPSMNHTSSCSDSMVNGSLPRERLMHQALEDLPP
                     GVDPARKEFYLSDSDFQDIFGKSKEEFYSMAKWKQQQAKKKLGFF"
ORIGIN      
        1 cctgcaaggc gggagctggg attgagttac agttcggagg gaggggccta gtgttgccca
       61 caggctgagt gaaggaaggt gcagaggcag ttcccagaag cccgggatgg acatcaacca
      121 ggacctccca gccatcgaca gccacagagc cttgcaaata tggattactg agaacctaaa
      181 gatgctgcca ttgcctgaaa gggctcatgg gaatttcttt gaagaatgct gctatgtcgt
      241 ccttcatgtc cctcagagtc caaaagctac ccagggagga ttcagtgacc tgcactactg
      301 gattggaaag gatgccagcg cagaagcccg ggaggctgcg gtctcctttg tgcaatgtct
      361 gcaggaggac ctaggagacc agactgtgct gcaccgagag tcacagggcc acgagtccga
      421 ctgcttccac agctatttcc accctggagt catctacagg aagggaggca gagactctgc
      481 tctcaagttt gcggagacca acatgtacaa tgtccagcga ctgcttcaca tcaggggaag
      541 gaagcacgtg tctgccactg aggtggcctt gtcctggaac agctttaaca agggggacat
      601 cttcctgttg gacctgggca aggtgatgat ccagtggaat ggacccaaag ccagcatttc
      661 tgagaaagca cgggctctga ccctgacttg caacctcaga gacagggagc gaggtggccg
      721 tgcccaaatt gctgtggtag atgcggagaa tgaagccacc aaccttctgc gcatcatgga
      781 ggctgtgctg ggctgcagat caggcagcct gtgtccctct gtacccagca acagtgttag
      841 ccagctacaa aaggccaatg tccgcctcta ccatgtctgt gagaagggga cagacctggt
      901 ggtccaggaa ctggcgaccc gcccactgac ccaggacctc ctgcaagagg acggttgcta
      961 tctcctggac cagggtggct tcaagatcta catgtggcag ggacgaaagt ccagccccca
     1021 ggagaagaag gctgccctca gcagggctgt gggcttcatc caggccaagg gttacccgaa
     1081 ctacaccaat gtggaggtgg tgaacgacgg cgcggagtcc acagctttcc aacagctctt
     1141 ctggtcttgg tcgaaggagc tagataggaa aaaacaccca gagaagagta aactggtgca
     1201 gggaaacctg gaggtaggca agcttcacac ccagcctgag ctcgcggccc agctcagaat
     1261 ggtggacgac ggctctggga aggtggaggt gtggtacatc caggacttac aaagacagcc
     1321 tgtacatccc aagtactatg gccagttgtg ctcaggaaac tgctaccttg tcctctacac
     1381 ataccagaaa ctgggctgtg tccagtacct cctgtaccta tggcagggcc accaaagcac
     1441 tgtagaagac accaaggccc tgaactgcag tgctgaagag ttggacctca tgcaccaggg
     1501 tgcactggcg caggggcatg tgaccatggg cagtgagcct ccccacttcc tagccatctt
     1561 ccaggggcgg ctggtggtct tccaggggaa tgcaggcaac aaaggggaaa gaccaccagt
     1621 atccgacacc aggcttttcc acgtgcaagg gaccgagagc cacaacacca gaactatgga
     1681 ggtgccggcc cgtgcctcct ccctcacttc tggtgacgtc ttctttctga tcacaagtca
     1741 tgtttgctat ctctggtttg ggaagggctg tcatggggac caacgtgaga tggcgcggac
     1801 ggtggtcagt gtcttcccag ggaataacaa ggagacagtg ctggagggtc aggagcctct
     1861 ctacttctgg gaagccctcg gaggccgggc cccctatccc agtaacaaga ggcttcccga
     1921 ggaggtgtgg agcatccagc cccgactgtt cgagtgctcc agtcacgcag gctgcctggt
     1981 cctcacggaa gtgctgttct ttggccaaga ggacttggac aagtatgaca tcatgttact
     2041 agacacctgt caggaggcct cctctgtggc ccagatcttc ctgtggcttg gggaagctgc
     2101 aggtgaatgg aagaaagaag cagtggcctg gggccttgag tacctgagga ctcacccagc
     2161 agagaggagc ctggccacac ccatctttgt ggtcaagcaa ggccatgagc cagccacctt
     2221 taccgggtgg tttgtcacct gggaccctta caagtggatg aacagccagt cctacgagga
     2281 gatggtgggg aacagcctgg gaccgggatc tgcaatctct gagatgacag cagccttcaa
     2341 gggttcccag gacagtccag agaatgagct ggggctggac ctcagggtgg atggcgcaaa
     2401 ccccagcatg aaccacacca gcagctgcag tgactcaatg gtcaatggga gcctgccccg
     2461 ggaaaggctg atgcaccagg cactggagga cctgccaccg ggtgtggacc cagcccgtaa
     2521 ggagttctat ctctcagact ctgatttcca agacatcttc gggaaatcca aggaggagtt
     2581 ctacagcatg gccaagtgga agcagcagca agcgaaaaag aagctgggct tcttctgatg
     2641 tggggaaccc tgtgccacat accctgaaat tcctcctggg gtaactccca cttcctaata
     2701 aaagccagtg gctggcatcg gg
//
Feature
Display: FASTA GenBank Help
Details

Supplemental Content

Change region shown

Customize view

Reference sequence information

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
External link. Please review our privacy policy.