ProfileGDS2819 / 230997_at
TitleLeukemic white blood cells and various RNA preparation protocols
OrganismHomo sapiens


method A: lysis followed by lysate homogenization method B: organic solvent method C: organic solvent followed by purification patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 patient 1 patient 2 patient 3 patient 4 patient 5 patient 6 patient 7 patient 8 patient 9 patient 10 patient 11 patient 12 patient 13 patient 14 patient 15 patient 16 patient 17 patient 18 patient 19 patient 20 patient 21 patient 22 patient 23 patient 24 patient 25 patient 26 patient 27 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 Pro-B-ALL with t 11q23, MLL c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with t 1, 19 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL with t 9,22 AML with normal karyotype and other abnormalities c-ALL, Pre-B-ALL with t 9,22 T-ALL ALL with t 12, 21 ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 ALL with t 12, 21 AML with t 11q23, MLL T-ALL ALL with hyperdiploid karyotype c-ALL, Pre-B-ALL without t 9,22 T-ALL c-ALL, Pre-B-ALL without t 9,22 AML with normal karyotype and other abnormalities AML with t 11q23, MLL c-ALL, Pre-B-ALL without t 9,22 GSM187698 GSM187701 GSM187704 GSM187707 GSM187710 GSM187713 GSM187716 GSM187719 GSM187722 GSM187725 GSM187728 GSM187731 GSM187734 GSM187737 GSM187740 GSM187743 GSM187746 GSM187749 GSM187752 GSM187755 GSM187758 GSM187761 GSM187764 GSM187767 GSM187770 GSM187771 GSM187772 GSM187780 GSM187781 GSM187782 GSM187788 GSM187789 GSM187790 GSM187699 GSM187702 GSM187705 GSM187708 GSM187711 GSM187714 GSM187717 GSM187720 GSM187723 GSM187726 GSM187729 GSM187732 GSM187735 GSM187738 GSM187741 GSM187744 GSM187747 GSM187750 GSM187753 GSM187756 GSM187759 GSM187762 GSM187765 GSM187768 GSM187773 GSM187774 GSM187775 GSM187776 GSM187783 GSM187784 GSM187791 GSM187792 GSM187793 GSM187700 GSM187703 GSM187706 GSM187709 GSM187712 GSM187715 GSM187718 GSM187721 GSM187724 GSM187727 GSM187730 GSM187733 GSM187736 GSM187739 GSM187742 GSM187745 GSM187748 GSM187751 GSM187754 GSM187757 GSM187760 GSM187763 GSM187766 GSM187769 GSM187777 GSM187778 GSM187779 GSM187785 GSM187786 GSM187787 GSM187794 GSM187795 GSM187796 60% 79% 43% 85% 81% 77% 70% 47% 59% 64% 79% 69% 79% 78% 76% 45% 12% 40% 77% 67% 48% 70% 68% 84% 49% 61% 59% 60% 67% 64% 78% 84% 80% 66% 73% 57% 82% 81% 75% 69% 57% 33% 56% 79% 56% 77% 80% 75% 27% 39% 48% 81% 68% 19% 76% 65% 84% 32% 58% 24% 53% 61% 67% 82% 82% 81% 66% 72% 62% 86% 80% 71% 71% 26% 39% 58% 78% 71% 78% 79% 76% 20% 19% 29% 78% 73% 10% 76% 64% 84% 48% 59% 58% 68% 56% 62% 78% 81% 81% sort by protocol sort by individual sort by disease state Gene Expression Profile
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SampleTitleValueRank
GSM187698PAD_00232_sample 1_preparation A161.35760
GSM187701PAD_00233_sample 2_preparation A557.08479
GSM187704PAD_00234_sample 3_preparation A105.39443
GSM187707PAD_00331_sample 4_preparation A964.08785
GSM187710PAD_00236_sample 5_preparation A746.94981
GSM187713PAD_00237_sample 6_preparation A450.67677
GSM187716PAD_00238_sample 7_preparation A245.17570
GSM187719PAD_00239_sample 8_preparation A121.92247
GSM187722PAD_00256_sample 9_preparation A152.17159
GSM187725PAD_00257_sample 10_preparation A221.64964
GSM187728PAD_00258_sample 11_preparation A669.66679
GSM187731PAD_00259_sample 12_preparation A253.29169
GSM187734PAD_00260_sample 13_preparation A568.89879
GSM187737PAD_00261_sample 14_preparation A547.25578
GSM187740PAD_00262_sample 15_preparation A494.47776
GSM187743PAD_00263_sample 16_preparation A61.511945
GSM187746PAD_00280_sample 17_preparation A12.14412
GSM187749PAD_00281_sample 18_preparation A6440
GSM187752PAD_00282_sample 19_preparation A532.08777
GSM187755PAD_00283_sample 20_preparation A252.44267
GSM187758PAD_00284_sample 21_preparation A78.859448
GSM187761PAD_00285_sample 22_preparation A326.9970
GSM187764PAD_00286_sample 23_preparation A243.49168
GSM187767PAD_00287_sample 24_preparation A982.72284
GSM187770PAD_00304_sample 25_preparation A_replicate 1102.61249
GSM187771PAD_00305_sample 25_preparation A_replicate 2179.99761
GSM187772PAD_00306_sample 25_preparation A_replicate 3163.66459
GSM187780PAD_00313_sample 26_preparation A_replicate 1158.92960
GSM187781PAD_00314_sample 26_preparation A_replicate 2230.8467
GSM187782PAD_00315_sample 26_preparation A_replicate 3187.30764
GSM187788PAD_00322_sample 27_preparation A_replicate 1560.77878
GSM187789PAD_00323_sample 27_preparation A_replicate 2874.03184
GSM187790PAD_00324_sample 27_preparation A_replicate 3617.31780
GSM187699PAD_00240_sample 1_preparation B236.02466
GSM187702PAD_00241_sample 2_preparation B417.89173
GSM187705PAD_00242_sample 3_preparation B162.50157
GSM187708PAD_00243_sample 4_preparation B821.49782
GSM187711PAD_00244_sample 5_preparation B811.05381
GSM187714PAD_00245_sample 6_preparation B459.20875
GSM187717PAD_00246_sample 7_preparation B277.75269
GSM187720PAD_00247_sample 8_preparation B173.37157
GSM187723PAD_00264_sample 9_preparation B67.245333
GSM187726PAD_00340_sample 10_preparation B242.15356
GSM187729PAD_00266_sample 11_preparation B686.71379
GSM187732PAD_00267_sample 12_preparation B157.2356
GSM187735PAD_00268_sample 13_preparation B548.14477
GSM187738PAD_00269_sample 14_preparation B687.58380
GSM187741PAD_00270_sample 15_preparation B494.68275
GSM187744PAD_00271_sample 16_preparation B56.878527
GSM187747PAD_00288_sample 17_preparation B81.516139
GSM187750PAD_00289_sample 18_preparation B99.142848
GSM187753PAD_00290_sample 19_preparation B808.65681
GSM187756PAD_00291_sample 20_preparation B272.77368
GSM187759PAD_00292_sample 21_preparation B21.923319
GSM187762PAD_00293_sample 22_preparation B537.5276
GSM187765PAD_00294_sample 23_preparation B220.1265
GSM187768PAD_00295_sample 24_preparation B967.18984
GSM187773PAD_00307_sample 25_preparation B_replicate 155.875632
GSM187774PAD_00308_sample 25_preparation B_replicate 2189.61558
GSM187775PAD_00309_sample 25_preparation B_replicate 330.719624
GSM187776PAD_00333_sample 25_preparation B_replicate 3140.51653
GSM187783PAD_00316_sample 26_preparation B_replicate 1175.73861
GSM187784PAD_00317_sample 26_preparation B_replicate 2270.38567
GSM187791PAD_00325_sample 27_preparation B_replicate 1763.22382
GSM187792PAD_00326_sample 27_preparation B_replicate 2762.73482
GSM187793PAD_00327_sample 27_preparation B_replicate 3740.39381
GSM187700PAD_00248_sample 1_preparation C250.51766
GSM187703PAD_00249_sample 2_preparation C374.42772
GSM187706PAD_00250_sample 3_preparation C231.24762
GSM187709PAD_00251_sample 4_preparation C1070.2886
GSM187712PAD_00252_sample 5_preparation C759.15980
GSM187715PAD_00253_sample 6_preparation C344.15371
GSM187718PAD_00254_sample 7_preparation C294.66971
GSM187721PAD_00255_sample 8_preparation C34.716226
GSM187724PAD_00272_sample 9_preparation C73.925739
GSM187727PAD_00273_sample 10_preparation C175.82358
GSM187730PAD_00274_sample 11_preparation C595.5578
GSM187733PAD_00275_sample 12_preparation C324.83971
GSM187736PAD_00276_sample 13_preparation C587.08678
GSM187739PAD_00277_sample 14_preparation C627.7379
GSM187742PAD_00278_sample 15_preparation C523.63776
GSM187745PAD_00279_sample 16_preparation C17.721720
GSM187748PAD_00296_sample 17_preparation C19.18919
GSM187751PAD_00297_sample 18_preparation C32.63629
GSM187754PAD_00298_sample 19_preparation C620.10178
GSM187757PAD_00299_sample 20_preparation C346.74573
GSM187760PAD_00300_sample 21_preparation C9.5577410
GSM187763PAD_00301_sample 22_preparation C519.27776
GSM187766PAD_00302_sample 23_preparation C197.11864
GSM187769PAD_00303_sample 24_preparation C956.26484
GSM187777PAD_00310_sample 25_preparation C_replicate 199.830448
GSM187778PAD_00311_sample 25_preparation C_replicate 2166.81759
GSM187779PAD_00332_sample 25_preparation C_replicate 3176.89558
GSM187785PAD_00320_sample 26_preparation C_replicate 1263.45468
GSM187786PAD_00321_sample 26_preparation C_replicate 2135.29556
GSM187787PAD_00319_sample 26_preparation C_replicate 3178.69962
GSM187794PAD_00328_sample 27_preparation C_replicate 1569.98378
GSM187795PAD_00329_sample 27_preparation C_replicate 2667.63281
GSM187796PAD_00330_sample 27_preparation C_replicate 3690.07381