ProfileGDS2819 / 235296_at
TitleLeukemic white blood cells and various RNA preparation protocols
OrganismHomo sapiens


method A: lysis followed by lysate homogenization method B: organic solvent method C: organic solvent followed by purification patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 GSM187698 GSM187701 GSM187704 GSM187707 GSM187710 GSM187713 GSM187716 GSM187719 GSM187722 GSM187725 GSM187728 GSM187731 GSM187734 GSM187737 GSM187740 GSM187743 GSM187746 GSM187749 GSM187752 GSM187755 GSM187758 GSM187761 GSM187764 GSM187767 GSM187770 GSM187771 GSM187772 GSM187780 GSM187781 GSM187782 GSM187788 GSM187789 GSM187790 GSM187699 GSM187702 GSM187705 GSM187708 GSM187711 GSM187714 GSM187717 GSM187720 GSM187723 GSM187726 GSM187729 GSM187732 GSM187735 GSM187738 GSM187741 GSM187744 GSM187747 GSM187750 GSM187753 GSM187756 GSM187759 GSM187762 GSM187765 GSM187768 GSM187773 GSM187774 GSM187775 GSM187776 GSM187783 GSM187784 GSM187791 GSM187792 GSM187793 GSM187700 GSM187703 GSM187706 GSM187709 GSM187712 GSM187715 GSM187718 GSM187721 GSM187724 GSM187727 GSM187730 GSM187733 GSM187736 GSM187739 GSM187742 GSM187745 GSM187748 GSM187751 GSM187754 GSM187757 GSM187760 GSM187763 GSM187766 GSM187769 GSM187777 GSM187778 GSM187779 GSM187785 GSM187786 GSM187787 GSM187794 GSM187795 GSM187796 9% 18% 68% 1% 51% 34% 5% 65% 28% 68% 14% 29% 31% 19% 26% 51% 25% 65% 1% 46% 69% 7% 27% 41% 71% 71% 70% 52% 42% 34% 29% 40% 40% 49% 30% 71% 25% 36% 22% 37% 60% 27% 42% 17% 20% 6% 4% 2% 52% 39% 61% 32% 39% 63% 43% 34% 29% 64% 65% 68% 49% 50% 48% 29% 24% 3% 47% 32% 68% 49% 48% 27% 30% 43% 26% 60% 47% 34% 27% 1% 1% 55% 5% 63% 35% 35% 68% 8% 17% 19% 71% 67% 69% 45% 35% 39% 2% 19% 24% sort by protocol sort by individual sort by disease state Gene Expression Profile
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SampleTitleValueRank
GSM187698PAD_00232_sample 1_preparation A12.99229
GSM187701PAD_00233_sample 2_preparation A24.057518
GSM187704PAD_00234_sample 3_preparation A320.95768
GSM187707PAD_00331_sample 4_preparation A2.560821
GSM187710PAD_00236_sample 5_preparation A84.64251
GSM187713PAD_00237_sample 6_preparation A42.038234
GSM187716PAD_00238_sample 7_preparation A4.809925
GSM187719PAD_00239_sample 8_preparation A244.72265
GSM187722PAD_00256_sample 9_preparation A34.176928
GSM187725PAD_00257_sample 10_preparation A279.69668
GSM187728PAD_00258_sample 11_preparation A11.698314
GSM187731PAD_00259_sample 12_preparation A33.32329
GSM187734PAD_00260_sample 13_preparation A45.91431
GSM187737PAD_00261_sample 14_preparation A24.094219
GSM187740PAD_00262_sample 15_preparation A28.043226
GSM187743PAD_00263_sample 16_preparation A80.024851
GSM187746PAD_00280_sample 17_preparation A30.744925
GSM187749PAD_00281_sample 18_preparation A205.70865
GSM187752PAD_00282_sample 19_preparation A2.161131
GSM187755PAD_00283_sample 20_preparation A100.62546
GSM187758PAD_00284_sample 21_preparation A260.54269
GSM187761PAD_00285_sample 22_preparation A8.610197
GSM187764PAD_00286_sample 23_preparation A32.385327
GSM187767PAD_00287_sample 24_preparation A62.073541
GSM187770PAD_00304_sample 25_preparation A_replicate 1342.00771
GSM187771PAD_00305_sample 25_preparation A_replicate 2350.76471
GSM187772PAD_00306_sample 25_preparation A_replicate 3308.38170
GSM187780PAD_00313_sample 26_preparation A_replicate 1106.53852
GSM187781PAD_00314_sample 26_preparation A_replicate 271.257942
GSM187782PAD_00315_sample 26_preparation A_replicate 345.147934
GSM187788PAD_00322_sample 27_preparation A_replicate 139.794529
GSM187789PAD_00323_sample 27_preparation A_replicate 271.357540
GSM187790PAD_00324_sample 27_preparation A_replicate 374.503140
GSM187699PAD_00240_sample 1_preparation B98.954249
GSM187702PAD_00241_sample 2_preparation B40.713430
GSM187705PAD_00242_sample 3_preparation B400.49771
GSM187708PAD_00243_sample 4_preparation B30.343325
GSM187711PAD_00244_sample 5_preparation B56.42136
GSM187714PAD_00245_sample 6_preparation B23.795322
GSM187717PAD_00246_sample 7_preparation B61.48837
GSM187720PAD_00247_sample 8_preparation B200.40260
GSM187723PAD_00264_sample 9_preparation B47.969127
GSM187726PAD_00340_sample 10_preparation B138.10142
GSM187729PAD_00266_sample 11_preparation B16.070217
GSM187732PAD_00267_sample 12_preparation B25.379120
GSM187735PAD_00268_sample 13_preparation B6.5286
GSM187738PAD_00269_sample 14_preparation B8.078834
GSM187741PAD_00270_sample 15_preparation B4.63042
GSM187744PAD_00271_sample 16_preparation B187.42252
GSM187747PAD_00288_sample 17_preparation B80.568739
GSM187750PAD_00289_sample 18_preparation B194.6261
GSM187753PAD_00290_sample 19_preparation B51.18632
GSM187756PAD_00291_sample 20_preparation B72.895139
GSM187759PAD_00292_sample 21_preparation B215.29863
GSM187762PAD_00293_sample 22_preparation B92.034243
GSM187765PAD_00294_sample 23_preparation B46.52434
GSM187768PAD_00295_sample 24_preparation B37.877329
GSM187773PAD_00307_sample 25_preparation B_replicate 1246.75864
GSM187774PAD_00308_sample 25_preparation B_replicate 2275.55865
GSM187775PAD_00309_sample 25_preparation B_replicate 3309.67368
GSM187776PAD_00333_sample 25_preparation B_replicate 3121.17749
GSM187783PAD_00316_sample 26_preparation B_replicate 1111.71350
GSM187784PAD_00317_sample 26_preparation B_replicate 2111.66448
GSM187791PAD_00325_sample 27_preparation B_replicate 142.42729
GSM187792PAD_00326_sample 27_preparation B_replicate 230.209224
GSM187793PAD_00327_sample 27_preparation B_replicate 34.521543
GSM187700PAD_00248_sample 1_preparation C102.88147
GSM187703PAD_00249_sample 2_preparation C45.428532
GSM187706PAD_00250_sample 3_preparation C311.73268
GSM187709PAD_00251_sample 4_preparation C117.94649
GSM187712PAD_00252_sample 5_preparation C98.199148
GSM187715PAD_00253_sample 6_preparation C41.31127
GSM187718PAD_00254_sample 7_preparation C41.536330
GSM187721PAD_00255_sample 8_preparation C87.276543
GSM187724PAD_00272_sample 9_preparation C35.063326
GSM187727PAD_00273_sample 10_preparation C187.83760
GSM187730PAD_00274_sample 11_preparation C87.266247
GSM187733PAD_00275_sample 12_preparation C46.927434
GSM187736PAD_00276_sample 13_preparation C35.145427
GSM187739PAD_00277_sample 14_preparation C2.881041
GSM187742PAD_00278_sample 15_preparation C2.235271
GSM187745PAD_00279_sample 16_preparation C121.62255
GSM187748PAD_00296_sample 17_preparation C5.339355
GSM187751PAD_00297_sample 18_preparation C206.43263
GSM187754PAD_00298_sample 19_preparation C52.899635
GSM187757PAD_00299_sample 20_preparation C46.671635
GSM187760PAD_00300_sample 21_preparation C261.51968
GSM187763PAD_00301_sample 22_preparation C9.042958
GSM187766PAD_00302_sample 23_preparation C16.288117
GSM187769PAD_00303_sample 24_preparation C21.357519
GSM187777PAD_00310_sample 25_preparation C_replicate 1348.05171
GSM187778PAD_00311_sample 25_preparation C_replicate 2270.31867
GSM187779PAD_00332_sample 25_preparation C_replicate 3308.91669
GSM187785PAD_00320_sample 26_preparation C_replicate 189.425845
GSM187786PAD_00321_sample 26_preparation C_replicate 253.991435
GSM187787PAD_00319_sample 26_preparation C_replicate 366.3239
GSM187794PAD_00328_sample 27_preparation C_replicate 14.347592
GSM187795PAD_00329_sample 27_preparation C_replicate 222.611119
GSM187796PAD_00330_sample 27_preparation C_replicate 328.194924