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Links from GEO Profiles

Items: 20

1.
Value/Rank Plot

c0651 - Stress factor RpoS regulon in exponential-phase bacteria

Annotation:
c0651, hypothetical protein (multiple annotations exist)
Organism:
Escherichia coli K-12
Reporter:
GPL199, ybcY_b0562_at (ID_REF), GDS3123, 1035198 (Gene ID), 1039676 (Gene ID), 913222 (Gene ID), 945170 (Gene ID), 959875 (Gene ID), b0562 (ORF)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
49312391

GEO DataSets Gene Profile neighbors Chromosome neighbors

2.
Value/Rank Plot

c0651 - Stress factor RpoS regulon in exponential-phase bacteria

Annotation:
c0651, hypothetical protein (multiple annotations exist)
Organism:
Escherichia coli K-12
Reporter:
GPL199, IG_381_581807_583902_rev_at (ID_REF), GDS3123, 1035198 (Gene ID), 1039676 (Gene ID), 945170 (Gene ID), 959875 (Gene ID), /start=581807 /end=583902 /direction=+ /description=intergenic region (SPOT ID)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
49310291

GEO DataSets Gene Profile neighbors Chromosome neighbors

3.
Value/Rank Plot

ylcE - Stress factor RpoS regulon in exponential-phase bacteria

Annotation:
ylcE, hypothetical protein (multiple annotations exist)
Organism:
Escherichia coli K-12
Reporter:
GPL199, ylcE_b0563_at (ID_REF), GDS3123, 1035199 (Gene ID), 913219 (Gene ID), 945183 (Gene ID), 959876 (Gene ID), b0563 (ORF)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
49313632

GEO DataSets Gene Profile neighbors Chromosome neighbors

4.
Value/Rank Plot

tfaD - Stress factor RpoS regulon in exponential-phase bacteria

Annotation:
tfaD, pseudo
Organism:
Escherichia coli K-12
Reporter:
GPL199, ybcX_b0561_at (ID_REF), GDS3123, 945171 (Gene ID), b0561 (ORF)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
49312390

GEO DataSets Gene Profile neighbors Chromosome neighbors

5.
Value/Rank Plot

nohQ - Stress factor RpoS regulon in exponential-phase bacteria

Annotation:
nohQ, pseudo (multiple annotations exist)
Organism:
Escherichia coli K-12
Reporter:
GPL199, nohA_b1548_s_at (ID_REF), GDS3123, 945172 (Gene ID), 946021 (Gene ID), b1548 (ORF)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
49311355

GEO DataSets Gene Profile neighbors Chromosome neighbors

6.
Value/Rank Plot

appY - Stress factor RpoS regulon in exponential-phase bacteria

Annotation:
appY, global transcriptional activator; DLP12 prophage
Organism:
Escherichia coli K-12
Reporter:
GPL199, appY_b0564_at (ID_REF), GDS3123, 948797 (Gene ID), b0564 (ORF)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
49306607

GEO DataSets Gene Profile neighbors Chromosome neighbors

7.
Value/Rank Plot

Z1880 - Stress factor RpoS regulon in exponential-phase bacteria

Annotation:
Z1880, hypothetical protein (multiple annotations exist)
Organism:
Escherichia coli K-12
Reporter:
GPL199, ybcW_b0559_at (ID_REF), GDS3123, 913255 (Gene ID), 945175 (Gene ID), 959836 (Gene ID), b0559 (ORF)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
49312389

GEO DataSets Gene Profile neighbors Chromosome neighbors

8.
Value/Rank Plot

ompT - Stress factor RpoS regulon in exponential-phase bacteria

Annotation:
ompT, DLP12 prophage; outer membrane protease VII; outer membrane protein 3b
Organism:
Escherichia coli K-12
Reporter:
GPL199, ompT_b0565_at (ID_REF), GDS3123, 945185 (Gene ID), b0565 (ORF)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
49311398

GEO DataSets Gene Profile neighbors Chromosome neighbors

9.
Value/Rank Plot

Z1879 - Stress factor RpoS regulon in exponential-phase bacteria

Annotation:
Z1879, envelope protein of prophage CP-933X (multiple annotations exist)
Organism:
Escherichia coli K-12
Reporter:
GPL199, ybcV_b0558_at (ID_REF), GDS3123, 913256 (Gene ID), 945178 (Gene ID), 959835 (Gene ID), b0558 (ORF)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
49312388

GEO DataSets Gene Profile neighbors Chromosome neighbors

10.
Value/Rank Plot

Z1878 - Stress factor RpoS regulon in exponential-phase bacteria

Annotation:
Z1878, Bor protein of prophage CP-933X (multiple annotations exist)
Organism:
Escherichia coli K-12
Reporter:
GPL199, ybcU_b0557_at (ID_REF), GDS3123, 913257 (Gene ID), 913557 (Gene ID), 948980 (Gene ID), 959114 (Gene ID), 959834 (Gene ID), b0557 (ORF)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
49312387

GEO DataSets Gene Profile neighbors Chromosome neighbors

11.
Value/Rank Plot

envY - Stress factor RpoS regulon in exponential-phase bacteria

Annotation:
envY, envelope protein; thermoregulation of porin biosynthesis (multiple annotations exist)
Organism:
Escherichia coli K-12
Reporter:
GPL199, envY_b0566_at (ID_REF), GDS3123, 916956 (Gene ID), 949114 (Gene ID), 957551 (Gene ID), b0566 (ORF)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
49307603

GEO DataSets Gene Profile neighbors Chromosome neighbors

12.
Value/Rank Plot

c1563 - Stress factor RpoS regulon in exponential-phase bacteria

Annotation:
c1563, Rz endopeptidase from lambdoid prophage DLP12 (multiple annotations exist)
Organism:
Escherichia coli K-12
Reporter:
GPL199, ybcT_b0556_f_at (ID_REF), GDS3123, 1035314 (Gene ID), 913261 (Gene ID), 945929 (Gene ID), 959833 (Gene ID), b0556 (ORF)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
49312386

GEO DataSets Gene Profile neighbors Chromosome neighbors

13.
Value/Rank Plot

rrrD - Stress factor RpoS regulon in exponential-phase bacteria

Annotation:
rrrD, DLP12 prophage; putative lysozyme
Organism:
Escherichia coli K-12
Reporter:
GPL199, ybcS_b0555_at (ID_REF), GDS3123, 947539 (Gene ID), b0555 (ORF)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
49312385

GEO DataSets Gene Profile neighbors Chromosome neighbors

14.
Value/Rank Plot

essD - Stress factor RpoS regulon in exponential-phase bacteria

Annotation:
essD, DLP12 prophage; putative phage lysis protein
Organism:
Escherichia coli K-12
Reporter:
GPL199, ybcR_b0554_at (ID_REF), GDS3123, 947545 (Gene ID), b0554 (ORF)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
49312384

GEO DataSets Gene Profile neighbors Chromosome neighbors

15.
Value/Rank Plot

ybcH - Stress factor RpoS regulon in exponential-phase bacteria

Annotation:
ybcH, hypothetical protein (multiple annotations exist)
Organism:
Escherichia coli K-12
Reporter:
GPL199, ybcH_b0567_at (ID_REF), GDS3123, 916957 (Gene ID), 945186 (Gene ID), 957552 (Gene ID), b0567 (ORF)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
49312375

GEO DataSets Gene Profile neighbors Chromosome neighbors

16.
Value/Rank Plot

nfrA - Stress factor RpoS regulon in exponential-phase bacteria

Annotation:
nfrA, bacteriophage N4 receptor, outer membrane subunit (multiple annotations exist)
Organism:
Escherichia coli K-12
Reporter:
GPL199, nfrA_b0568_at (ID_REF), GDS3123, 916958 (Gene ID), 944741 (Gene ID), 957554 (Gene ID), b0568 (ORF)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
49311335

GEO DataSets Gene Profile neighbors Chromosome neighbors

17.
Value/Rank Plot

quuD - Stress factor RpoS regulon in exponential-phase bacteria

Annotation:
quuD, DLP12 prophage; putative antitermination protein
Organism:
Escherichia coli K-12
Reporter:
GPL199, ybcQ_b0551_at (ID_REF), GDS3123, 945177 (Gene ID), b0551 (ORF)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
49312383

GEO DataSets Gene Profile neighbors Chromosome neighbors

18.
Value/Rank Plot

rus - Stress factor RpoS regulon in exponential-phase bacteria

Annotation:
rus, endodeoxyribonuclease RUS (multiple annotations exist)
Organism:
Escherichia coli K-12
Reporter:
GPL199, rus_b0550_at (ID_REF), GDS3123, 1035306 (Gene ID), 945174 (Gene ID), b0550 (ORF)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
49311829

GEO DataSets Gene Profile neighbors Chromosome neighbors

19.
Value/Rank Plot

nfrB - Stress factor RpoS regulon in exponential-phase bacteria

Annotation:
nfrB, bacteriophage N4 adsorption protein B (multiple annotations exist)
Organism:
Escherichia coli K-12
Reporter:
GPL199, nfrB_b0569_at (ID_REF), GDS3123, 1035290 (Gene ID), 916959 (Gene ID), 945849 (Gene ID), 957558 (Gene ID), b0569 (ORF)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
49311336

GEO DataSets Gene Profile neighbors Chromosome neighbors

20.
Value/Rank Plot

cusS - Stress factor RpoS regulon in exponential-phase bacteria

Annotation:
cusS, copper-sensing histidine kinase in two-component regulatory system with CusR
Organism:
Escherichia coli K-12
Reporter:
GPL199, ybcZ_b0570_at (ID_REF), GDS3123, 945978 (Gene ID), b0570 (ORF)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
49312392

GEO DataSets Gene Profile neighbors Chromosome neighbors

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