ProfileGDS2819 / 239058_at
TitleLeukemic white blood cells and various RNA preparation protocols
OrganismHomo sapiens


method A: lysis followed by lysate homogenization method B: organic solvent method C: organic solvent followed by purification patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 GSM187698 GSM187701 GSM187704 GSM187707 GSM187710 GSM187713 GSM187716 GSM187719 GSM187722 GSM187725 GSM187728 GSM187731 GSM187734 GSM187737 GSM187740 GSM187743 GSM187746 GSM187749 GSM187752 GSM187755 GSM187758 GSM187761 GSM187764 GSM187767 GSM187770 GSM187771 GSM187772 GSM187780 GSM187781 GSM187782 GSM187788 GSM187789 GSM187790 GSM187699 GSM187702 GSM187705 GSM187708 GSM187711 GSM187714 GSM187717 GSM187720 GSM187723 GSM187726 GSM187729 GSM187732 GSM187735 GSM187738 GSM187741 GSM187744 GSM187747 GSM187750 GSM187753 GSM187756 GSM187759 GSM187762 GSM187765 GSM187768 GSM187773 GSM187774 GSM187775 GSM187776 GSM187783 GSM187784 GSM187791 GSM187792 GSM187793 GSM187700 GSM187703 GSM187706 GSM187709 GSM187712 GSM187715 GSM187718 GSM187721 GSM187724 GSM187727 GSM187730 GSM187733 GSM187736 GSM187739 GSM187742 GSM187745 GSM187748 GSM187751 GSM187754 GSM187757 GSM187760 GSM187763 GSM187766 GSM187769 GSM187777 GSM187778 GSM187779 GSM187785 GSM187786 GSM187787 GSM187794 GSM187795 GSM187796 53% 57% 43% 33% 17% 52% 40% 60% 42% 18% 35% 53% 54% 21% 37% 53% 77% 46% 18% 38% 29% 60% 56% 19% 56% 48% 39% 53% 46% 26% 56% 27% 24% 34% 36% 50% 31% 22% 58% 49% 57% 54% 46% 22% 33% 31% 57% 44% 66% 83% 59% 52% 53% 46% 47% 22% 26% 45% 52% 17% 58% 51% 45% 27% 22% 28% 59% 49% 24% 53% 23% 60% 55% 20% 47% 38% 14% 35% 31% 48% 24% 15% 84% 42% 48% 51% 37% 68% 48% 45% 62% 52% 54% 67% 35% 57% 44% 19% 47% sort by protocol sort by individual sort by disease state Gene Expression Profile
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SampleTitleValueRank
GSM187698PAD_00232_sample 1_preparation A115.65853
GSM187701PAD_00233_sample 2_preparation A157.27557
GSM187704PAD_00234_sample 3_preparation A105.49443
GSM187707PAD_00331_sample 4_preparation A50.101233
GSM187710PAD_00236_sample 5_preparation A11.851617
GSM187713PAD_00237_sample 6_preparation A97.501852
GSM187716PAD_00238_sample 7_preparation A57.377240
GSM187719PAD_00239_sample 8_preparation A196.66560
GSM187722PAD_00256_sample 9_preparation A66.302242
GSM187725PAD_00257_sample 10_preparation A17.352118
GSM187728PAD_00258_sample 11_preparation A50.816235
GSM187731PAD_00259_sample 12_preparation A106.82553
GSM187734PAD_00260_sample 13_preparation A125.21854
GSM187737PAD_00261_sample 14_preparation A27.055621
GSM187740PAD_00262_sample 15_preparation A54.188737
GSM187743PAD_00263_sample 16_preparation A89.0953
GSM187746PAD_00280_sample 17_preparation A520.23277
GSM187749PAD_00281_sample 18_preparation A84.492946
GSM187752PAD_00282_sample 19_preparation A17.39718
GSM187755PAD_00283_sample 20_preparation A71.782838
GSM187758PAD_00284_sample 21_preparation A32.683729
GSM187761PAD_00285_sample 22_preparation A179.12660
GSM187764PAD_00286_sample 23_preparation A127.97956
GSM187767PAD_00287_sample 24_preparation A15.887819
GSM187770PAD_00304_sample 25_preparation A_replicate 1144.30656
GSM187771PAD_00305_sample 25_preparation A_replicate 299.805448
GSM187772PAD_00306_sample 25_preparation A_replicate 365.641139
GSM187780PAD_00313_sample 26_preparation A_replicate 1111.96153
GSM187781PAD_00314_sample 26_preparation A_replicate 285.258646
GSM187782PAD_00315_sample 26_preparation A_replicate 326.810526
GSM187788PAD_00322_sample 27_preparation A_replicate 1134.68956
GSM187789PAD_00323_sample 27_preparation A_replicate 234.417827
GSM187790PAD_00324_sample 27_preparation A_replicate 329.289424
GSM187699PAD_00240_sample 1_preparation B48.890934
GSM187702PAD_00241_sample 2_preparation B56.05936
GSM187705PAD_00242_sample 3_preparation B111.03850
GSM187708PAD_00243_sample 4_preparation B46.502431
GSM187711PAD_00244_sample 5_preparation B22.640622
GSM187714PAD_00245_sample 6_preparation B156.35258
GSM187717PAD_00246_sample 7_preparation B103.88849
GSM187720PAD_00247_sample 8_preparation B177.24457
GSM187723PAD_00264_sample 9_preparation B162.29554
GSM187726PAD_00340_sample 10_preparation B163.80746
GSM187729PAD_00266_sample 11_preparation B23.881122
GSM187732PAD_00267_sample 12_preparation B54.844633
GSM187735PAD_00268_sample 13_preparation B45.6831
GSM187738PAD_00269_sample 14_preparation B183.38757
GSM187741PAD_00270_sample 15_preparation B94.616344
GSM187744PAD_00271_sample 16_preparation B326.28866
GSM187747PAD_00288_sample 17_preparation B874.97883
GSM187750PAD_00289_sample 18_preparation B174.49259
GSM187753PAD_00290_sample 19_preparation B130.73452
GSM187756PAD_00291_sample 20_preparation B131.36653
GSM187759PAD_00292_sample 21_preparation B97.568246
GSM187762PAD_00293_sample 22_preparation B109.53547
GSM187765PAD_00294_sample 23_preparation B21.029722
GSM187768PAD_00295_sample 24_preparation B30.88126
GSM187773PAD_00307_sample 25_preparation B_replicate 1103.45745
GSM187774PAD_00308_sample 25_preparation B_replicate 2149.68352
GSM187775PAD_00309_sample 25_preparation B_replicate 318.833417
GSM187776PAD_00333_sample 25_preparation B_replicate 3175.57758
GSM187783PAD_00316_sample 26_preparation B_replicate 1118.05151
GSM187784PAD_00317_sample 26_preparation B_replicate 299.340545
GSM187791PAD_00325_sample 27_preparation B_replicate 138.136227
GSM187792PAD_00326_sample 27_preparation B_replicate 224.674122
GSM187793PAD_00327_sample 27_preparation B_replicate 337.247128
GSM187700PAD_00248_sample 1_preparation C172.78959
GSM187703PAD_00249_sample 2_preparation C100.83649
GSM187706PAD_00250_sample 3_preparation C35.056724
GSM187709PAD_00251_sample 4_preparation C143.48753
GSM187712PAD_00252_sample 5_preparation C25.741423
GSM187715PAD_00253_sample 6_preparation C186.10960
GSM187718PAD_00254_sample 7_preparation C128.00155
GSM187721PAD_00255_sample 8_preparation C24.396820
GSM187724PAD_00272_sample 9_preparation C104.94647
GSM187727PAD_00273_sample 10_preparation C63.600638
GSM187730PAD_00274_sample 11_preparation C11.136514
GSM187733PAD_00275_sample 12_preparation C48.918335
GSM187736PAD_00276_sample 13_preparation C44.115331
GSM187739PAD_00277_sample 14_preparation C112.51848
GSM187742PAD_00278_sample 15_preparation C27.935624
GSM187745PAD_00279_sample 16_preparation C11.821515
GSM187748PAD_00296_sample 17_preparation C945.43884
GSM187751PAD_00297_sample 18_preparation C64.007142
GSM187754PAD_00298_sample 19_preparation C95.694448
GSM187757PAD_00299_sample 20_preparation C97.949951
GSM187760PAD_00300_sample 21_preparation C55.295537
GSM187763PAD_00301_sample 22_preparation C309.668
GSM187766PAD_00302_sample 23_preparation C86.957348
GSM187769PAD_00303_sample 24_preparation C95.643245
GSM187777PAD_00310_sample 25_preparation C_replicate 1200.0362
GSM187778PAD_00311_sample 25_preparation C_replicate 2120.53152
GSM187779PAD_00332_sample 25_preparation C_replicate 3151.46254
GSM187785PAD_00320_sample 26_preparation C_replicate 1240.65767
GSM187786PAD_00321_sample 26_preparation C_replicate 255.241435
GSM187787PAD_00319_sample 26_preparation C_replicate 3144.85457
GSM187794PAD_00328_sample 27_preparation C_replicate 180.755144
GSM187795PAD_00329_sample 27_preparation C_replicate 223.312319
GSM187796PAD_00330_sample 27_preparation C_replicate 394.057247