[dbsnp-announce] dbSNP Build 144: Human, horse, chicken, and soybean

Public announcements regarding dbSNP dbsnp-announce at ncbi.nlm.nih.gov
Mon Jun 8 13:39:48 EDT 2015


The following organisms are available in dbSNP Build 144.

organism:     Homo sapiens
tax_id:       9606
common_name:  human
assembly:     GRCh38.p2 (GCF_000001405.28)
total_ss_cnt: 505875709
total_rs_cnt: 149735377
new_ss_cnt:   140933587
new_rs_cnt:   36991638
FTP:          ftp://ftp.ncbi.nih.gov/snp/organisms/human_9606  (Additional release notes below)
Entrez:       http://www.ncbi.nlm.nih.gov/snp/?term=txid9606

Human FTP release notes:
-              Build 144 maps to both GRCh38p2 and GRCh37p13.   The FTP directory structure for each assembly is available at: ftp://ftp.ncbi.nih.gov/snp/release-notes/Build144/human_ftp_directory_change.txt
-              Remap issues between GRCh37p13 and GRCh38p2 (ftp://ftp.ncbi.nih.gov/snp/release-notes/Build144/human_9606_b144_release_notes.txt)
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organism:     Gallus gallus
tax_id:       9031
common_name:  chicken
assembly:     Gallus_gallus-4.0 (GCF_000002315.3)
total_ss_cnt: 57685403
total_rs_cnt: 20443749
new_ss_cnt:   25550019
new_rs_cnt:   10917681
FTP:          ftp://ftp.ncbi.nih.gov/snp/organisms/chicken_9031
Entrez:       http://www.ncbi.nlm.nih.gov/snp/?term=txid9031
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organism:     Glycine max
tax_id:       3847
common_name:  soybean
assembly:     V1.1 (GCF_000004515.3)
total_ss_cnt: 32069807
total_rs_cnt: 16592383
new_ss_cnt:   10481221
new_rs_cnt:   3505321
FTP:          ftp://ftp.ncbi.nih.gov/snp/organisms/soybean_3847
Entrez:       http://www.ncbi.nlm.nih.gov/snp/?term=txid3847
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organism:     Equus caballus
tax_id:       9796
common_name:  horse
assembly:     EquCab2.0 (GCF_000002305.2)
total_ss_cnt: 5572537
total_rs_cnt: 5069494
new_ss_cnt:   119519
new_rs_cnt:   95440
FTP:          ftp://ftp.ncbi.nih.gov/snp/organisms/horse_9796
Entrez:       http://www.ncbi.nlm.nih.gov/snp/?term=txid9796

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Contact snp-admin at ncbi.nlm.ncbi.nih.gov if you have any questions or concerns.

dbSNP Production Team
National Center for Biotechnology Information (NCBI)
National Library of Medicine
National Institutes of Health


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