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NCBI Reference Sequence: XM_006512061.2
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LOCUS XM_006512061 2722 bp mRNA linear ROD 07-FEB-2024 DEFINITION PREDICTED: Mus musculus villin-like (Vill), transcript variant X3, mRNA. ACCESSION XM_006512061 VERSION XM_006512061.2 DBLINK BioProject: PRJNA169 KEYWORDS RefSeq. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000075.7) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 22, 2016 this sequence version replaced XM_006512061.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Updated annotation Annotation Name :: GCF_000001635.27-RS_2024_02 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.2 Annotation Method :: Best-placed RefSeq; Gnomon; RefSeqFE; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 02/01/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2722 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="taxon:10090" /chromosome="9" gene 1..2722 /gene="Vill" /gene_synonym="Villp" /note="villin-like; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 16 ESTs, 13 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns" /db_xref="GeneID:22351" /db_xref="MGI:MGI:1201781" CDS 107..2638 /gene="Vill" /gene_synonym="Villp" /codon_start=1 /product="villin-like protein isoform X2" /protein_id="XP_006512124.1" /db_xref="GeneID:22351" /db_xref="MGI:MGI:1201781" /translation="MDINQDLPAIDSHRALQIWITENLKMLPLPERAHGNFFEECCYV VLHVPQSPKATQGGFSDLHYWIGKDASAEAREAAVSFVQCLQEDLGDQTVLHRESQGH ESDCFHSYFHPGVIYRKGGRDSALKFAETNMYNVQRLLHIRGRKHVSATEVALSWNSF NKGDIFLLDLGKVMIQWNGPKASISEKARALTLTCNLRDRERGGRAQIAVVDAENEAT NLLRIMEAVLGCRSGSLCPSVPSNSVSQLQKANVRLYHVCEKGTDLVVQELATRPLTQ DLLQEDGCYLLDQGGFKIYMWQGRKSSPQEKKAALSRAVGFIQAKGYPNYTNVEVVND GAESTAFQQLFWSWSKELDRKKHPEKSKLVQGNLEVGKLHTQPELAAQLRMVDDGSGK VEVWYIQDLQRQPVHPKYYGQLCSGNCYLVLYTYQKLGCVQYLLYLWQGHQSTVEDTK ALNCSAEELDLMHQGALAQGHVTMGSEPPHFLAIFQGRLVVFQGNAGNKGERPPVSDT RLFHVQGTESHNTRTMEVPARASSLTSGDVFFLITSHVCYLWFGKGCHGDQREMARTV VSVFPGNNKETVLEGQEPLYFWEALGGRAPYPSNKRLPEEVWSIQPRLFECSSHAGCL VLTEVLFFGQEDLDKYDIMLLDTCQEASSVAQIFLWLGEAAGEWKKEAVAWGLEYLRT HPAERSLATPIFVVKQGHEPATFTGWFVTWDPYKWMNSQSYEEMVGNSLGPGSAISEM TAAFKGSQDSPENELGLDLRVDGANPSMNHTSSCSDSMVNGSLPRERLMHQALEDLPP GVDPARKEFYLSDSDFQDIFGKSKEEFYSMAKWKQQQAKKKLGFF" ORIGIN 1 cctgcaaggc gggagctggg attgagttac agttcggagg gaggggccta gtgttgccca 61 caggctgagt gaaggaaggt gcagaggcag ttcccagaag cccgggatgg acatcaacca 121 ggacctccca gccatcgaca gccacagagc cttgcaaata tggattactg agaacctaaa 181 gatgctgcca ttgcctgaaa gggctcatgg gaatttcttt gaagaatgct gctatgtcgt 241 ccttcatgtc cctcagagtc caaaagctac ccagggagga ttcagtgacc tgcactactg 301 gattggaaag gatgccagcg cagaagcccg ggaggctgcg gtctcctttg tgcaatgtct 361 gcaggaggac ctaggagacc agactgtgct gcaccgagag tcacagggcc acgagtccga 421 ctgcttccac agctatttcc accctggagt catctacagg aagggaggca gagactctgc 481 tctcaagttt gcggagacca acatgtacaa tgtccagcga ctgcttcaca tcaggggaag 541 gaagcacgtg tctgccactg aggtggcctt gtcctggaac agctttaaca agggggacat 601 cttcctgttg gacctgggca aggtgatgat ccagtggaat ggacccaaag ccagcatttc 661 tgagaaagca cgggctctga ccctgacttg caacctcaga gacagggagc gaggtggccg 721 tgcccaaatt gctgtggtag atgcggagaa tgaagccacc aaccttctgc gcatcatgga 781 ggctgtgctg ggctgcagat caggcagcct gtgtccctct gtacccagca acagtgttag 841 ccagctacaa aaggccaatg tccgcctcta ccatgtctgt gagaagggga cagacctggt 901 ggtccaggaa ctggcgaccc gcccactgac ccaggacctc ctgcaagagg acggttgcta 961 tctcctggac cagggtggct tcaagatcta catgtggcag ggacgaaagt ccagccccca 1021 ggagaagaag gctgccctca gcagggctgt gggcttcatc caggccaagg gttacccgaa 1081 ctacaccaat gtggaggtgg tgaacgacgg cgcggagtcc acagctttcc aacagctctt 1141 ctggtcttgg tcgaaggagc tagataggaa aaaacaccca gagaagagta aactggtgca 1201 gggaaacctg gaggtaggca agcttcacac ccagcctgag ctcgcggccc agctcagaat 1261 ggtggacgac ggctctggga aggtggaggt gtggtacatc caggacttac aaagacagcc 1321 tgtacatccc aagtactatg gccagttgtg ctcaggaaac tgctaccttg tcctctacac 1381 ataccagaaa ctgggctgtg tccagtacct cctgtaccta tggcagggcc accaaagcac 1441 tgtagaagac accaaggccc tgaactgcag tgctgaagag ttggacctca tgcaccaggg 1501 tgcactggcg caggggcatg tgaccatggg cagtgagcct ccccacttcc tagccatctt 1561 ccaggggcgg ctggtggtct tccaggggaa tgcaggcaac aaaggggaaa gaccaccagt 1621 atccgacacc aggcttttcc acgtgcaagg gaccgagagc cacaacacca gaactatgga 1681 ggtgccggcc cgtgcctcct ccctcacttc tggtgacgtc ttctttctga tcacaagtca 1741 tgtttgctat ctctggtttg ggaagggctg tcatggggac caacgtgaga tggcgcggac 1801 ggtggtcagt gtcttcccag ggaataacaa ggagacagtg ctggagggtc aggagcctct 1861 ctacttctgg gaagccctcg gaggccgggc cccctatccc agtaacaaga ggcttcccga 1921 ggaggtgtgg agcatccagc cccgactgtt cgagtgctcc agtcacgcag gctgcctggt 1981 cctcacggaa gtgctgttct ttggccaaga ggacttggac aagtatgaca tcatgttact 2041 agacacctgt caggaggcct cctctgtggc ccagatcttc ctgtggcttg gggaagctgc 2101 aggtgaatgg aagaaagaag cagtggcctg gggccttgag tacctgagga ctcacccagc 2161 agagaggagc ctggccacac ccatctttgt ggtcaagcaa ggccatgagc cagccacctt 2221 taccgggtgg tttgtcacct gggaccctta caagtggatg aacagccagt cctacgagga 2281 gatggtgggg aacagcctgg gaccgggatc tgcaatctct gagatgacag cagccttcaa 2341 gggttcccag gacagtccag agaatgagct ggggctggac ctcagggtgg atggcgcaaa 2401 ccccagcatg aaccacacca gcagctgcag tgactcaatg gtcaatggga gcctgccccg 2461 ggaaaggctg atgcaccagg cactggagga cctgccaccg ggtgtggacc cagcccgtaa 2521 ggagttctat ctctcagact ctgatttcca agacatcttc gggaaatcca aggaggagtt 2581 ctacagcatg gccaagtgga agcagcagca agcgaaaaag aagctgggct tcttctgatg 2641 tggggaaccc tgtgccacat accctgaaat tcctcctggg gtaactccca cttcctaata 2701 aaagccagtg gctggcatcg gg //
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