[dbsnp-announce] dbSNP Build 144: Human, horse, chicken, and soybean
Public announcements regarding dbSNP
dbsnp-announce at ncbi.nlm.nih.gov
Mon Jun 8 13:39:48 EDT 2015
The following organisms are available in dbSNP Build 144.
organism: Homo sapiens
tax_id: 9606
common_name: human
assembly: GRCh38.p2 (GCF_000001405.28)
total_ss_cnt: 505875709
total_rs_cnt: 149735377
new_ss_cnt: 140933587
new_rs_cnt: 36991638
FTP: ftp://ftp.ncbi.nih.gov/snp/organisms/human_9606 (Additional release notes below)
Entrez: http://www.ncbi.nlm.nih.gov/snp/?term=txid9606
Human FTP release notes:
- Build 144 maps to both GRCh38p2 and GRCh37p13. The FTP directory structure for each assembly is available at: ftp://ftp.ncbi.nih.gov/snp/release-notes/Build144/human_ftp_directory_change.txt
- Remap issues between GRCh37p13 and GRCh38p2 (ftp://ftp.ncbi.nih.gov/snp/release-notes/Build144/human_9606_b144_release_notes.txt)
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organism: Gallus gallus
tax_id: 9031
common_name: chicken
assembly: Gallus_gallus-4.0 (GCF_000002315.3)
total_ss_cnt: 57685403
total_rs_cnt: 20443749
new_ss_cnt: 25550019
new_rs_cnt: 10917681
FTP: ftp://ftp.ncbi.nih.gov/snp/organisms/chicken_9031
Entrez: http://www.ncbi.nlm.nih.gov/snp/?term=txid9031
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organism: Glycine max
tax_id: 3847
common_name: soybean
assembly: V1.1 (GCF_000004515.3)
total_ss_cnt: 32069807
total_rs_cnt: 16592383
new_ss_cnt: 10481221
new_rs_cnt: 3505321
FTP: ftp://ftp.ncbi.nih.gov/snp/organisms/soybean_3847
Entrez: http://www.ncbi.nlm.nih.gov/snp/?term=txid3847
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organism: Equus caballus
tax_id: 9796
common_name: horse
assembly: EquCab2.0 (GCF_000002305.2)
total_ss_cnt: 5572537
total_rs_cnt: 5069494
new_ss_cnt: 119519
new_rs_cnt: 95440
FTP: ftp://ftp.ncbi.nih.gov/snp/organisms/horse_9796
Entrez: http://www.ncbi.nlm.nih.gov/snp/?term=txid9796
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Contact snp-admin at ncbi.nlm.ncbi.nih.gov if you have any questions or concerns.
dbSNP Production Team
National Center for Biotechnology Information (NCBI)
National Library of Medicine
National Institutes of Health
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