ProfileGDS2819 / 243529_at
TitleLeukemic white blood cells and various RNA preparation protocols
OrganismHomo sapiens


method A: lysis followed by lysate homogenization method B: organic solvent method C: organic solvent followed by purification patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 GSM187698 GSM187701 GSM187704 GSM187707 GSM187710 GSM187713 GSM187716 GSM187719 GSM187722 GSM187725 GSM187728 GSM187731 GSM187734 GSM187737 GSM187740 GSM187743 GSM187746 GSM187749 GSM187752 GSM187755 GSM187758 GSM187761 GSM187764 GSM187767 GSM187770 GSM187771 GSM187772 GSM187780 GSM187781 GSM187782 GSM187788 GSM187789 GSM187790 GSM187699 GSM187702 GSM187705 GSM187708 GSM187711 GSM187714 GSM187717 GSM187720 GSM187723 GSM187726 GSM187729 GSM187732 GSM187735 GSM187738 GSM187741 GSM187744 GSM187747 GSM187750 GSM187753 GSM187756 GSM187759 GSM187762 GSM187765 GSM187768 GSM187773 GSM187774 GSM187775 GSM187776 GSM187783 GSM187784 GSM187791 GSM187792 GSM187793 GSM187700 GSM187703 GSM187706 GSM187709 GSM187712 GSM187715 GSM187718 GSM187721 GSM187724 GSM187727 GSM187730 GSM187733 GSM187736 GSM187739 GSM187742 GSM187745 GSM187748 GSM187751 GSM187754 GSM187757 GSM187760 GSM187763 GSM187766 GSM187769 GSM187777 GSM187778 GSM187779 GSM187785 GSM187786 GSM187787 GSM187794 GSM187795 GSM187796 68% 55% 67% 52% 61% 59% 57% 50% 47% 69% 52% 39% 65% 46% 43% 72% 53% 69% 58% 56% 79% 55% 66% 48% 69% 62% 60% 57% 46% 57% 23% 54% 37% 64% 26% 64% 56% 51% 47% 60% 44% 28% 62% 55% 59% 41% 52% 43% 9% 53% 54% 44% 34% 66% 55% 55% 42% 60% 65% 49% 38% 34% 41% 40% 31% 32% 68% 46% 67% 64% 59% 61% 52% 12% 52% 60% 46% 46% 54% 29% 38% 70% 46% 68% 42% 58% 74% 55% 48% 40% 60% 57% 69% 44% 53% 47% 29% 28% 39% sort by protocol sort by individual sort by disease state Gene Expression Profile
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SampleTitleValueRank
GSM187698PAD_00232_sample 1_preparation A247.66968
GSM187701PAD_00233_sample 2_preparation A144.17755
GSM187704PAD_00234_sample 3_preparation A296.20767
GSM187707PAD_00331_sample 4_preparation A117.9752
GSM187710PAD_00236_sample 5_preparation A152.83361
GSM187713PAD_00237_sample 6_preparation A137.17159
GSM187716PAD_00238_sample 7_preparation A118.80357
GSM187719PAD_00239_sample 8_preparation A132.60350
GSM187722PAD_00256_sample 9_preparation A83.900947
GSM187725PAD_00257_sample 10_preparation A312.16569
GSM187728PAD_00258_sample 11_preparation A113.05952
GSM187731PAD_00259_sample 12_preparation A59.699339
GSM187734PAD_00260_sample 13_preparation A215.4565
GSM187737PAD_00261_sample 14_preparation A100.49546
GSM187740PAD_00262_sample 15_preparation A68.59943
GSM187743PAD_00263_sample 16_preparation A334.28472
GSM187746PAD_00280_sample 17_preparation A118.85353
GSM187749PAD_00281_sample 18_preparation A277.39769
GSM187752PAD_00282_sample 19_preparation A147.18258
GSM187755PAD_00283_sample 20_preparation A148.6356
GSM187758PAD_00284_sample 21_preparation A565.04579
GSM187761PAD_00285_sample 22_preparation A142.63155
GSM187764PAD_00286_sample 23_preparation A208.92366
GSM187767PAD_00287_sample 24_preparation A84.521748
GSM187770PAD_00304_sample 25_preparation A_replicate 1309.92369
GSM187771PAD_00305_sample 25_preparation A_replicate 2188.30462
GSM187772PAD_00306_sample 25_preparation A_replicate 3165.35560
GSM187780PAD_00313_sample 26_preparation A_replicate 1136.39357
GSM187781PAD_00314_sample 26_preparation A_replicate 284.871246
GSM187782PAD_00315_sample 26_preparation A_replicate 3122.05657
GSM187788PAD_00322_sample 27_preparation A_replicate 125.38523
GSM187789PAD_00323_sample 27_preparation A_replicate 2121.18654
GSM187790PAD_00324_sample 27_preparation A_replicate 364.44637
GSM187699PAD_00240_sample 1_preparation B207.01964
GSM187702PAD_00241_sample 2_preparation B31.711926
GSM187705PAD_00242_sample 3_preparation B252.79164
GSM187708PAD_00243_sample 4_preparation B147.96756
GSM187711PAD_00244_sample 5_preparation B117.25151
GSM187714PAD_00245_sample 6_preparation B96.797747
GSM187717PAD_00246_sample 7_preparation B170.4560
GSM187720PAD_00247_sample 8_preparation B103.87644
GSM187723PAD_00264_sample 9_preparation B51.523228
GSM187726PAD_00340_sample 10_preparation B303.63562
GSM187729PAD_00266_sample 11_preparation B153.17455
GSM187732PAD_00267_sample 12_preparation B185.31759
GSM187735PAD_00268_sample 13_preparation B76.403641
GSM187738PAD_00269_sample 14_preparation B151.7652
GSM187741PAD_00270_sample 15_preparation B89.250943
GSM187744PAD_00271_sample 16_preparation B19.34979
GSM187747PAD_00288_sample 17_preparation B144.6553
GSM187750PAD_00289_sample 18_preparation B131.00554
GSM187753PAD_00290_sample 19_preparation B89.373644
GSM187756PAD_00291_sample 20_preparation B59.59634
GSM187759PAD_00292_sample 21_preparation B255.65966
GSM187762PAD_00293_sample 22_preparation B156.34555
GSM187765PAD_00294_sample 23_preparation B121.99455
GSM187768PAD_00295_sample 24_preparation B72.862942
GSM187773PAD_00307_sample 25_preparation B_replicate 1200.50960
GSM187774PAD_00308_sample 25_preparation B_replicate 2278.32465
GSM187775PAD_00309_sample 25_preparation B_replicate 3116.91849
GSM187776PAD_00333_sample 25_preparation B_replicate 374.592638
GSM187783PAD_00316_sample 26_preparation B_replicate 156.221234
GSM187784PAD_00317_sample 26_preparation B_replicate 284.252341
GSM187791PAD_00325_sample 27_preparation B_replicate 176.263840
GSM187792PAD_00326_sample 27_preparation B_replicate 245.667431
GSM187793PAD_00327_sample 27_preparation B_replicate 349.335832
GSM187700PAD_00248_sample 1_preparation C274.77868
GSM187703PAD_00249_sample 2_preparation C89.409946
GSM187706PAD_00250_sample 3_preparation C302.48867
GSM187709PAD_00251_sample 4_preparation C239.63364
GSM187712PAD_00252_sample 5_preparation C168.87359
GSM187715PAD_00253_sample 6_preparation C200.35761
GSM187718PAD_00254_sample 7_preparation C116.70952
GSM187721PAD_00255_sample 8_preparation C13.659412
GSM187724PAD_00272_sample 9_preparation C130.53152
GSM187727PAD_00273_sample 10_preparation C194.98360
GSM187730PAD_00274_sample 11_preparation C82.735146
GSM187733PAD_00275_sample 12_preparation C79.960746
GSM187736PAD_00276_sample 13_preparation C126.16254
GSM187739PAD_00277_sample 14_preparation C43.8729
GSM187742PAD_00278_sample 15_preparation C63.515538
GSM187745PAD_00279_sample 16_preparation C335.15770
GSM187748PAD_00296_sample 17_preparation C86.084746
GSM187751PAD_00297_sample 18_preparation C301.05868
GSM187754PAD_00298_sample 19_preparation C75.233942
GSM187757PAD_00299_sample 20_preparation C136.01358
GSM187760PAD_00300_sample 21_preparation C398.59874
GSM187763PAD_00301_sample 22_preparation C145.79655
GSM187766PAD_00302_sample 23_preparation C89.448
GSM187769PAD_00303_sample 24_preparation C78.145940
GSM187777PAD_00310_sample 25_preparation C_replicate 1177.11360
GSM187778PAD_00311_sample 25_preparation C_replicate 2155.29557
GSM187779PAD_00332_sample 25_preparation C_replicate 3311.50569
GSM187785PAD_00320_sample 26_preparation C_replicate 184.777544
GSM187786PAD_00321_sample 26_preparation C_replicate 2119.75953
GSM187787PAD_00319_sample 26_preparation C_replicate 394.35547
GSM187794PAD_00328_sample 27_preparation C_replicate 137.161929
GSM187795PAD_00329_sample 27_preparation C_replicate 242.11928
GSM187796PAD_00330_sample 27_preparation C_replicate 366.250639