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Links from GEO Profiles

Items: 20

1.
Value/Rank Plot

Z1878 - RyhB small regulatory RNA effect on global iron use

Annotation:
Z1878, Bor protein of prophage CP-933X (multiple annotations exist)
Organism:
Escherichia coli, Escherichia coli K-12
Reporter:
GPL199, ybcU_b0557_at (ID_REF), GDS1494, 913257 (Gene ID), 913557 (Gene ID), 948980 (Gene ID), 959114 (Gene ID), 959834 (Gene ID), b0557 (ORF)
DataSet type:
Expression profiling by array, count, 12 samples
ID:
14987187

GEO DataSets Gene Profile neighbors Chromosome neighbors

2.
Value/Rank Plot

c1563 - RyhB small regulatory RNA effect on global iron use

Annotation:
c1563, Rz endopeptidase from lambdoid prophage DLP12 (multiple annotations exist)
Organism:
Escherichia coli, Escherichia coli K-12
Reporter:
GPL199, ybcT_b0556_f_at (ID_REF), GDS1494, 1035314 (Gene ID), 913261 (Gene ID), 945929 (Gene ID), 959833 (Gene ID), b0556 (ORF)
DataSet type:
Expression profiling by array, count, 12 samples
ID:
14987186

GEO DataSets Gene Profile neighbors Chromosome neighbors

3.
Value/Rank Plot

Z1879 - RyhB small regulatory RNA effect on global iron use

Annotation:
Z1879, envelope protein of prophage CP-933X (multiple annotations exist)
Organism:
Escherichia coli, Escherichia coli K-12
Reporter:
GPL199, ybcV_b0558_at (ID_REF), GDS1494, 913256 (Gene ID), 945178 (Gene ID), 959835 (Gene ID), b0558 (ORF)
DataSet type:
Expression profiling by array, count, 12 samples
ID:
14987188

GEO DataSets Gene Profile neighbors Chromosome neighbors

4.
Value/Rank Plot

rrrD - RyhB small regulatory RNA effect on global iron use

Annotation:
rrrD, DLP12 prophage; putative lysozyme
Organism:
Escherichia coli, Escherichia coli K-12
Reporter:
GPL199, ybcS_b0555_at (ID_REF), GDS1494, 947539 (Gene ID), b0555 (ORF)
DataSet type:
Expression profiling by array, count, 12 samples
ID:
14987185

GEO DataSets Gene Profile neighbors Chromosome neighbors

5.
Value/Rank Plot

Z1880 - RyhB small regulatory RNA effect on global iron use

Annotation:
Z1880, hypothetical protein (multiple annotations exist)
Organism:
Escherichia coli, Escherichia coli K-12
Reporter:
GPL199, ybcW_b0559_at (ID_REF), GDS1494, 913255 (Gene ID), 945175 (Gene ID), 959836 (Gene ID), b0559 (ORF)
DataSet type:
Expression profiling by array, count, 12 samples
ID:
14987189

GEO DataSets Gene Profile neighbors Chromosome neighbors

6.
Value/Rank Plot

essD - RyhB small regulatory RNA effect on global iron use

Annotation:
essD, DLP12 prophage; putative phage lysis protein
Organism:
Escherichia coli, Escherichia coli K-12
Reporter:
GPL199, ybcR_b0554_at (ID_REF), GDS1494, 947545 (Gene ID), b0554 (ORF)
DataSet type:
Expression profiling by array, count, 12 samples
ID:
14987184

GEO DataSets Gene Profile neighbors Chromosome neighbors

7.
Value/Rank Plot

nohQ - RyhB small regulatory RNA effect on global iron use

Annotation:
nohQ, pseudo (multiple annotations exist)
Organism:
Escherichia coli, Escherichia coli K-12
Reporter:
GPL199, nohA_b1548_s_at (ID_REF), GDS1494, 945172 (Gene ID), 946021 (Gene ID), b1548 (ORF)
DataSet type:
Expression profiling by array, count, 12 samples
ID:
14986155

GEO DataSets Gene Profile neighbors Chromosome neighbors

8.
Value/Rank Plot

tfaD - RyhB small regulatory RNA effect on global iron use

Annotation:
tfaD, pseudo
Organism:
Escherichia coli, Escherichia coli K-12
Reporter:
GPL199, ybcX_b0561_at (ID_REF), GDS1494, 945171 (Gene ID), b0561 (ORF)
DataSet type:
Expression profiling by array, count, 12 samples
ID:
14987190

GEO DataSets Gene Profile neighbors Chromosome neighbors

9.
Value/Rank Plot

c0651 - RyhB small regulatory RNA effect on global iron use

Annotation:
c0651, hypothetical protein (multiple annotations exist)
Organism:
Escherichia coli, Escherichia coli K-12
Reporter:
GPL199, ybcY_b0562_at (ID_REF), GDS1494, 1035198 (Gene ID), 1039676 (Gene ID), 913222 (Gene ID), 945170 (Gene ID), 959875 (Gene ID), b0562 (ORF)
DataSet type:
Expression profiling by array, count, 12 samples
ID:
14987191

GEO DataSets Gene Profile neighbors Chromosome neighbors

10.
Value/Rank Plot

c0651 - RyhB small regulatory RNA effect on global iron use

Annotation:
c0651, hypothetical protein (multiple annotations exist)
Organism:
Escherichia coli, Escherichia coli K-12
Reporter:
GPL199, IG_381_581807_583902_rev_at (ID_REF), GDS1494, 1035198 (Gene ID), 1039676 (Gene ID), 945170 (Gene ID), 959875 (Gene ID), /start=581807 /end=583902 /direction=+ /description=intergenic region (SPOT ID)
DataSet type:
Expression profiling by array, count, 12 samples
ID:
14985091

GEO DataSets Gene Profile neighbors Chromosome neighbors

11.
Value/Rank Plot

ylcE - RyhB small regulatory RNA effect on global iron use

Annotation:
ylcE, hypothetical protein (multiple annotations exist)
Organism:
Escherichia coli, Escherichia coli K-12
Reporter:
GPL199, ylcE_b0563_at (ID_REF), GDS1494, 1035199 (Gene ID), 913219 (Gene ID), 945183 (Gene ID), 959876 (Gene ID), b0563 (ORF)
DataSet type:
Expression profiling by array, count, 12 samples
ID:
14988432

GEO DataSets Gene Profile neighbors Chromosome neighbors

12.
Value/Rank Plot

quuD - RyhB small regulatory RNA effect on global iron use

Annotation:
quuD, DLP12 prophage; putative antitermination protein
Organism:
Escherichia coli, Escherichia coli K-12
Reporter:
GPL199, ybcQ_b0551_at (ID_REF), GDS1494, 945177 (Gene ID), b0551 (ORF)
DataSet type:
Expression profiling by array, count, 12 samples
ID:
14987183

GEO DataSets Gene Profile neighbors Chromosome neighbors

13.
Value/Rank Plot

rus - RyhB small regulatory RNA effect on global iron use

Annotation:
rus, endodeoxyribonuclease RUS (multiple annotations exist)
Organism:
Escherichia coli, Escherichia coli K-12
Reporter:
GPL199, rus_b0550_at (ID_REF), GDS1494, 1035306 (Gene ID), 945174 (Gene ID), b0550 (ORF)
DataSet type:
Expression profiling by array, count, 12 samples
ID:
14986629

GEO DataSets Gene Profile neighbors Chromosome neighbors

14.
Value/Rank Plot

appY - RyhB small regulatory RNA effect on global iron use

Annotation:
appY, global transcriptional activator; DLP12 prophage
Organism:
Escherichia coli, Escherichia coli K-12
Reporter:
GPL199, appY_b0564_at (ID_REF), GDS1494, 948797 (Gene ID), b0564 (ORF)
DataSet type:
Expression profiling by array, count, 12 samples
ID:
14981407

GEO DataSets Gene Profile neighbors Chromosome neighbors

15.
Value/Rank Plot

ybcO - RyhB small regulatory RNA effect on global iron use

Annotation:
ybcO, DLP12 prophage; uncharacterized protein
Organism:
Escherichia coli, Escherichia coli K-12
Reporter:
GPL199, ybcO_b0549_at (ID_REF), GDS1494, 945147 (Gene ID), b0549 (ORF)
DataSet type:
Expression profiling by array, count, 12 samples
ID:
14987182

GEO DataSets Gene Profile neighbors Chromosome neighbors

16.
Value/Rank Plot

ninE - RyhB small regulatory RNA effect on global iron use

Annotation:
ninE, DLP12 prophage; conserved protein
Organism:
Escherichia coli, Escherichia coli K-12
Reporter:
GPL199, ninE_b0548_at (ID_REF), GDS1494, 945151 (Gene ID), b0548 (ORF)
DataSet type:
Expression profiling by array, count, 12 samples
ID:
14986145

GEO DataSets Gene Profile neighbors Chromosome neighbors

17.
Value/Rank Plot

ybcN - RyhB small regulatory RNA effect on global iron use

Annotation:
ybcN, DLP12 prophage; uncharacterized protein
Organism:
Escherichia coli, Escherichia coli K-12
Reporter:
GPL199, ybcN_b0547_at (ID_REF), GDS1494, 945162 (Gene ID), b0547 (ORF)
DataSet type:
Expression profiling by array, count, 12 samples
ID:
14987181

GEO DataSets Gene Profile neighbors Chromosome neighbors

18.
Value/Rank Plot

ompT - RyhB small regulatory RNA effect on global iron use

Annotation:
ompT, DLP12 prophage; outer membrane protease VII; outer membrane protein 3b
Organism:
Escherichia coli, Escherichia coli K-12
Reporter:
GPL199, ompT_b0565_at (ID_REF), GDS1494, 945185 (Gene ID), b0565 (ORF)
DataSet type:
Expression profiling by array, count, 12 samples
ID:
14986198

GEO DataSets Gene Profile neighbors Chromosome neighbors

19.
Value/Rank Plot

ybcM - RyhB small regulatory RNA effect on global iron use

Annotation:
ybcM, DLP12 prophage; putative DNA-binding transcriptional regulator
Organism:
Escherichia coli, Escherichia coli K-12
Reporter:
GPL199, ybcM_b0546_at (ID_REF), GDS1494, 945163 (Gene ID), b0546 (ORF)
DataSet type:
Expression profiling by array, count, 12 samples
ID:
14987180

GEO DataSets Gene Profile neighbors Chromosome neighbors

20.
Value/Rank Plot

ybcL - RyhB small regulatory RNA effect on global iron use

Annotation:
ybcL, inactive polymorphonuclear leukocyte migration suppressor; DLP12 prophage; UPF0098 family secreted protein
Organism:
Escherichia coli, Escherichia coli K-12
Reporter:
GPL199, ybcL_b0545_at (ID_REF), GDS1494, 945165 (Gene ID), b0545 (ORF)
DataSet type:
Expression profiling by array, count, 12 samples
ID:
14987179

GEO DataSets Gene Profile neighbors Chromosome neighbors

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