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Links from GEO Profiles

Items: 18

1.
Value/Rank Plot

H1FX-AS1 - Oncogenic BRAF harboring melanoma cell line response to BRAF inhibition

Annotation:
H1FX-AS1, H1FX antisense RNA 1
Organism:
Homo sapiens
Reporter:
GPL6244, 8082517 (ID_REF), GDS5085, NR_026991, AK091470, chr3:129037037-129042342 (SPOT ID)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
112046413

GEO DataSets Gene Profile neighbors Chromosome neighbors

2.
Value/Rank Plot

H1FX - Oncogenic BRAF harboring melanoma cell line response to BRAF inhibition

Annotation:
H1FX, H1 histone family member X
Organism:
Homo sapiens
Reporter:
GPL6244, 8090555 (ID_REF), GDS5085, NM_006026, BC000426, BC010435, D64142, chr3:129033614-129035120 (SPOT ID)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
112047173

GEO DataSets Gene Profile neighbors Chromosome neighbors Homologene neighbors

3.
Value/Rank Plot

HMCES - Oncogenic BRAF harboring melanoma cell line response to BRAF inhibition

Annotation:
HMCES, 5-hydroxymethylcytosine (hmC) binding, ES cell-specific
Organism:
Homo sapiens
Reporter:
GPL6244, 8082504 (ID_REF), GDS5085, NM_001006109, NM_020187, AF201934, AK297501, AK309891, BC009993, BC010125, BC050686, BC088363, chr3:128997684-129024146 (SPOT ID)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
112046412

GEO DataSets Gene Profile neighbors Chromosome neighbors Homologene neighbors

4.
Value/Rank Plot

COPG1 - Oncogenic BRAF harboring melanoma cell line response to BRAF inhibition

Annotation:
COPG1, coatomer protein complex subunit gamma 1
Organism:
Homo sapiens
Reporter:
GPL6244, 8082478 (ID_REF), GDS5085, NM_016128, AB047846, AF100756, BC066650, chr3:128968453-128996616 (SPOT ID)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
112046411

GEO DataSets Gene Profile neighbors Chromosome neighbors Homologene neighbors

5.
Value/Rank Plot

RPL32P3 - Oncogenic BRAF harboring melanoma cell line response to BRAF inhibition

Annotation:
RPL32P3, ribosomal protein L32 pseudogene 3
Organism:
Homo sapiens
Reporter:
GPL6244, 8090559 (ID_REF), GDS5085, NR_003111, BC053996, chr3:129101765-129118248 (SPOT ID)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
112047174

GEO DataSets Gene Profile neighbors Chromosome neighbors

6.
Value/Rank Plot

SNORA7B - Oncogenic BRAF harboring melanoma cell line response to BRAF inhibition

Annotation:
SNORA7B, small nucleolar RNA, H/ACA box 7B
Organism:
Homo sapiens
Reporter:
GPL6244, 8090565 (ID_REF), GDS5085, NR_002992, chr3:129116053-129116191 (SPOT ID)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
112047175

GEO DataSets Gene Profile neighbors Chromosome neighbors

7.
Value/Rank Plot

EFCAB12 - Oncogenic BRAF harboring melanoma cell line response to BRAF inhibition

Annotation:
EFCAB12, EF-hand calcium binding domain 12
Organism:
Homo sapiens
Reporter:
GPL6244, 8090567 (ID_REF), GDS5085, NM_207307, AL133011, BC066975, AK096099, chr3:129120164-129147494 (SPOT ID)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
112047176

GEO DataSets Gene Profile neighbors Chromosome neighbors Homologene neighbors

8.
Value/Rank Plot

MBD4 - Oncogenic BRAF harboring melanoma cell line response to BRAF inhibition

Annotation:
MBD4, methyl-CpG binding domain 4, DNA glycosylase
Organism:
Homo sapiens
Reporter:
GPL6244, 8090577 (ID_REF), GDS5085, NM_001276270, NM_001276271, NM_001276272, NM_001276273, NM_003925, AF072250, AF114784, AF532602, BC011752, CR450305, chr3:129149793-129158852 (SPOT ID)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
112047177

GEO DataSets Gene Profile neighbors Chromosome neighbors Homologene neighbors

9.
Value/Rank Plot

CNBP - Oncogenic BRAF harboring melanoma cell line response to BRAF inhibition

Annotation:
CNBP, CCHC-type zinc finger nucleic acid binding protein
Organism:
Homo sapiens
Reporter:
GPL6244, 8090546 (ID_REF), GDS5085, NM_001127192, NM_001127193, NM_001127194, NM_001127195, NM_001127196, NM_003418, AK292119, BC000288, BC014911, BC093058, BT019613, DQ091187, DQ092366, DQ092367, M28372, chr3:128888327-128902787 (SPOT ID)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
112047172

GEO DataSets Gene Profile neighbors Chromosome neighbors Homologene neighbors

10.
Value/Rank Plot

IFT122 - Oncogenic BRAF harboring melanoma cell line response to BRAF inhibition

Annotation:
IFT122, intraflagellar transport 122
Organism:
Homo sapiens
Reporter:
GPL6244, 8082523 (ID_REF), GDS5085, NM_001280541, NM_001280545, NM_001280546, NM_018262, NM_052985, NM_052989, NM_052990, XM_006713695, AF244930, AF244931, AF302154, AK024435, BC003045, BC004238, BC028353, AK057162, chr3:129158968-129239198 (SPOT ID)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
112046414

GEO DataSets Gene Profile neighbors Chromosome neighbors Homologene neighbors

11.
Value/Rank Plot

ISY1-RAB43 - Oncogenic BRAF harboring melanoma cell line response to BRAF inhibition

Annotation:
ISY1-RAB43, ISY1-RAB43 readthrough (multiple annotations exist)
Organism:
Homo sapiens
Reporter:
GPL6244, 8090533 (ID_REF), GDS5085, NM_001199469, NM_020701, BC004442, BC007409, BC019849, NM_001204890, BC018848, chr3:128848217-128880029 (SPOT ID)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
112047171

GEO DataSets Gene Profile neighbors Chromosome neighbors

12.
Value/Rank Plot

ISY1-RAB43 - Oncogenic BRAF harboring melanoma cell line response to BRAF inhibition

Annotation:
ISY1-RAB43, ISY1-RAB43 readthrough (multiple annotations exist)
Organism:
Homo sapiens
Reporter:
GPL6244, 8001147 (ID_REF), GDS5085, NM_001204883, NM_001204884, NM_001204885, NM_001204886, NM_001204887, NM_001204888, NM_001204890, NM_198490, AY166852, BC062319, BC082988, chr16:46660316-46660750 (SPOT ID)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
112038327

GEO DataSets Gene Profile neighbors Chromosome neighbors

13.
Value/Rank Plot

RHO - Oncogenic BRAF harboring melanoma cell line response to BRAF inhibition

Annotation:
RHO, rhodopsin
Organism:
Homo sapiens
Reporter:
GPL6244, 8082552 (ID_REF), GDS5085, NM_000539, BC112104, BC112106, BX537381, chr3:129247482-129254187 (SPOT ID)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
112046415

GEO DataSets Gene Profile neighbors Chromosome neighbors Homologene neighbors

14.
Value/Rank Plot

RAB43 - Oncogenic BRAF harboring melanoma cell line response to BRAF inhibition

Annotation:
RAB43, RAB43, member RAS oncogene family
Organism:
Homo sapiens
Reporter:
GPL6244, 8090529 (ID_REF), GDS5085, NM_001204883, NM_001204884, NM_001204885, NM_001204887, NM_001204888, NM_198490, AY166852, BC062319, BC082988, chr3:128806418-128840625 (SPOT ID)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
112047170

GEO DataSets Gene Profile neighbors Chromosome neighbors Homologene neighbors

15.
Value/Rank Plot

H1FOO - Oncogenic BRAF harboring melanoma cell line response to BRAF inhibition

Annotation:
H1FOO, H1 histone family member O, oocyte specific
Organism:
Homo sapiens
Reporter:
GPL6244, 8082560 (ID_REF), GDS5085, NM_153833, XM_005247123, AY158091, BC047943, chr3:129262057-129270310 (SPOT ID)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
112046416

GEO DataSets Gene Profile neighbors Chromosome neighbors Homologene neighbors

16.
Value/Rank Plot

PLXND1 - Oncogenic BRAF harboring melanoma cell line response to BRAF inhibition

Annotation:
PLXND1, plexin D1
Organism:
Homo sapiens
Reporter:
GPL6244, 8090591 (ID_REF), GDS5085, NM_015103, AY116661, BC062465, BC150280, BC011848, chr3:129274018-129325661 (SPOT ID)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
112047178

GEO DataSets Gene Profile neighbors Chromosome neighbors Homologene neighbors

17.
Value/Rank Plot

GP9 - Oncogenic BRAF harboring melanoma cell line response to BRAF inhibition

Annotation:
GP9, glycoprotein IX platelet
Organism:
Homo sapiens
Reporter:
GPL6244, 8082473 (ID_REF), GDS5085, NM_000174, BC030229, X52997, chr3:128779602-128781251 (SPOT ID)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
112046410

GEO DataSets Gene Profile neighbors Chromosome neighbors Homologene neighbors

18.
Value/Rank Plot

TMCC1 - Oncogenic BRAF harboring melanoma cell line response to BRAF inhibition

Annotation:
TMCC1, transmembrane and coiled-coil domain family 1
Organism:
Homo sapiens
Reporter:
GPL6244, 8090630 (ID_REF), GDS5085, NM_001017395, NM_001128224, NR_033361, BC034284, BC039859, BX640712, chr3:129366635-129599309 (SPOT ID)
DataSet type:
Expression profiling by array, transformed count, 6 samples
ID:
112047179

GEO DataSets Gene Profile neighbors Chromosome neighbors Homologene neighbors

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